mRNA_P-littoralis_Contig834.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: Q6XM36_9PHYC (FirrV-1-A51 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM36_9PHYC) HSP 1 Score: 452 bits (1164), Expect = 5.360e-148 Identity = 287/662 (43.35%), Postives = 394/662 (59.52%), Query Frame = 1
Query: 7 TTVTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSANIKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGET--SLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGSSVSQGT-GSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGFTSRTAGGVFGQMNQTTV-TLVRNLATFPSGVNGTFVGGVVGYV-FFSSFEKGLNAMKGDVSGTKNVXXXXXXXRHNNASQSVHTLINSMQGNVSGPGSSAYVGGIVGLLDHESN-LYHTFLNYMAGDITCELTLTNRCGGLVGRSENDPNIATSINAMKGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLVDGHSTTSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGN-DTALDLAPRPLSIKASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSKFVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
TT+TWV DSNSKYE+SSK+HL+Q+MN+G LYTNAG++P DF DY+QT DID ++S N+ PI KFKG YDG+++ I N+SY DP F TA + GLFG + A +KN+++ G ++G S+ G++ G S ++N+ C GSS+ Q + S T+ GGV+G + + GITL GE+ + + T GG+ G N +V TL+RNLATFPS + G VGGV+G F +S K LNAM GD+ G + N SQ + L+ SM+GN++ P +A GG+ G + +E++ Y T LNYM GDI + ++ TS+ AM GYV V +A VD SFGLTY +D TT A++GLP D + LP+ L GTD G YAW FV+GN + L P+PL I +F AV GA AY+LT + + D+ V TGFTDL + + L PETEY + LYS+TDGT Y SATT AN +N+ SDF N+SG YDLS+F + ++++A LF+TGD +VV VG T+KFVK GE SIVGE AL +PF TA QSA++TLSDNS+VTL+FDE+ T+ + G +Y+ G+ +VD +K+T +
Sbjct: 4 TTITWVRDSNSKYEVSSKEHLLQIMNNGTLYTNAGTSPGDFWRVDYIQTTDIDFASNSTNVVPI----EKFKGTYDGDNYEIRNYSYEDPEFNTANNCIN-FAGLFGYVLGAAAEVKNLKLTGRWNVKGVHSSGGLLAGYCYISKVANITCSLDAGSSIEQDSITSDTYPKVGGVIGQTDTATVQGITLEGEVSVICSPSATRAYVGGIIGSANSNSVVTLLRNLATFPSTLKGGEVGGVIGRCQFATSISKCLNAMTGDIEGDTLAGGVIGMGQTGNNSQVLDYLVCSMRGNIT-PVGNARAGGVFGGIQYENDHTYTTLLNYMTGDIXXXXXXXXXXXX----TGTTYSVNTSMVAMNGYVKFAAVFEDPGIVIAH-------VDPSFGLTYTIDHGITTDALSGLPIDSESI-LPYFDLTGTDNYGTSYAWEFVFGNLPEGMTLVPKPLFIDVTFAAVSGAIAYKLTKKTTTATDEI--DVATGFTDLAQRVRDLQPETEYTISLYSSTDGTTYTPAGTASATTLANVSSNYSASDFSNESGKYDLSKFGKSSRSQLFQLAGTLFSTGDNLVVPVGSGNKTTKFVKVGENTSIVGEEALFIPFNETA---QSANITLSDNSTVTLSFDESDNTVEIGGEKYASGESTIVDQQKLTIVSI 642
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: B5LWE4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE4_9PHYC) HSP 1 Score: 452 bits (1162), Expect = 1.320e-147 Identity = 288/663 (43.44%), Postives = 389/663 (58.67%), Query Frame = 1
