mRNA_P-littoralis_Contig837.19.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig837.19.2
Unique NamemRNA_P-littoralis_Contig837.19.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 1.270e-158
Identity = 238/248 (95.97%), Postives = 240/248 (96.77%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAGDVQMT 744
            RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDG PQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNW NDMDE  AKKLCMKALLEVVDSGAKNMEIAIVR G+ANEMMTEE MQAVAAELEAEAE AK A+AGDVQMT
Sbjct:    4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK)

HSP 1 Score: 390 bits (1002), Expect = 8.870e-131
Identity = 196/248 (79.03%), Postives = 220/248 (88.71%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAAT-AGDVQMT 744
            YDRAITVFSPDGHLFQVEYA+EAVKRGSSVV ++GKDCV+LGVER++TAKLQD RT+RKI K+D+H+TLAFAGLTADARVLV+KARLECQSYRLTCEDAPS+EYVARF+ARTQQ+YTQRGGMRPFGVS +LAG   DGAPQ+YQTDPAGTYSAWK N IGG NS +M+EFLEKNW  DMD   AKKL +K LLEVVDSGAKNME+ +VR GQ NEMMTEE M AVAAE+EAEAE AKA T AG+ + T
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVKRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSVEYVARFVARTQQKYTQRGGMRPFGVSVMLAGHGVDGAPQLYQTDPAGTYSAWKGNCIGGKNSKSMQEFLEKNWEEDMDAPAAKKLAIKCLLEVVDSGAKNMEVCVVRRGQPNEMMTEEAMSAVAAEIEAEAEEAKAGTGAGEEKST 250          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA)

HSP 1 Score: 365 bits (938), Expect = 4.740e-121
Identity = 189/249 (75.90%), Postives = 214/249 (85.94%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVND--MDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAGDVQMT 744
            YDRAITVFSPDGHLFQVEYAIEAVKRGSSVV V+  D +V+GVERRATAKLQDPRTIRKIVK+D+H+TLAFAGLTADARVL+DKARLE QSYRLTCEDAPS+EY+ARFIARTQQ+YTQRGGMRPFGVS +LAGF  DG PQ+YQTDPAGT+SAWKANAIGG +S NMREFLEKN+  +  +DEA A KLC+K LLEVVDSGAKNMEI ++R     E M++  M AV A++EAEAE AK A+AG    T
Sbjct:    5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSLEYMARFIARTQQKYTQRGGMRPFGVSCMLAGFGTDGQPQLYQTDPAGTHSAWKANAIGGKSSKNMREFLEKNYPTEGGLDEAAAVKLCIKTLLEVVDSGAKNMEICLIRRDTPVETMSDTDMAAVVAQIEAEAEEAKKASAGSSMET 253          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA)

HSP 1 Score: 350 bits (897), Expect = 7.260e-115
Identity = 173/238 (72.69%), Postives = 206/238 (86.55%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK 714
            RYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK  V+LGVERRATAKLQDPRTI+KI KID H+TLAFAGLTADARVLV+KARLECQSYRLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG + DG+  +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK W +D++E  A +L +K LLEVVDSGAKNME+A++  G+   M+ E T+ A++A +EAE E AK
