prot_P-littoralis_Contig85.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig85.1.1
Unique Nameprot_P-littoralis_Contig85.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length370
Homology
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: A0A6H5JIA4_9PHAE (PHD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA4_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 1.280e-140
Identity = 216/288 (75.00%), Postives = 240/288 (83.33%), Query Frame = 0
Query:    1 QEFVAICAHLPAELKDDLSRVAALSEETHRLTAELSRDQAEILERAKAKYRKMARPEQLKNLIDEDALQRAHEKRRKVDHGVTEKVSITKKMYGALDACIKSIDDEIDKLEKDVKESYGVIPDIPSLAPEVSAENKKNAAAAALAAD--GGLTAGPQTRAGLAAYPGVAAAASGXXXXXXXXLGAVAGGVARGNELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGCAADAREKERREQLVKKAVSANTTPVKLSAAVKLPEN 286
            QEF+AICAHLP ELKDDL +VA LSEETHRLTAELSRDQAEILERAKAKYR+M RPEQLKNLIDEDALQ++ +KRRKVD  V+EKVSITK+MYGALD CIK+IDDEIDKLEKDVKESYG +PDIPSLAPE+ AE+KK A          GGL AGPQTRAG+AAYP  A A           L   AGG  R N+L+S+NEPVYCVCRQ+GWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQK++ FWLCPGC+ DAR KE+REQL ++A SANTTPVK +AAVKLPEN
Sbjct:   39 QEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSRQKRRKVDESVSEKVSITKRMYGALDTCIKNIDDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGL-AGPQTRAGVAAYPAAALAGG----VGAGALXXXAGGAVRSNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSANTTPVKPAAAVKLPEN 321          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: D7FVE0_ECTSI (PHD finger protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE0_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 1.010e-137
Identity = 220/288 (76.39%), Postives = 243/288 (84.38%), Query Frame = 0
Query:    1 QEFVAICAHLPAELKDDLSRVAALSEETHRLTAELSRDQAEILERAKAKYRKMARPEQLKNLIDEDALQRAHEKRRKVDHGVTEKVSITKKMYGALDACIKSIDDEIDKLEKDVKESYGVIPDIPSLAPEVSAENKKNAAAAALAAD--GGLTAGPQTRAGLAAYPGVAAAASGXXXXXXXXLGAVAGGVARGNELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGCAADAREKERREQLVKKAVSANTTPVKLSAAVKLPEN 286
            QEF+AICAHLP ELKDDL +VA LSEETHRLTAELSRDQAEILERAKAKYR+M RPEQLKNLIDEDALQ++ EKRRKVD  V+EKVSITK+MYGALD CIK+IDDEIDKLEKDVKESYG +PDIPSLAPE+ AE+KK A          GGL AGPQTRAG+AAYP  AA A G   XXXXX         RGN+L+S+NEPVYCVCRQ+GWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQK++ FWLCPGC+ DAR KE+REQL ++A S NTTPVK +AAVKLPEN
Sbjct:   30 QEFLAICAHLPTELKDDLKKVATLSEETHRLTAELSRDQAEILERAKAKYRQMTRPEQLKNLIDEDALQKSREKRRKVDESVSEKVSITKRMYGALDTCIKNIDDEIDKLEKDVKESYGAMPDIPSLAPEMFAEHKKTAXXXXXXXXXXGGL-AGPQTRAGVAAYP-AAALAGGVGAXXXXXXXXX---XVRGNDLLSTNEPVYCVCRQVGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKEIGFWLCPGCSVDARAKEKREQLERRATSTNTTPVKPAAAVKLPEN 312          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: J3LST5_ORYBR (PHD finger protein ING n=6 Tax=Oryzinae TaxID=1648021 RepID=J3LST5_ORYBR)

HSP 1 Score: 88.6 bits (218), Expect = 1.480e-16
Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 0
Query:   83 TEKVSITKKMYGALDACIKSIDDEIDKLEKDVKESYGVIPDIPSLAPEVSA---ENKKNAAAAALAADGGLTAGPQTRAGLAAYPGVAAAASGXXXXXXXXLGAVAGGVARGNELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC 250
            TEKV + ++ Y  +++ IK +D+++ +  +D+K+   + PD PS+ P +SA   ++K+    +   A          R     +  +    S         +          ++ +  NEP YC+C Q+ +GDMI CDNE+CE GEWFHY CVGL   + +    W CP C
Sbjct:   91 TEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKQEGKIPPDEPSILPPISAFSRDDKRRPGFSTPQATKKFREREWDRERSMDFDLMPPPGSNKKTSTPMDV----------DQTIDPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 250          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: A0A0A9NUC7_ARUDO (PHD-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9NUC7_ARUDO)