Query: 13 VTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSANIKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGT-ATETYETYVGLFGET-SLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGSSVSQGTGSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGFTSRTAGGVFGQMNQTTVTLVRNLATFPSGVNGTFVGGVVGYVFFSSFEKGLNAMKGDVSGTKNVXXXXXXXRHNNASQSVHTLINSMQGNVSGPGSSAYVGGIVGLLDHESNLYHTFLNYMAGDITCELTLTNRCGGLVG-RSENDPNIATSINAMKGYVDNTVVGTVSSAGVA-SSASLAITVDASFGLTYLVDGHST----TSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGNDTALDLAPRPLSIKASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDG-TQYDLHLEDSATTTANSVANHQMSDFRNQS-GAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSKFVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
VTWVL+ +SKYE+SSK+HL QLM++G+LYTN GS P++FMSAD+VQT +IDL ND NI+PIG++ FKG YDG + +I NWSYT F T +T+ + YVGLFG LKNIRM GVC L G+ + G++ G + +TISN++ + GS + QG + GGVVG GGS YG+TL GEL++ ++ G V G T VTLVRNLA F S V G VGGV G + K LNAM+G + R +SQ V L+NSM G++ G+ + GIVG L N + +LNYM+GDI + +R G++G R D ++NAMKG + AG+ + +D FGLTY D ST T + DP+ LP +L GTD V Y W FV+GN+T ++ RPL + FG V GAT YRLT Q + +T TV T F+ K SL E+ Y+ R+YS TD ++Y L + S TT AN +N+ D++ + +DLS FD + +E+ NE+F TGDA+V+ +G +KFVK G + I GESA+L+PF T G++Q+ASLTLSDNSSVTLT+DE GTIG+ G +YSPG+ +VD +K+T EV
Sbjct: 3 VTWVLNGDSKYEVSSKEHLHQLMHNGSLYTNEGSVPSNFMSADFVQTVEIDLENDDTNIQPIGLSDDSFKGSYDGANLSIKNWSYTATGFDTGSTDDFLAYVGLFGYVFHPCVLKNIRMTGVCTLRGFTTFGGILLGYSNSATISNIDLELDEGSLIEQGDVPNGYSNMGGVVGQLAGGSMYGVTLSGELDVVPGPNMATQAVGCVIGYAGNTIVTLVRNLAKFTSTVTGYNVGGVFGDSSAVTITKVLNAMEGSLLAAMFAGGIFGKLRTTGSSQVVGELVNSMNGDIEVTGAG-FCAGIVGYLYSSLN-HDKWLNYMSGDIVS--AVASRSAGIIGQRVAADYTFTNTLNAMKGSTYH--------AGLPYDHGETMVYIDTEFGLTY-TDSLSTALFSTMDTSAFTLDPET-SLPVIALTGTDSESVAYDWEFVFGNNTTIEFVARPLHVDVKFGEVPGATQYRLTKQLSPDGVET--TVDTDFSTFEKRAESLQSESVYVFRVYSRTDPESEYTLAYQSSTTTLANVSSNYSAGDYKAEGEDQFDLSSFDKDTMANFHEVMNEVFDTGDAIVIPIGSETKKTKFVKLGGSVPIDGESAVLIPFLETGGSAQTASLTLSDNSSVTLTYDETAGTIGIGGVDYSPGESTIVDSQKLTLVEV 649
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: Q8QNC2_ESV1K (EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC2_ESV1K) HSP 1 Score: 281 bits (720), Expect = 1.580e-78 Identity = 242/748 (32.35%), Postives = 354/748 (47.33%), Query Frame = 1
Query: 4 STTVTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSANIKPIGV-TASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGSSVSQGTGSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGFTSRTAGGVFGQMNQTTVTLVRNLATFPSGVNGTFVGGVVGYVFFSSFEKGLNAMKGDVSGTKNVXXXXXXXRHNNASQSVHTLINSMQGNVSGPGSSAYVGGIVG-LLDHESNLYHTFL-NYMAGDITCELTLT------NRCGGLVGRSENDPNIATSINAMKGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLV--DGHSTTSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGN----------------------------------------------------------DTALDLA-------------------PRPLSIKASFGAVGGATAY-RLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTD-GTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSK--FVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