Sbjct:    4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAK 241          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S2F6I3_9STRA (Proteasome subunit alpha type n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6I3_9STRA)

HSP 1 Score: 345 bits (886), Expect = 4.840e-113
Identity = 176/247 (71.26%), Postives = 206/247 (83.40%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK-AATAGDVQM 741
            YDRAITVFSPDG LFQ++YA EAVK+ S+VV V G++ VV+GVER+A AKLQ+ RTIRKIVK+DSH TLAFAGLTADARVL++KAR ECQSYRLTCEDAPS+EY+ARFIA+TQQRYTQRGG+RPFGVSSILAGF  DG+P IYQ DP+GTY AWKANAIGG N   MREFLEK WV D++EA A KL +KALLEVVDSG+KNME+ +VR G   E + +E + A+  E+EAE E AK AAT  D +M
Sbjct:   17 YDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVTGENVVVIGVERKAIAKLQESRTIRKIVKLDSHATLAFAGLTADARVLIEKARTECQSYRLTCEDAPSLEYIARFIAKTQQRYTQRGGVRPFGVSSILAGFHTDGSPSIYQIDPSGTYFAWKANAIGGRNFKPMREFLEKEWVPDLEEAQALKLTVKALLEVVDSGSKNMEVVVVRRGAGPETLDDEALTAIVTEVEAEQEEAKVAATTEDAEM 263          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S2RQS1_9STRA (Proteasome subunit alpha type n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQS1_9STRA)

HSP 1 Score: 343 bits (879), Expect = 4.300e-112
Identity = 169/238 (71.01%), Postives = 200/238 (84.03%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK 714
            RYDRAITVFSPDG LFQ++YA EAVK+ S+VV V+  D V+LGVER+  AKLQDPRTIRKIVK+D+H TLAFAGL ADARVL++K R+ECQSYRLTCEDAPS+EY+ARFIARTQQRYTQRGG+RPFGVSSILAGF+ DGAPQIYQ DP+GTY  WKANAIGG N   MREFLEK W   + +A A KL +KALLEVVDSG+KNME+ ++R G+    M++E++QAV  ++EAE E AK
Sbjct:    3 RYDRAITVFSPDGKLFQIDYAFEAVKKASAVVAVRAADTVILGVERKTIAKLQDPRTIRKIVKLDTHATLAFAGLNADARVLIEKTRIECQSYRLTCEDAPSLEYIARFIARTQQRYTQRGGVRPFGVSSILAGFNTDGAPQIYQIDPSGTYFGWKANAIGGRNFKGMREFLEKEWQEGLSQAEATKLTVKALLEVVDSGSKNMELVVIRRGEPAATMSDESVQAVVDQVEAEMEEAK 240          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S1FT14_9STRA (Proteasome subunit alpha type n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT14_9STRA)

HSP 1 Score: 335 bits (858), Expect = 4.130e-109
Identity = 166/237 (70.04%), Postives = 202/237 (85.23%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAK 714
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V ++  D V+L VERRATA+LQD RTIRKIV +D H+ LAFAGLTADARVLV+KAR+ECQSYRLTCEDAPSIEY+AR+IARTQQ+YTQRGG+RPFG++++LAGFSQ G+P +YQTDPAGTYS+WKANA+GG N+ +MREFLEKN  + M E  A KL +KALLEVVDSGAKNMEI++ R    + ++ EE +  +  E+EAEAE +K