HSP 1 Score: 82.4 bits (202), Expect = 4.610e-16
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0
Query:  195 VSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC 250
            +  NEP YC+C Q+ +GDMI CDNE+CE GEWFHY CVGL   + +    W CP C
Sbjct:   25 IDPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 79          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: A0A448X7Q8_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A448X7Q8_9PLAT)

HSP 1 Score: 81.3 bits (199), Expect = 1.250e-15
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  195 VSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGCAADAR 255
            V  NEP YCVC+Q+ +G+M+ CDN DC H EWFH+ CVGL +  + Q   W CP C AD +
Sbjct:   23 VDPNEPTYCVCKQVSYGEMVACDNPDC-HVEWFHFGCVGLTVKPKGQ---WFCPQCIADGK 79          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: K4AE43_SETIT (PHD finger protein ING n=8 Tax=Poaceae TaxID=4479 RepID=K4AE43_SETIT)

HSP 1 Score: 85.5 bits (210), Expect = 1.830e-15
Identity = 49/168 (29.17%), Postives = 78/168 (46.43%), Query Frame = 0
Query:   83 TEKVSITKKMYGALDACIKSIDDEIDKLEKDVKESYGVIPDIPSLAPEVSAENKKNAAAAALAADGGLTAGPQTRAGLAAYPGVAAAASGXXXXXXXXLGAVAGGVARGNELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC 250
            TEKV + ++ Y  +++ IK +D+++ +  +D+K    + PD P + P +   ++        +        PQ                             AG     ++++  NEP YC+C Q+ +GDMI CDNE+CE GEWFHY CVGL   + +    W CP C
Sbjct:   89 TEKVLLARQAYDLIESHIKRLDEDLGQFAEDLKHEGKIPPDEPPVLPPIPVVSRDEKRRLGFST-------PQASKKFREREWDRERGMDFDLMPPPGSSKKAGTPMDVDQMIDPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYTCVGL-TPETRFKGKWFCPTC 248          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: A0A199VF25_ANACO (PHD finger protein ING n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A199VF25_ANACO)

HSP 1 Score: 85.5 bits (210), Expect = 1.890e-15
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 0
Query:   83 TEKVSITKKMYGALDACIKSIDDEIDKLEKDVKESYGVIPDIPSLAPE---VSAENKKNAAAAALAADGGLTAGPQTRAGLAAYPGVAAAASGXXXXXXXXLGAVAGGVARGNELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC 250
            TEKV + ++ Y  +++ IK +D+++ +  +D+K+   + PD P++ P    V+ + K+          G +T  PQ++       GV                         ++ +  NEP YC+C Q+ +GDMI CDNE+CE GEWFHY CVGL   + +    W CP C
Sbjct:   91 TEKVLLAQQAYNLIESHIKRLDEDLAQFAEDLKQEGKIPPDEPAILPPLPVVTRDEKRKG--------GYIT--PQSKRLKEREWGVERGMDLDLMPPPGSNKKSTPASVDVDQSIDPNEPTYCICHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 250          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: A0A1E3PG82_9ASCO (Chromatin modification-related protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PG82_9ASCO)

HSP 1 Score: 85.1 bits (209), Expect = 3.050e-15
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:  192 NELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGCAADAREKERREQLVKK 266
            + L+   + +YC CRQ+ +GDMIGCDNE+C++ EWFHY CVGL+   Q     W CP C    +EKE +++  KK
Sbjct:  194 SSLMGDEDEIYCFCRQVSFGDMIGCDNENCKY-EWFHYGCVGLKEPPQG---IWYCPACTKTTKEKETKKERKKK 264          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: I1GNB5_BRADI (PHD finger protein ING n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GNB5_BRADI)

HSP 1 Score: 84.7 bits (208), Expect = 3.480e-15
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  192 NELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC 250
            ++++  NEP YCVC Q+ +GDMI CDNE+CE GEWFHY CVGL   + +    W CP C
Sbjct:  192 DQMIDPNEPTYCVCHQVSYGDMIACDNENCEGGEWFHYSCVGL-TPETRFKGKWFCPTC 249          
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Match: UPI001FB1588C (PHD finger protein ING2 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB1588C)

