mRNA_P-littoralis_Contig837.19.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI) HSP 1 Score: 461 bits (1186), Expect = 1.270e-158 Identity = 238/248 (95.97%), Postives = 240/248 (96.77%), Query Frame = 1
Query: 1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAGDVQMT 744
RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDG PQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNW NDMDE AKKLCMKALLEVVDSGAKNMEIAIVR G+ANEMMTEE MQAVAAELEAEAE AK A+AGDVQMT
Sbjct: 4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK) HSP 1 Score: 390 bits (1002), Expect = 8.870e-131 Identity = 196/248 (79.03%), Postives = 220/248 (88.71%), Query Frame = 1
Query: 4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAAT-AGDVQMT 744
YDRAITVFSPDGHLFQVEYA+EAVKRGSSVV ++GKDCV+LGVER++TAKLQD RT+RKI K+D+H+TLAFAGLTADARVLV+KARLECQSYRLTCEDAPS+EYVARF+ARTQQ+YTQRGGMRPFGVS +LAG DGAPQ+YQTDPAGTYSAWK N IGG NS +M+EFLEKNW DMD AKKL +K LLEVVDSGAKNME+ +VR GQ NEMMTEE M AVAAE+EAEAE AKA T AG+ + T
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVKRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSVEYVARFVARTQQKYTQRGGMRPFGVSVMLAGHGVDGAPQLYQTDPAGTYSAWKGNCIGGKNSKSMQEFLEKNWEEDMDAPAAKKLAIKCLLEVVDSGAKNMEVCVVRRGQPNEMMTEEAMSAVAAEIEAEAEEAKAGTGAGEEKST 250
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA) HSP 1 Score: 365 bits (938), Expect = 4.740e-121 Identity = 189/249 (75.90%), Postives = 214/249 (85.94%), Query Frame = 1
Query: 4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVND--MDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAGDVQMT 744
YDRAITVFSPDGHLFQVEYAIEAVKRGSSVV V+ D +V+GVERRATAKLQDPRTIRKIVK+D+H+TLAFAGLTADARVL+DKARLE QSYRLTCEDAPS+EY+ARFIARTQQ+YTQRGGMRPFGVS +LAGF DG PQ+YQTDPAGT+SAWKANAIGG +S NMREFLEKN+ + +DEA A KLC+K LLEVVDSGAKNMEI ++R E M++ M AV A++EAEAE AK A+AG T
Sbjct: 5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSLEYMARFIARTQQKYTQRGGMRPFGVSCMLAGFGTDGQPQLYQTDPAGTHSAWKANAIGGKSSKNMREFLEKNYPTEGGLDEAAAVKLCIKTLLEVVDSGAKNMEICLIRRDTPVETMSDTDMAAVVAQIEAEAEEAKKASAGSSMET 253
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA) HSP 1 Score: 350 bits (897), Expect = 7.260e-115 Identity = 173/238 (72.69%), Postives = 206/238 (86.55%), Query Frame = 1
Query: 1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK 714
RYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK V+LGVERRATAKLQDPRTI+KI KID H+TLAFAGLTADARVLV+KARLECQSYRLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG + DG+ +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK W +D++E A +L +K LLEVVDSGAKNME+A++ G+ M+ E T+ A++A +EAE E AK
Sbjct: 4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAK 241
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S2F6I3_9STRA (Proteasome subunit alpha type n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6I3_9STRA) HSP 1 Score: 345 bits (886), Expect = 4.840e-113 Identity = 176/247 (71.26%), Postives = 206/247 (83.40%), Query Frame = 1
Query: 4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK-AATAGDVQM 741
YDRAITVFSPDG LFQ++YA EAVK+ S+VV V G++ VV+GVER+A AKLQ+ RTIRKIVK+DSH TLAFAGLTADARVL++KAR ECQSYRLTCEDAPS+EY+ARFIA+TQQRYTQRGG+RPFGVSSILAGF DG+P IYQ DP+GTY AWKANAIGG N MREFLEK WV D++EA A KL +KALLEVVDSG+KNME+ +VR G E + +E + A+ E+EAE E AK AAT D +M
Sbjct: 17 YDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVTGENVVVIGVERKAIAKLQESRTIRKIVKLDSHATLAFAGLTADARVLIEKARTECQSYRLTCEDAPSLEYIARFIAKTQQRYTQRGGVRPFGVSSILAGFHTDGSPSIYQIDPSGTYFAWKANAIGGRNFKPMREFLEKEWVPDLEEAQALKLTVKALLEVVDSGSKNMEVVVVRRGAGPETLDDEALTAIVTEVEAEQEEAKVAATTEDAEM 263
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S2RQS1_9STRA (Proteasome subunit alpha type n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQS1_9STRA) HSP 1 Score: 343 bits (879), Expect = 4.300e-112 Identity = 169/238 (71.01%), Postives = 200/238 (84.03%), Query Frame = 1
Query: 1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK 714
RYDRAITVFSPDG LFQ++YA EAVK+ S+VV V+ D V+LGVER+ AKLQDPRTIRKIVK+D+H TLAFAGL ADARVL++K R+ECQSYRLTCEDAPS+EY+ARFIARTQQRYTQRGG+RPFGVSSILAGF+ DGAPQIYQ DP+GTY WKANAIGG N MREFLEK W + +A A KL +KALLEVVDSG+KNME+ ++R G+ M++E++QAV ++EAE E AK
Sbjct: 3 RYDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVRAADTVILGVERKTIAKLQDPRTIRKIVKLDTHATLAFAGLNADARVLIEKTRIECQSYRLTCEDAPSLEYIARFIARTQQRYTQRGGVRPFGVSSILAGFNTDGAPQIYQIDPSGTYFGWKANAIGGRNFKGMREFLEKEWQEGLSQAEATKLTVKALLEVVDSGSKNMELVVIRRGEPAATMSDESVQAVVDQVEAEMEEAK 240