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSATVGIRASDAVILAVERRATARLQDSRTIRKIVSVDDHVRLAFAGLTADARVLVNKARVECQSYRLTCEDAPSIEYIARYIARTQQKYTQRGGVRPFGITTLLAGFSQSGSPCLYQTDPAGTYSSWKANAVGGRNAKSMREFLEKNCDDSMSETDAVKLAVKALLEVVDSGAKNMEISVSRKNS-SVILEEEVVDKIVKEIEAEAEESK 238          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV)

HSP 1 Score: 333 bits (854), Expect = 2.590e-108
Identity = 172/253 (67.98%), Postives = 203/253 (80.24%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFS---------QDGA--PQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAG 729
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D   TLAFAGLTADARVLV+KAR+ECQSYRLTCEDAPS+EYVAR++ARTQQ+YTQRGG+RPFG++++LAGFS         +DG   P +YQTDPAGT+S+WKA  IGG N+ ++REFLEKN+ + MDE    KL ++ALLEVVDSGAKNMEI +VR G   E M E  + AV  E+EAE E  K  + G
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSVEYVARYLARTQQKYTQRGGVRPFGIATLLAGFSDPVQGKEDEEDGGSGPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDGMDEGGCVKLSVRALLEVVDSGAKNMEICVVRRGGVRETMEESAVDAVVKEIEAEQEEGKRGSTG 255          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7R9UBV5_9STRA (Proteasome subunit alpha type n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBV5_9STRA)

HSP 1 Score: 330 bits (847), Expect = 6.040e-107
Identity = 165/232 (71.12%), Postives = 197/232 (84.91%), Query Frame = 1
Query:    1 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEA 696
            RYDRAITVFSPDGHLFQVEYAI AVK GS+VV V+G D VVLGVERRATAKL++ RTIRK+V++D HIT AFAGLTADARVL  KAR+ECQSYRLTC+DAPS+EYV+RF+A+TQQRYTQRGG+RPFGVS++LAGFS DG+PQ++QTDPAGTYS WKANAIGG NS NMRE LE NW   + E  A KL ++ LLEVVDSG+ NM + IVRS  A E+ +E+ +  ++AE++A
Sbjct:   21 RYDRAITVFSPDGHLFQVEYAINAVKAGSAVVGVRGTDVVVLGVERRATAKLRETRTIRKVVQLDDHITAAFAGLTADARVLTTKARIECQSYRLTCDDAPSVEYVSRFLAKTQQRYTQRGGVRPFGVSALLAGFSPDGSPQLFQTDPAGTYSEWKANAIGGKNSKNMRELLENNWTAGLSEEEAVKLTVRTLLEVVDSGSSNMGLVIVRSDGATEV-SEDEVNTLSAEIKA 251          
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Match: A0A7S3M1D5_9STRA (Proteasome subunit alpha type n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1D5_9STRA)

HSP 1 Score: 329 bits (844), Expect = 7.230e-107
Identity = 165/242 (68.18%), Postives = 202/242 (83.47%), Query Frame = 1
Query:    4 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEETMQAVAAELEAEAEAAKAATAG 729
            YDRAITVFSPDGHLFQVEYA+EAVKRGS+VV V+G D VVLGVER+A A+LQD RTIRKI K+D ++T+AFAG TADARVL++KAR+E QSYRLTCEDAPSI+Y+AR IA+TQQ YTQRGG+RPFGVSS+++GF+ D +PQ+Y TDPAGTYSAWKANAIGG N   ++EFLEKNW   + EA A +L +KALLEVVDSG+KNME+A+ R GQ   ++ EE ++ + A++E E E AK   AG
