mRNA_P-littoralis_Contig85.14.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig85.14.1
Unique NamemRNA_P-littoralis_Contig85.14.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: D8LRM6_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRM6_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 4.640e-50
Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 1
Query:  715 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFSTA 978
            MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFE LYPSLWHCFVGRNFGC+VTHEHTKFVYLYIGQ+GVCLFSTA
Sbjct:    1 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A836CI24_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI24_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.390e-40
Identity = 70/88 (79.55%), Postives = 80/88 (90.91%), Query Frame = 1
Query:  715 MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFSTA 978
            MSARPVIKTSTM  DMQEAAIQVAQDAI+DNNLEK+IA+A+K  FE +YPS+WHCFVGRNFG +VTHE +KF+Y YIGQ+GVCLFSTA
Sbjct:    1 MSARPVIKTSTMPADMQEAAIQVAQDAIKDNNLEKEIAHAIKTNFERIYPSVWHCFVGRNFGSFVTHEQSKFIYFYIGQMGVCLFSTA 88          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A7S1UG18_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG18_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.110e-29
Identity = 56/92 (60.87%), Postives = 73/92 (79.35%), Query Frame = 1
Query:  703 GGGTMSARP-VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFST 975
            G  TM+ R  V+K S M  +MQ+AA+Q+AQDAIR++  E++IA+A+K  FES+Y + WHCFVGRNFGCYVTH+   FVY YIGQLG+CLF+T
Sbjct:   31 GSATMAPRGIVVKASRMEQEMQDAAVQIAQDAIREHMTEQEIASAIKQQFESIYHTTWHCFVGRNFGCYVTHQENAFVYFYIGQLGICLFAT 122          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A7S2STQ1_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STQ1_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.690e-29
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 1
Query:  703 GGGTMSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFSTA 978
            G   M+ARPVIK S+M PDMQE AIQ AQDAI   N E++IA A++   E+++P+ WH  VGRNFGC+VTHE +KF+Y YIGQ+GVC+F+TA
Sbjct:   25 GPEKMAARPVIKHSSMTPDMQEMAIQCAQDAIAAKNTEQEIAMAIRQNIETMFPATWHVLVGRNFGCFVTHEASKFIYFYIGQVGVCMFATA 116          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A7S1C452_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C452_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.070e-23
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 1
Query:  691 LPWLGG----GTMSARP-------VIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFST 975
            L W+ G     TMS +        ++K + M   M E AI VA  AI+  N EK+ A+A+KA  E+L+P +WHCFVGR FGCYVTHE +KF+Y Y+GQLGVCLFS+
Sbjct:   71 LAWVSGRAPPATMSDKKTFKLNGAIVKLNQMETVMAERAIDVALRAIKSCNTEKETASAIKAQMEALFPGVWHCFVGRKFGCYVTHESSKFIYFYVGQLGVCLFSS 176          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: K3WKC4_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC4_GLOUD)

HSP 1 Score: 96.7 bits (239), Expect = 1.470e-20
Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 1
Query:  718 SARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPS-LWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFSTA 978
            + +PV+KTSTM PD+Q+  I VAQ A+     E+ IA  VK  FE  Y   LWHC VGRN  CYVTHE +KF+Y YIGQ+ V LF+TA
Sbjct:    3 NVKPVVKTSTMDPDLQDEVILVAQHAMDTEIDEQQIAAKVKQHFEQKYHGMLWHCCVGRNVACYVTHEQSKFLYFYIGQMAVVLFATA 90          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A0R3WWJ5_HYDTA (Dynein light chain n=2 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WWJ5_HYDTA)

HSP 1 Score: 96.7 bits (239), Expect = 2.610e-20
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  724 RPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFST 975
            + V+K + MA DMQ+ A+  AQDA+   N+EKDIA  +K  F+ LY   WHC VGRNFG YVTHE   F+Y Y+GQ+ + LF +
Sbjct:   26 KAVVKNADMAEDMQQRAVDCAQDAMNKYNVEKDIAAHIKKEFDRLYSPTWHCIVGRNFGSYVTHETKHFIYFYMGQVAILLFKS 109          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: U4LB13_PYROM (Dynein light chain n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LB13_PYROM)

HSP 1 Score: 96.3 bits (238), Expect = 3.090e-20
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  706 GGTMSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFSTA 978
            G +   +  +K+  MA DM  AA +VA+ A+++NN+EKDIA  +K  F++ Y + WHC VGRNFG +VTHE   F+Y Y+G L V L+ TA
Sbjct:   15 GDSAELKTTVKSVDMAEDMAAAAQEVAKKAMKENNVEKDIAQMIKKEFDAKYGNTWHCIVGRNFGSFVTHETKHFIYFYVGNLAVLLYKTA 105          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A0R3WU97_HYDTA (Dynein light chain n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WU97_HYDTA)