STT+TWV S ++YE+S+K+HL+QLM+ G LY N PTD+ SA Y+QTADIDL++D +I PIGV T + F G+YDG S+ ISNW T+ + T GLFGE SLK++R+ GV G S G + G++ + + +VE DFA G+++ T S T TG + G YG T+RG +E+ ++T RT GGV G T VT+ RN+ATF G+ G GGV+G+ + +NAM+G++ G+ NA ++ GGIVG + + NL T L N+ +R GL G D + + SI AM G V+ V GT A A VD FG+T+ D S+ +A+ G TDP + +L + L GTD +G Y+W FV+ N D++ D+ PR L+IK ++ A +LT Q++ ++ V H FTD K + L ET Y +RLY+ G +Y L +D TT AN N+ ++DF + SGAYD+S+ D SV N+LF+TG +V V++ + K FVKRG S+ E ALLLPF+S++G +QSA++TLSD + G ++ G +++DG+K+T ++
Sbjct: 499 STTLTWV-KSGAQYEVSTKEHLLQLMHQGLLYVNGNDPPTDYWSASYLQTADIDLIDDHEHITPIGVSTENPFSGDYDGGSYKISNWCSTEASDRT---------GLFGEVVGGSLKHLRLGGVWTSSGASSYRGFVCGKLDSAVVRDVEGDFAEGTAI---TNSATH--TGTLFGYVNDSEVYGATVRGSVEIEEST--NGRT-GGVVGHAVGTDVTMCRNVATFTKGITGDSAGGVIGFNDACNLSCLINAMQGNIVGSFAGGVCGQIFSGTNAXXXXXXXXXXXX-------XTSTAGGIVGRVFTRDDNLVFTKLANHXXXXXXXXXXXXXXFGQLSRFSGLTG----DISASNSIVAMNGAVEQAVRGTEDFTPSAIDA----VVDTGFGMTHAGGDDYASSNTALEGYTTDPSFTELSYFPLVGTDPDGTTYSWDFVFANIGGNASYSDYTHLSLHTGQVSAPLFADFGLSETNTQVYATYAHLGDKALFTDESFTVHDSSADVVFDYSKSTVLFGTAPALICDPRALNIKVLLSSLVDVGAVNKLTYQESGTLNEVV--AHENFTDTSKIVSGLKAETTYTIRLYTAAGLGLEYTLLGQDDCTTYANLAKNYDVADFVSASGAYDISDLDD----SVSSAMNDLFSTGASVEVAINDSKKSRKTTFVKRGGVISVANEEALLLPFDSSSGATQSATITLSDXXXXXXXXXXXXXXXEIGGVSFTHGQSLILDGKKVTVVDI 1207
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: B5LWG3_9PHYC (Putative LamG-like jellyroll protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG3_9PHYC) HSP 1 Score: 99.8 bits (247), Expect = 1.170e-18 Identity = 91/304 (29.93%), Postives = 147/304 (48.36%), Query Frame = 1
Query: 1066 KGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLVDGHSTTSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGNDTA-LDLAPRPLSIKASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSKF-VKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
K YVD T+ GT ++ SS++L I G + T GL ++ YD ++ + + Y ND A LD P + S+ ++YR+T + ASG + T T T +V N LTP T Y RLY +TD Y L + TT ++ AN MS F G Y+ S+ + + +E+ TGD++++ + F V RG T+ I +LL F + G+SQSA+L LSD ++V +T+D++V +I ++G G+ ++DG+K++ +V
Sbjct: 141 KVYVDGTLEGTRTATLDTSSSNLTIG----------KSGTNDTQNFVGLLSNFRVYDTELSATEILEA----------YENDFATLDGTPWSTLVDLSWSPKSFTSSYRITQEVASGGEITSVDATTSTTSIVYN---LTPSTTYTFRLYRSTDDVNYTLDRSEDVTTLDDTPANSNMSIFLTN-GVYNFSQLEETTQEILKNHIDEILVTGDSIIIDNDEFDNQAFFAVARGTTSEIPDSKPILLLFNPSKGSSQSATLELSDATNVIITYDDSVNSIVVDGITRFVGETFILDGKKVSVHDV 420
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: Q6XLW1_9PHYC (FirrV-1-E1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLW1_9PHYC) HSP 1 Score: 64.3 bits (155), Expect = 3.590e-7 Identity = 63/202 (31.19%), Postives = 100/202 (49.50%), Query Frame = 1
Query: 1378 TAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGR----AMTSKFVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