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVKRGSAVVGVRGADSVVLGVERKAVAQLQDARTIRKIAKLDENLTIAFAGFTADARVLIEKARIEAQSYRLTCEDAPSIDYMARHIAKTQQSYTQRGGVRPFGVSSMISGFNADKSPQLYLTDPAGTYSAWKANAIGGRNEKAVQEFLEKNWTASLAEADAIRLTVKALLEVVDSGSKNMELAVSRYGQPVRILKEEELEVIIADIEREIEEAKKEAAG 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig837.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW08_ECTSI1.270e-15895.97Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A6S9E6K7_HETAK8.870e-13179.03Proteasome subunit alpha type n=2 Tax=Heterosigma ... [more]
A0A835Z7L7_9STRA4.740e-12175.90Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
W7TRL4_9STRA7.260e-11572.69Proteasome subunit alpha type n=2 Tax=Monodopsidac... [more]
A0A7S2F6I3_9STRA4.840e-11371.26Proteasome subunit alpha type n=2 Tax=Dictyocha sp... [more]
A0A7S2RQS1_9STRA4.300e-11271.01Proteasome subunit alpha type n=1 Tax=Rhizochromul... [more]
A0A7S1FT14_9STRA4.130e-10970.04Proteasome subunit alpha type n=1 Tax=Corethron hy... [more]
A0A7S2EX89_TRICV2.590e-10867.98Proteasome subunit alpha type n=1 Tax=Trieres chin... [more]
A0A7R9UBV5_9STRA6.040e-10771.12Proteasome subunit alpha type n=1 Tax=Pinguiococcu... [more]
A0A7S3M1D5_9STRA7.230e-10768.18Proteasome subunit alpha type n=1 Tax=Spumella elo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig837contigP-littoralis_Contig837:75610..80001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW08
Preferred namePSMA7
PFAMsProteasome,Proteasome_A_N
Model size1654
Max annot lvl2759|Eukaryota
KEGG koko:K01191,ko:K02731
KEGG Pathwayko00511,ko03050,map00511,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005819,GO:0005829,GO:0005839,GO:0005840,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009524,GO:0009536,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030071,GO:0030163,GO:0031090,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0036211,GO:0042175,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044464,GO:0045202,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0098588,GO:0098794,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990111,GO:1990904,GO:2001252
Exons7
Evalue4.62e-72
EggNOG OGsCOG0638@1|root,KOG0183@2759|Eukaryota
Ec32 ortholog descriptionproteasome subunit alpha type 7
Ec32 orthologEc-01_002900.1
EC3.2.1.24,3.4.25.1
Descriptionthreonine-type endopeptidase activity
Cds size381
COG categoryO
CAZyGH38
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig837.19.2prot_P-littoralis_Contig837.19.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig837 76517..78374 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791700.9753451-UTR-P-littoralis_Contig837:75609..765161680791700.9753451-UTR-P-littoralis_Contig837:75609..76516Pylaiella littoralis U1_48UTRP-littoralis_Contig837 75610..76516 -