HSP 1 Score: 94.7 bits (234), Expect = 7.610e-20
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  724 RPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFST 975
            + VIK + M  +MQ+ A+  AQDA+   N+EKDIA  +K  F+ LY   WHC VGRNFG YVTHE   F+Y Y+GQ+ + LF +
Sbjct:    9 KAVIKNADMVDEMQQRAVDCAQDAMEKFNIEKDIAAHIKKEFDKLYSPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKS 92          
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Match: A0A0R3WYJ9_HYDTA (Dynein light chain n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WYJ9_HYDTA)

HSP 1 Score: 94.4 bits (233), Expect = 1.040e-19
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1
Query:  718 SARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYPSLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFST 975
            S + VIK + M+ +MQ+ A+  AQDA+   N+EKDIA  +K  F+ +Y   WHC VGRNFG YVTHE   F+Y Y+GQ+ + LF +
Sbjct:    7 SQKAVIKNADMSEEMQQKAVDCAQDAMEKFNIEKDIAAHIKKEFDRMYNPTWHCIVGRNFGSYVTHETKHFIYFYMGQVAILLFKS 92          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM6_ECTSI4.640e-5096.59Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A836CI24_9STRA3.390e-4079.55Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S1UG18_9STRA1.110e-2960.87Dynein light chain n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S2STQ1_9STRA1.690e-2960.87Dynein light chain n=1 Tax=Rhizochromulina marina ... [more]
A0A7S1C452_9STRA1.070e-2350.94Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014... [more]
K3WKC4_GLOUD1.470e-2055.68Dynein light chain n=1 Tax=Globisporangium ultimum... [more]
A0A0R3WWJ5_HYDTA2.610e-2051.19Dynein light chain n=2 Tax=Hydatigena taeniaeformi... [more]
U4LB13_PYROM3.090e-2047.25Dynein light chain n=1 Tax=Pyronema omphalodes (st... [more]
A0A0R3WU97_HYDTA7.610e-2050.00Dynein light chain n=1 Tax=Hydatigena taeniaeformi... [more]
A0A0R3WYJ9_HYDTA1.040e-1948.84Dynein light chain n=1 Tax=Hydatigena taeniaeformi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:85213..88908 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRM6
PFAMsDynein_light
Model size1882
Max annot lvl2759|Eukaryota
KEGG koko:K10418
KEGG Pathwayko04962,map04962
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.41e-57
EggNOG OGsKOG3430@1|root,KOG3430@2759|Eukaryota
Ec32 ortholog descriptionDynein light chain, type 1/2
Ec32 orthologEc-12_000380.1
Descriptionpositive regulation of ATP-dependent microtubule motor activity, plus-end-directed
Cds size267
COG categoryS
BRITEko00000,ko00001,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.14.1prot_P-littoralis_Contig85.14.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig85 86114..87535 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791715.362619-UTR-P-littoralis_Contig85:85212..861131680791715.362619-UTR-P-littoralis_Contig85:85212..86113Pylaiella littoralis U1_48UTRP-littoralis_Contig85 85213..86113 -
1680791715.4108782-UTR-P-littoralis_Contig85:87535..876021680791715.4108782-UTR-P-littoralis_Contig85:87535..87602Pylaiella littoralis U1_48UTRP-littoralis_Contig85 87536..87602 -
1680791715.4243693-UTR-P-littoralis_Contig85:88261..889081680791715.4243693-UTR-P-littoralis_Contig85:88261..88908Pylaiella littoralis U1_48UTRP-littoralis_Contig85 88262..88908 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791715.377547-CDS-P-littoralis_Contig85:86113..862251680791715.377547-CDS-P-littoralis_Contig85:86113..86225Pylaiella littoralis U1_48CDSP-littoralis_Contig85 86114..86225 -
1680791715.388535-CDS-P-littoralis_Contig85:86784..868881680791715.388535-CDS-P-littoralis_Contig85:86784..86888Pylaiella littoralis U1_48CDSP-littoralis_Contig85 86785..86888 -
1680791715.4007454-CDS-P-littoralis_Contig85:87484..875351680791715.4007454-CDS-P-littoralis_Contig85:87484..87535Pylaiella littoralis U1_48CDSP-littoralis_Contig85 87485..87535 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig85.14.1