+ Y +TV + G + TV + TG T+ + ++L + Y RLYS DGT +L AT +S + MS + DLS F + + + + F T D + V V T+ FVK G++ + + +L PF + Q +L +SD+S+ TL FDE+ TI ++GA YS GD +V+DG+ T +
Sbjct: 238 STYDITVSENGGAEVTVASSVTG-TEF--SAYNLNDGSVYDFRLYS--DGTVLGRNLGQ-ATPVIDSTSLTSMSSVLSN----DLSVFTSDVVSEIQPLMDSSFETNDRIKVRVSVHNSTTVSTTTFVKSGDSIPL-NSNYILTPFVPNGSSGQFFNLEMSDSSTKTLEFDESNSTILIDGAAYSVGDTLVLDGKTCTLGSL 428
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: A0A3C0YPS8_9BACT (Glug domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3C0YPS8_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 1.760e-5 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 76 LMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSAN-IKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGS 471
L+++ A + G P D+ + + TAD+++ S + K IG T+ F G +DGN TISN +YT+P F Y+G+FG TS A++KN+ + V + G+ + AG + G + T SN F+ GS
Sbjct: 37 LISTAADVNSIGLDPNDW-NKYFKLTADVNMSAYSGSQYKIIGNTSKPFTGTFDGNGHTISNLTYTNPIFNYY------YIGMFGYTSYATIKNLGLENVNI-NGHCTGAGALIGYQDNGTDSNC---FSTGS 158
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: A0A1G2YF79_9BACT (Glug domain-containing protein n=1 Tax=Planctomycetes bacterium GWF2_42_9 TaxID=1801958 RepID=A0A1G2YF79_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 2.560e-5 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 76 LMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSAN-IKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGS 471
L+++ A + G P D+ + + TAD+++ S + K IG T+ F G +DGN TISN +YT+P F Y+G+FG TS A++KN+ + V + G+ + AG + G + T SN F+ GS
Sbjct: 37 LISTAADVNSIGLDPNDW-NKYFKLTADVNMSAYSGSQYKIIGNTSKPFTGTFDGNGHTISNLTYTNPIFNYY------YIGMFGYTSYATIKNLGLENVNI-NGHCTGAGALIGYQDNGTDSNC---FSTGS 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig834.7.1 >prot_P-littoralis_Contig834.7.1 ID=prot_P-littoralis_Contig834.7.1|Name=mRNA_P-littoralis_Contig834.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=658bp MSTTVTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQback to top mRNA from alignment at P-littoralis_Contig834:66062..68035+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig834.7.1 ID=mRNA_P-littoralis_Contig834.7.1|Name=mRNA_P-littoralis_Contig834.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1974bp|location=Sequence derived from alignment at P-littoralis_Contig834:66062..68035+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig834:66062..68035+ >mRNA_P-littoralis_Contig834.7.1 ID=mRNA_P-littoralis_Contig834.7.1|Name=mRNA_P-littoralis_Contig834.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1974bp|location=Sequence derived from alignment at P-littoralis_Contig834:66062..68035+ (Pylaiella littoralis U1_48)back to top |