1680791701.0409968-UTR-P-littoralis_Contig837:78374..784301680791701.0409968-UTR-P-littoralis_Contig837:78374..78430Pylaiella littoralis U1_48UTRP-littoralis_Contig837 78375..78430 -
1680791701.0574174-UTR-P-littoralis_Contig837:78735..788051680791701.0574174-UTR-P-littoralis_Contig837:78735..78805Pylaiella littoralis U1_48UTRP-littoralis_Contig837 78736..78805 -
1680791701.075138-UTR-P-littoralis_Contig837:79183..793421680791701.075138-UTR-P-littoralis_Contig837:79183..79342Pylaiella littoralis U1_48UTRP-littoralis_Contig837 79184..79342 -
1680791701.0887468-UTR-P-littoralis_Contig837:79920..800011680791701.0887468-UTR-P-littoralis_Contig837:79920..80001Pylaiella littoralis U1_48UTRP-littoralis_Contig837 79921..80001 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791700.991933-CDS-P-littoralis_Contig837:76516..766151680791700.991933-CDS-P-littoralis_Contig837:76516..76615Pylaiella littoralis U1_48CDSP-littoralis_Contig837 76517..76615 -
1680791701.0021348-CDS-P-littoralis_Contig837:77363..774381680791701.0021348-CDS-P-littoralis_Contig837:77363..77438Pylaiella littoralis U1_48CDSP-littoralis_Contig837 77364..77438 -
1680791701.0125287-CDS-P-littoralis_Contig837:77878..780161680791701.0125287-CDS-P-littoralis_Contig837:77878..78016Pylaiella littoralis U1_48CDSP-littoralis_Contig837 77879..78016 -
1680791701.0267646-CDS-P-littoralis_Contig837:78305..783741680791701.0267646-CDS-P-littoralis_Contig837:78305..78374Pylaiella littoralis U1_48CDSP-littoralis_Contig837 78306..78374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig837.19.2

>prot_P-littoralis_Contig837.19.2 ID=prot_P-littoralis_Contig837.19.2|Name=mRNA_P-littoralis_Contig837.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp
MRPFGVSSILAGFSQDGAPQIYQTDPAGTYSAWKANAIGGSNSNNMREFL
EKNWVNDMDEATAKKLCMKALLEVVDSGAKNMEIAIVRSGQANEMMTEET
MQAVAAELEAEAEAAKAATAGDVQMT*
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mRNA from alignment at P-littoralis_Contig837:75610..80001-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig837.19.2 ID=mRNA_P-littoralis_Contig837.19.2|Name=mRNA_P-littoralis_Contig837.19.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4392bp|location=Sequence derived from alignment at P-littoralis_Contig837:75610..80001- (Pylaiella littoralis U1_48)