>prot_P-littoralis_Contig85.14.1 ID=prot_P-littoralis_Contig85.14.1|Name=mRNA_P-littoralis_Contig85.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=89bp
MSARPVIKTSTMAPDMQEAAIQVAQDAIRDNNLEKDIANAVKAAFESLYP
SLWHCFVGRNFGCYVTHEHTKFVYLYIGQLGVCLFSTA*
back to top

mRNA from alignment at P-littoralis_Contig85:85213..88908-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig85.14.1 ID=mRNA_P-littoralis_Contig85.14.1|Name=mRNA_P-littoralis_Contig85.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3696bp|location=Sequence derived from alignment at P-littoralis_Contig85:85213..88908- (Pylaiella littoralis U1_48)
CTTGGAAATATCGCCACCAGGGGTGGTATTCTGTAGGGGGGGTGGTATCT TCTGTGGGGGTGGTATCTTGTGTGGTATACGGTAGCCAGCCGCAGACCCA TACCACCGGAAATAATAGAAAAGAGAACAGAAAAAATAAAAAATACAAAG GGAAAATAAAAGTTCTGTGACCACAAGCCGCGGTACGAAATGTTTGGGAA ACGAACATTCGGCTCCAAAATGCTGACCAGCATTTTCTGACAAGATTGCA TTTTTGCGAATTTTGCTGTCCCCATTAAATCCGGTCTTACCCGTGCAAAA AAGAGAAAAAGAGAAAAAAAGTAAAAAAGGGACTGCTGTCTCTCATCTTC TATCTCAAGAAGTGGTAAAGATGTTGTACGTGTGCGTAAGCCTGCCGACC GCTACACGTGCATCGTGTTCATGAATTTCGATCGCAGTGTGACGACAAGG CGCCAAAGGGCCCTCTCGGTGAACATTTGGAACATTTAGGTCGCAGTTTT GCATTAGAAAAAAAAAATGTGAGCGCGAGAAGGAGACAGGACAATACTGC TGTAGGTGCGTTGGGGGCTCAAAAGAGCGGGCCCTGACCCGGTCGGAGGG CAGCGCTGTGCTATCGATGCATGCCAATGAGACTGCCACTGCCACAGGTG TGATGGAAAGGGGTCATTTTTTAGAGTGCGCTCCGGACAGGTTTTTAGAA GTGTCCACGAGCGCTTTCTTTCGTGCGTTCAGCTCTTTAGGAGAGTCTAA GTTTATACGGTGATACGGTGTACTTCATTGTCCCCAAGTATCCGTGCTCT GCAGCAGTACAGCAGTAGGCAGTGAATGTGTACGTGTTCATGTTTCGCTG ATTATCGGTGTGATTTGACCTTGGATCGACGTGCAATGCACAATTAATCT CCTCACCATTGGCTGTGTGGACGATTTTCCTTGCATTCGACCTTTTCGAG CTTCAATGGCACTCTCGAACAGCGCACAGCACAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGAAACACCAAC CAAACACAGAAGGATCAGCAGCAGCAGCAGCGAAGCAACCCCTGGGCAAC CCCTGCGCCTGGGGGAGGAGGTCCCGTAATGTTTCATTCACGAACCCCCT TTAAAAAAACGTTTTGGTTTGTGTTGTCGGGTTGTTTTGTCGAAACGGTG AGCCTGGCTCAAGATCGCTGCCAAGAGATCGTCGCGGTGACCACCGAAAT TACGCCACCACCACACGTGTTATTGTGCACTTCTTCGGTGGATTCGGGCG GGACAGACGGAGTATATTGTCAGGACGAAAATCCGCCACCGACGAGAACC TGCCTTGGCTCGGTGGGGGTACTATGTCGGCCCGACCAGTTATCAAGACG AGTACAATGGCACCGGATATGCAGGTGAAGTCCACAGTACGAGTAGGTCT GCGACGCAGGGGCTGTATGGATTTAGCCGACAGTAGTTGGTATCTCAATC GCGGAGCGTTGAATACGTTCTGCAAGTCCCTGCTGTGTGTTTTACGCCCT GTTTTTACTTTTTCCGTGGTGATTTTTGCTGGGTGTGCGGTGGTTATTGT TGGGTAAATTGATATGCCTCATCCAGCACATGAAAACAGCGTTGACGTGA AAACTCCAAGCCATTCAGTACTGAAGTATACCATAAAATAGTACGAACAG CCTGGTGTGTGACGATGTAGTGTCGCCTGTCACTCTTCTTTATGAGATTT TGCCCATTTGTTTTCTCCAGCTTGTCGTTCTTGTGGGCACGAATGTATGC GAGTGTGTGAAAGGGCGTGTGTATTCGCGTTTGTCCGTCTTCGTCAACAC