HSP 1 Score: 84.7 bits (208), Expect = 3.790e-15
Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = 0
Query:   83 TEKVSITKKMYGALDACIKSIDDEIDKLEKDVKESYGVIPDIPSLAPEVSA--ENKKNAAAAALAADGGLTAGPQTRAGLAAYPGVAAAASGXXXXXXXXLGAVAGGVARG-------NELVSSNEPVYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC 250
            TEKV + ++ Y  +D+ +K +D++++   +D+K+   +  D P+  P V     N+K  A         +   PQ++     Y                 L    GG+ +        ++ +  NEP YC+C Q+ +GDMI CDNE C+ GEWFHY CVGL   + +    W CP C
Sbjct:   91 TEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPSDEPATLPPVPLVPRNEKRKA---------IYTAPQSQTRRVEYR-----ERDWDRDRDFELMPPPGGLKKDFSVPVEIDQPIDPNEPTYCICHQVSYGDMIACDNESCQGGEWFHYSCVGL-TPETRFRGKWYCPTC 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA4_9PHAE1.280e-14075.00PHD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVE0_ECTSI1.010e-13776.39PHD finger protein-related n=1 Tax=Ectocarpus sili... [more]
J3LST5_ORYBR1.480e-1630.41PHD finger protein ING n=6 Tax=Oryzinae TaxID=1648... [more]
A0A0A9NUC7_ARUDO4.610e-1655.36PHD-type domain-containing protein n=1 Tax=Arundo ... [more]
A0A448X7Q8_9PLAT1.250e-1552.46Hypothetical protein n=1 Tax=Protopolystoma xenopo... [more]
K4AE43_SETIT1.830e-1529.17PHD finger protein ING n=8 Tax=Poaceae TaxID=4479 ... [more]
A0A199VF25_ANACO1.890e-1530.99PHD finger protein ING n=3 Tax=Ananas comosus TaxI... [more]
A0A1E3PG82_9ASCO3.050e-1546.67Chromatin modification-related protein n=1 Tax=Nad... [more]
I1GNB5_BRADI3.480e-1554.24PHD finger protein ING n=4 Tax=Brachypodium distac... [more]
UPI001FB1588C3.790e-1529.94PHD finger protein ING2 n=1 Tax=Impatiens glanduli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 202..251
e-value: 4.0E-6
score: 36.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 198..267
e-value: 2.2E-19
score: 71.1
NoneNo IPR availableGENE3D6.10.140.1740coord: 1..107
e-value: 8.4E-8
score: 34.6
NoneNo IPR availablePIRSRPIRSR628651-50PIRSR628651-50coord: 196..262
e-value: 2.8E-23
score: 80.8
NoneNo IPR availablePIRSRPIRSR628651-51PIRSR628651-51coord: 196..262
e-value: 2.8E-23
score: 80.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..370
NoneNo IPR availablePANTHERPTHR10333:SF101PHD FINGER PROTEIN ING2coord: 194..251
NoneNo IPR availablePANTHERPTHR10333:SF101PHD FINGER PROTEIN ING2coord: 3..139
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 194..251
IPR028651ING familyPANTHERPTHR10333INHIBITOR OF GROWTH PROTEINcoord: 3..139
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 192..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:7428..9930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.1.1mRNA_P-littoralis_Contig85.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig85 7428..9930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig85.1.1 ID=prot_P-littoralis_Contig85.1.1|Name=mRNA_P-littoralis_Contig85.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=370bp
QEFVAICAHLPAELKDDLSRVAALSEETHRLTAELSRDQAEILERAKAKY
RKMARPEQLKNLIDEDALQRAHEKRRKVDHGVTEKVSITKKMYGALDACI
KSIDDEIDKLEKDVKESYGVIPDIPSLAPEVSAENKKNAAAAALAADGGL
TAGPQTRAGLAAYPGVAAAASGGAAAGVGALGAVAGGVARGNELVSSNEP
VYCVCRQIGWGDMIGCDNEDCEHGEWFHYHCVGLEMVDQKQLIFWLCPGC
AADAREKERREQLVKKAVSANTTPVKLSAAVKLPENGEQEEEDEDNDNDI
GNGNDNDTEEGGAKVEDLGNQDKEDKPRDGRGSGSSAPGGKSETSMATGS
ERGGEPLRATGGSGGGGAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR028651ING_fam
IPR011011Znf_FYVE_PHD