AGGTACGACCGAGCCATCACGGTGTTCTCGCCTGATGGACACCTCTTCCA AGTGGAGTACGCCATCGAGGCCGTCAAAAGGGTGAGTTAGGTGTGACAGC GGTTCGACACGTTATTCTCGCCCCCCGTCTAGGGTTTTTGACTTGAACGT GTGCATGGGACGTAGATCGTCATATCCAAGGACCTGTTGCTTTTGATGAT GCAAACGTCTTTTGTCAGGCAGCTATCATTGTAGGTTGGCGCGGTATCCC GTGGATAATATCTTACTTGCATGCATACACATTGTGATGTAAAGGAAACA CAAGAGCGCATCCCTTCGAATTATTACTGCTCTTTGATAAATCCTCGTCT AGAGAGAGAAGCATAAGTAGCCACTGATGTCTTCGTAGGAACAACAATGA AGAATCTAAGTGTCGCCGGCAAAGATTGATTATTCTTGTTGATCACGTGG TGTAATATACGCAATCTGTTGACATTTTCGCAAGAGGAATCGATTTTGCT CAACCCTCACTCTCATTTTTTTTTTCCGTCTTCCCGAGGCACACCCACCC ACCGACCTTTAACCCCCACTAGCCCAATATCTACCAGTACCCCGAACCCA GCGTGTGCCGATCACAAACATTTCGTTCTTGCTGCTTTCATCGTTGCCGT TTCTTGCAGGGATCCTCGGTGGTCTGCGTCAAGGGCAAGGACTGCGTGGT GTTGGGGGTAGAGAGGCGGGCGACGGCCAAGCTTCAGGACCCTCGCACGA TCCGCAAGATTGTCAAGATTGACAGCCACATCACGCTGGCTTTCGCAGGG CTCACCGCCGACGCACGTGTAAGCTTTCCATGATGCTGCTGCCGTTTGTT TTTAGGCGGGGGATTGCTGCTGCTGCTGATGTTCGTGTACCGTTTACTTC GTATCGTCTTAAACATTTGCCCCTCTCTAGTGCTTGCTGCTGCGGCGCTG TTGGTATCGTCTTCAAAATTCGCCCGTCGTTGTCAGTGGTTGTTGTACTG TTGTGGCAATACTTCAAAGTATCATATGACGGGTAGTGGTCGATGAGAGT GAGCGGAAACTTCGAAAGGGTACCTTGGTCCGAAGACTACGATAATGCTG CATCGCCAACAGCAGTAGTGAAGGGATACATCATGACCACTTTTCCGGGG TTGTTTTTATGCTCTTTTCTTTTTTTATCGTATCGCCTTTGTTCAGGTTT TGGTGGACAAGGCGCGGCTGGAGTGCCAGAGCTACCGGCTCACCTGCGAG GACGCTCCTTCTATCGGTGAGGCAACCAACCAACCCTTCGATGGGGACGA TCTCATTTCAAGGCGTACTACATCATGCAGACACGACCGCTGTTGTGAGC GATGGCTTAGGGTTGCGAACTCATCCCAGCAGTTTGGCGCTCCGCCCCAT ACGGCGGGAGGGTGTGGTGACAGTATTGTATACGGAAACCGCGACGCTGC TCCCCGAGGTCCCTCTTATACCTCGCGACATACACGAACGCGCTTCTTCC GCTAAACCCCCTAACTTTGGTTGCTTTTCGGTTGCGCTTCTGGCGTGGAA TAATCTGGTATGGCGTGGCAGAGTACGTCGCGCGCTTCATCGCCCGCACG CAGCAGCGCTACACACAGCGCGGTGGTATGCGACCGTTCGGGGTTTCCTC CATCCTGGCCGGCTTTTCGCAGGACGGGGCTCCTCAGATCTACCAGGTGC GCGCGCGCGCCCGACCCATCTTATTTTACCGTGCACCTTATTCCACCATT GCTGTTTCCGTCGAAATTTAGTGGAAATTTACTAATAGCCATGCGTTCTC TTCATCTTGAGTCAATTTCACAACAGTAGCATCCGGGTTATCAGTACTGT AGGCTTTTTGGAAAGGCGCTTTACTCGTTGTAGCTGCGCGGAATATATTG CAATAATCGTCGGTGACGGAACCCCCGCCCCCGCCCCCCCCGCCCCCGCC CTCCCGTCACCTTCTTACGGGATGGGACGTATTAGACTGACCCAGCCGGA ACGTACTCGGCGTGGAAAGCCAATGCTATCGGCGGGAGCAACAGCAACAA CATGCGGGAGTTTTTGGAGAAGAACTGGGTGAATGACATGGACGAGGCCA CGGCGAAGAAGCTGTGCATGAAGGTGAGCTGCACGTCGTCGTCGTAGTTG CGTGTGAGGTACCATTAGGAGGTCTGTTGGCAGACAGGCAGGCAGCCCCA CGATGTGCAAGACGCACGATCACGGTGGTCGCTTCTGCAAGCGCCTGACG AACCATCAGGGCTGCAATCCCAGTCGACTTTTAGAGGCTGCAAAGTCCAC CAATAGATTCGATCGCAAACACCAGTAGGCAGCGGCAAACCGGTACCCCC CCCCCCCCCCCCCACCCGCCACTGATCCGAAGCTCTAATTTCCCGGCAAG CCTCCTCACATGGTGGCGTTACGCCCCCCTCCCCCTGCGCTGTCGTTCTT CGCGTGCCGCCGGCCACCTCGCACGGTGTAAAACTTGCTGCCCGTCGCAT GGCACGGAATGGCCTGGTGTGGTGTGGTGTGATATGATGTGCTGGCCCTG GTCGTGAGTGCAGGCGTTGCTGGAGGTGGTAGACTCGGGGGCAAAGAACA TGGAGATCGCGATCGTCCGGTCCGGGCAAGCCAATGAGGTGTGGTACACT