CGCCCAGCCCACGCTGGCCTGTGCGTGTGCCTGGTGTGCGCGTGTGTGTT GTGGTCCCATTTACTCCGGATGCCAGTCCGCACCAATTTTGAGTACCTCG GACAAATGGAAGACTGAGTTCACCGTCCCCGAACACCGTCATCTTTAATT AATTGGGTTCAATCAAGCAGGAGGCTGCGATCCAGGTAGCGCAGGACGCC ATTCGCGACAACAATCTGGAGAAAGATATTGCAAACGCGGTGAAAGCCGC CTTTGAAAGTCTCTATCCATCCCTGTAAGTCGACACGCATGCTGAGTCTA TTAAGTTTTCATCGATATCCTGTTAAAGCAAGAAATCCAGAGTGTGTTGC ACTACACGGCCGGGCGCCAACCGCGGCATCAGCACCGTCTGCCCGAAATA CGAGCGTTGGTAAGTAAGTGACCAGATTGTATATCATCAAAAGTCAAAAT ACTGGGTGCTGACTACTACTACCTTAGTATTGCTATCCACGATTACTCCT GTATGAATCACCGCAATATCATATAATCAAACGACAACAACATTATTGTA GGTCGTCATGGCGGATAACCAGGCATGAGCTAAACTCGCCGAATCGAGCC CCGATGCAGCAATACAATGGACTGCGCGGAAGAGTTGTAATTTCAGGCCG CTTGGTCTGCAAATCCTGCACAAAAACAGTCGTTCTTGTAAGCATTCACT TCGAAGCAGGAAATACGAGTAGGACATTTTGAACATCAATGTTGCCTGAA AACTTTGTTGAGGTAGGCCTTCCCTTTCGACTTATCAATCACGTTTGCTT TTGACGTTTCATCCCGCAACCACACCAATATAGATGGCACTGCTTCGTCG GCAGAAATTTCGGGTGTTACGTTACGCACGAACACACAAAATTCGTCTAC TTGTACATCGGACAACTGGGGGTATGCCTATTTTCCACGGCATGACGAAA ACAGCAGCTATTCGGGGAAAAGGGATGAAGAGCTCAAAGCGGCAGGGAGC GAGAAAAGGCGAAAGAGAGAGCATGTAGTTGGAGGCAAGTTCTGAAAGTC CTGCTTGAAGTTCAAAGATCGTGGTCTAGTGGACGAAGGAGAACATCAGC CGTCGAGAACAGTCCCACAACGTTACGGCAGGCGTGTTTGATGAAGGTTC TTCGCTGGACTACGCAACATGGAACATGGAAGTGTTCCCGACATTCCTTC CTGTAGTGACAGAAAGGTGATGCACGATTGGTTTTGCGCCAGTACGAGTG AACTTCGGGACGTTCGGCGAGAAGGATTCAGACGTGGTCGTGATTATGGC ATTAAGTGCTGTCAACTCAGCCATCGTGCTGTTCGTTGCGAACATTACCG TAGTTGCGACAGTCGTAGTGCACGAGTGCCACAGAGATGAGCTGGCGCAG TTGTCCAACCGGCAGTTAACGTCCGCCCGGAACTCCCGTCTCGACTCCAA AATTGAAAACTTGTGAGTGTATTGTTGCGAGGTGCATATTGACCCACAGC CAAGAGTCTTGTCACTTGTCCACGATGTTCTGCGTTCCTAAGGCTCGGTT ATTTTCGGGACATTTATCGATCAACAGTTACACCGCTTGAACTTTGACGT TCCGCCATTACTCGGCATTGGAATCAAAATGCCCTGGCTTTTTTTCTGGC TGATACTTGCTCCGTTCCGTGCACACTGTCGTGTCAGAGCTGGTCGTACC GAGCCTCCATAGCGTGAAGCAACACCGCGGTTGAAATTTCACGGTATGTT TTGTCAGTAGATGGCTCTAGGCAAGTGTCTCGTCCACGGACAATATCAAT CTCGGGATAATATCTCGTTCTTGCGCGAATGTTTACGCTCGGTGCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig85:85213..88908-

>mRNA_P-littoralis_Contig85.14.1 ID=mRNA_P-littoralis_Contig85.14.1|Name=mRNA_P-littoralis_Contig85.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=267bp|location=Sequence derived from alignment at P-littoralis_Contig85:85213..88908- (Pylaiella littoralis U1_48)
ATGTCGGCCCGACCAGTTATCAAGACGAGTACAATGGCACCGGATATGCA
GGAGGCTGCGATCCAGGTAGCGCAGGACGCCATTCGCGACAACAATCTGG
AGAAAGATATTGCAAACGCGGTGAAAGCCGCCTTTGAAAGTCTCTATCCA
TCCCTATGGCACTGCTTCGTCGGCAGAAATTTCGGGTGTTACGTTACGCA
CGAACACACAAAATTCGTCTACTTGTACATCGGACAACTGGGGGTATGCC
TATTTTCCACGGCATGA
back to top