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S1FT14_9STRA (Proteasome subunit alpha type n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT14_9STRA) HSP 1 Score: 335 bits (858), Expect = 4.130e-109 Identity = 166/237 (70.04%), Postives = 202/237 (85.23%), Query Frame = 1
Query: 4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK 714
YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V ++ D V+L VERRATA+LQD RTIRKIV +D H+ LAFAGLTADARVLV+KAR+ECQSYRLTCEDAPSIEY+AR+IARTQQ+YTQRGG+RPFG++++LAGFSQ G+P +YQTDPAGTYS+WKANA+GG N+ +MREFLEKN + M E A KL +KALLEVVDSGAKNMEI++ R + ++ EE + + E+EAEAE +K
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSATVGIRASDAVILAVERRATARLQDSRTIRKIVSVDDHVRLAFAGLTADARVLVNKARVECQSYRLTCEDAPSIEYIARYIARTQQKYTQRGGVRPFGITTLLAGFSQSGSPCLYQTDPAGTYSSWKANAVGGRNAKSMREFLEKNCDDSMSETDAVKLAVKALLEVVDSGAKNMEISVSRKNS-SVILEEEVVDKIVKEIEAEAEESK 238
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV) HSP 1 Score: 333 bits (854), Expect = 2.590e-108 Identity = 172/253 (67.98%), Postives = 203/253 (80.24%), Query Frame = 1
Query: 4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFS---------QDGA--PQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAG 729
YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D TLAFAGLTADARVLV+KAR+ECQSYRLTCEDAPS+EYVAR++ARTQQ+YTQRGG+RPFG++++LAGFS +DG P +YQTDPAGT+S+WKA IGG N+ ++REFLEKN+ + MDE KL ++ALLEVVDSGAKNMEI +VR G E M E + AV E+EAE E K + G
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSVEYVARYLARTQQKYTQRGGVRPFGIATLLAGFSDPVQGKEDEEDGGSGPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDGMDEGGCVKLSVRALLEVVDSGAKNMEICVVRRGGVRETMEESAVDAVVKEIEAEQEEGKRGSTG 255
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7R9UBV5_9STRA (Proteasome subunit alpha type n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBV5_9STRA) HSP 1 Score: 330 bits (847), Expect = 6.040e-107 Identity = 165/232 (71.12%), Postives = 197/232 (84.91%), Query Frame = 1
Query: 1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEA 696
RYDRAITVFSPDGHLFQVEYAI AVK GS+VV V+G D VVLGVERRATAKL++ RTIRK+V++D HIT AFAGLTADARVL KAR+ECQSYRLTC+DAPS+EYV+RF+A+TQQRYTQRGG+RPFGVS++LAGFS DG+PQ++QTDPAGTYS WKANAIGG NS NMRE LE NW + E A KL ++ LLEVVDSG+ NM + IVRS A E+ +E+ + ++AE++A
Sbjct: 21 RYDRAITVFSPDGHLFQVEYAINAVKAGSAVVGVRGTDVVVLGVERRATAKLRETRTIRKVVQLDDHITAAFAGLTADARVLTTKARIECQSYRLTCDDAPSVEYVSRFLAKTQQRYTQRGGVRPFGVSALLAGFSPDGSPQLFQTDPAGTYSEWKANAIGGKNSKNMRELLENNWTAGLSEEEAVKLTVRTLLEVVDSGSSNMGLVIVRSDGATEV-SEDEVNTLSAEIKA 251
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S3M1D5_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1D5_9STRA) HSP 1 Score: 329 bits (844), Expect = 7.230e-107 Identity = 165/242 (68.18%), Postives = 202/242 (83.47%), Query Frame = 1
Query: 4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAG 729
YDRAITVFSPDGHLFQVEYA+EAVKRGS+VV V+G D VVLGVER+A A+LQD RTIRKI K+D ++T+AFAG TADARVL++KAR+E QSYRLTCEDAPSI+Y+AR IA+TQQ YTQRGG+RPFGVSS+++GF+ D +PQ+Y TDPAGTYSAWKANAIGG N ++EFLEKNW + EA A +L +KALLEVVDSG+KNME+A+ R GQ ++ EE ++ + A++E E E AK AG
Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVKRGSAVVGVRGADSVVLGVERKAVAQLQDARTIRKIAKLDENLTIAFAGFTADARVLIEKARIEAQSYRLTCEDAPSIDYMARHIAKTQQSYTQRGGVRPFGVSSMISGFNADKSPQLYLTDPAGTYSAWKANAIGGRNEKAVQEFLEKNWTASLAEADAIRLTVKALLEVVDSGSKNMELAVSRYGQPVRILKEEELEVIIADIEREIEEAKKEAAG 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig837.19.2 >prot_P-littoralis_Contig837.19.2 ID=prot_P-littoralis_Contig837.19.2|Name=mRNA_P-littoralis_Contig837.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp MRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLback to top mRNA from alignment at P-littoralis_Contig837:75610..80001- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig837.19.2 ID=mRNA_P-littoralis_Contig837.19.2|Name=mRNA_P-littoralis_Contig837.19.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4392bp|location=Sequence derived from alignment at P-littoralis_Contig837:75610..80001- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig837:75610..80001- >mRNA_P-littoralis_Contig837.19.2 ID=mRNA_P-littoralis_Contig837.19.2|Name=mRNA_P-littoralis_Contig837.19.2|organism=Pylaiella littoralis U1_48|type=CDS|length=381bp|location=Sequence derived from alignment at P-littoralis_Contig837:75610..80001- (Pylaiella littoralis U1_48)back to top |