TTGCAGTATTTCAGGATTGTTGAGCTGATAGGTGTACCTCACACGGTTCC GGTGTGGATAAATATAGTTGTGATATGAGTCGACAGAATGGTACGATGTT AAGAGAATCGTGGGGAACGTATCATGTATTGATGAGAATATATTCCGTAT CGTTGTCGTTGCTAGAAAATGTTAAACCCTCTTCATGACGAGCACGACAT GAACGTCCTGATCCAATGATGGCCACTTACTTTTTTGCTCCGTTGGACAA CACGCTACCCCCCTCGAGAAAACCACGCACGCTCGGGAGCCAATCAAAGT AGTTGAATCTCTGAGGTAAATGGACACGAGAGTAACCAACATTGTGGTCG CAGATGTATGATACGCATATCTTGAGGTTTTTGCTTATGAGCCTACGACA CCCAACCCCCACTTACAATTCCTAGATTTCACGTGTCCTCACTACAAATA TGTTCATGAGATGCTCGACATTTATGCCTTCTTGACATTAATGTTTGCTT TGCTTTACATTCCAAAGGTACGAAGCAGATAGTGTTTTAATACGTTTGAC AAAGTAGTCTTCTGTGTCTAGTCTGTATCGGAAGTCTGTTTTCTGCCTGT CTTTTCGCGGGAATGTCTCGGTCGTTCTGGATTACGCTCTTTTGCTGCTT GAACCAACGAAAGTCTGTGCTGGGCGTCTGTCCGCCCCTGGTCTTTTTTT CTTTGTGGATGGATGGTGGGTGTTGAAATGTGATAGATGATGACGGAGGA GACGATGCAGGCGGTAGCGGCCGAGCTGGAGGCGGAAGCGGAGGCAGCAA AGGCGGCCACAGCGGGAGACGTGCAAATGACGTAGGACGCGTCTGGTCTT GTTGTCTCCCCTCAAGAGTCAAGAAGGCTGTCTGCGCTTTATCTCTTCGT GCCTATGCACGCCAGGCAGGCCTTCGGCGGTAGACTTGCAAAATGAGGCC TCCTTGCTATGGATGGGCACTCATTTCGGCCGGGGAGGGTGGGGAGTCAT CCGTGCGATACGAGCGACGCGACTCATGAAAATTTAGCAACACCGTTTCT GTATGGCATGTTTTTTTTATGCCGATCGATGCCACATGTAAAGCCGTCTG GTGGGTACGCTGGAGGGGGCACGGCGGAGGAACGGCTGGGGGGCAGCCAA TGCCGGTTACTAATGTGCTTGTGGCTGCGTTGGGAGAGGGGGGGTGGTAC GCGAATGAATTGCCATCGTCCTGAGCGCGTCAGTGGTTTTGTTGGTTCAT GGTGTTTTTCGCGTTCCTTGGTCTTCCCTTCGTACCCCACAATACATACA GCGGTAGTATCAGCGAGTGCACCGCCCACTGACTGCTCAAATGAACAACT TGCAAGCGGCCCACCAACCCGCTTTTCGTTTAGGGGATGATTACGATGCG AGTTGCAACAAAGTCACTACCCCATACTACGGCAATCGAGGTGGCTGTCG CAGCGAGCACGCGGGTTTGTTCCACTACATCTTCTCGTGTAGCACCTGTG GGCACAACAACGGCCCAAAAGTACCAGTGAGTTGACAGGTGCTGTGAACC TTTGCCTGCCGTCGTAAATACTTGTTGAACAAGACTGGAATGGGCTGGGT GTCGAGTGAAGCACCGCCGTCGCACACACCATGCTTTCGGTTTTGGCGTA TCTGTCAAGGAGGTGTCACGTGCGCTCGAGGCAATCCTGGGTACGGCTGT CTTGGCACGCCATTAGTAATCAAAAACACGCAGCTACACGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig837:75610..80001-

>mRNA_P-littoralis_Contig837.19.2 ID=mRNA_P-littoralis_Contig837.19.2|Name=mRNA_P-littoralis_Contig837.19.2|organism=Pylaiella littoralis U1_48|type=CDS|length=381bp|location=Sequence derived from alignment at P-littoralis_Contig837:75610..80001- (Pylaiella littoralis U1_48)
ATGCGACCGTTCGGGGTTTCCTCCATCCTGGCCGGCTTTTCGCAGGACGG
GGCTCCTCAGATCTACCAGACTGACCCAGCCGGAACGTACTCGGCGTGGA
AAGCCAATGCTATCGGCGGGAGCAACAGCAACAACATGCGGGAGTTTTTG
GAGAAGAACTGGGTGAATGACATGGACGAGGCCACGGCGAAGAAGCTGTG
CATGAAGGCGTTGCTGGAGGTGGTAGACTCGGGGGCAAAGAACATGGAGA
TCGCGATCGTCCGGTCCGGGCAAGCCAATGAGATGATGACGGAGGAGACG
ATGCAGGCGGTAGCGGCCGAGCTGGAGGCGGAAGCGGAGGCAGCAAAGGC
GGCCACAGCGGGAGACGTGCAAATGACGTAG
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