mRNA_P-littoralis_Contig834.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig834.7.1
Unique NamemRNA_P-littoralis_Contig834.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: Q6XM36_9PHYC (FirrV-1-A51 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM36_9PHYC)

HSP 1 Score: 452 bits (1164), Expect = 5.360e-148
Identity = 287/662 (43.35%), Postives = 394/662 (59.52%), Query Frame = 1
Query:    7 TTVTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSANIKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGET--SLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGSSVSQGT-GSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGFTSRTAGGVFGQMNQTTV-TLVRNLATFPSGVNGTFVGGVVGYV-FFSSFEKGLNAMKGDVSGTKNVXXXXXXXRHNNASQSVHTLINSMQGNVSGPGSSAYVGGIVGLLDHESN-LYHTFLNYMAGDITCELTLTNRCGGLVGRSENDPNIATSINAMKGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLVDGHSTTSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGN-DTALDLAPRPLSIKASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSKFVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
            TT+TWV DSNSKYE+SSK+HL+Q+MN+G LYTNAG++P DF   DY+QT DID  ++S N+ PI     KFKG YDG+++ I N+SY DP F TA      + GLFG    + A +KN+++ G   ++G  S+ G++ G    S ++N+ C    GSS+ Q +  S T+   GGV+G +   +  GITL GE+ +  +   T    GG+ G  N  +V TL+RNLATFPS + G  VGGV+G   F +S  K LNAM GD+ G           +  N SQ +  L+ SM+GN++ P  +A  GG+ G + +E++  Y T LNYM GDI                +    ++ TS+ AM GYV    V       +A        VD SFGLTY +D   TT A++GLP D +   LP+  L GTD  G  YAW FV+GN    + L P+PL I  +F AV GA AY+LT +  +  D+    V TGFTDL + +  L PETEY + LYS+TDGT Y      SATT AN  +N+  SDF N+SG YDLS+F   +   ++++A  LF+TGD +VV VG    T+KFVK GE  SIVGE AL +PF  TA   QSA++TLSDNS+VTL+FDE+  T+ + G +Y+ G+  +VD +K+T   +
Sbjct:    4 TTITWVRDSNSKYEVSSKEHLLQIMNNGTLYTNAGTSPGDFWRVDYIQTTDIDFASNSTNVVPI----EKFKGTYDGDNYEIRNYSYEDPEFNTANNCIN-FAGLFGYVLGAAAEVKNLKLTGRWNVKGVHSSGGLLAGYCYISKVANITCSLDAGSSIEQDSITSDTYPKVGGVIGQTDTATVQGITLEGEVSVICSPSATRAYVGGIIGSANSNSVVTLLRNLATFPSTLKGGEVGGVIGRCQFATSISKCLNAMTGDIEGDTLAGGVIGMGQTGNNSQVLDYLVCSMRGNIT-PVGNARAGGVFGGIQYENDHTYTTLLNYMTGDIXXXXXXXXXXXX----TGTTYSVNTSMVAMNGYVKFAAVFEDPGIVIAH-------VDPSFGLTYTIDHGITTDALSGLPIDSESI-LPYFDLTGTDNYGTSYAWEFVFGNLPEGMTLVPKPLFIDVTFAAVSGAIAYKLTKKTTTATDEI--DVATGFTDLAQRVRDLQPETEYTISLYSSTDGTTYTPAGTASATTLANVSSNYSASDFSNESGKYDLSKFGKSSRSQLFQLAGTLFSTGDNLVVPVGSGNKTTKFVKVGENTSIVGEEALFIPFNETA---QSANITLSDNSTVTLSFDESDNTVEIGGEKYASGESTIVDQQKLTIVSI 642          
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: B5LWE4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE4_9PHYC)

HSP 1 Score: 452 bits (1162), Expect = 1.320e-147
Identity = 288/663 (43.44%), Postives = 389/663 (58.67%), Query Frame = 1
Query:   13 VTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSANIKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGT-ATETYETYVGLFGET-SLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGSSVSQGTGSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGFTSRTAGGVFGQMNQTTVTLVRNLATFPSGVNGTFVGGVVGYVFFSSFEKGLNAMKGDVSGTKNVXXXXXXXRHNNASQSVHTLINSMQGNVSGPGSSAYVGGIVGLLDHESNLYHTFLNYMAGDITCELTLTNRCGGLVG-RSENDPNIATSINAMKGYVDNTVVGTVSSAGVA-SSASLAITVDASFGLTYLVDGHST----TSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGNDTALDLAPRPLSIKASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDG-TQYDLHLEDSATTTANSVANHQMSDFRNQS-GAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSKFVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
            VTWVL+ +SKYE+SSK+HL QLM++G+LYTN GS P++FMSAD+VQT +IDL ND  NI+PIG++   FKG YDG + +I NWSYT   F T +T+ +  YVGLFG       LKNIRM GVC L G+ +  G++ G  + +TISN++ +   GS + QG     +   GGVVG   GGS YG+TL GEL++       ++  G V G    T VTLVRNLA F S V G  VGGV G     +  K LNAM+G +             R   +SQ V  L+NSM G++   G+  +  GIVG L    N +  +LNYM+GDI     + +R  G++G R   D     ++NAMKG   +        AG+        + +D  FGLTY  D  ST    T   +    DP+   LP  +L GTD   V Y W FV+GN+T ++   RPL +   FG V GAT YRLT Q +    +T  TV T F+   K   SL  E+ Y+ R+YS TD  ++Y L  + S TT AN  +N+   D++ +    +DLS FD     + +E+ NE+F TGDA+V+ +G     +KFVK G +  I GESA+L+PF  T G++Q+ASLTLSDNSSVTLT+DE  GTIG+ G +YSPG+  +VD +K+T  EV
Sbjct:    3 VTWVLNGDSKYEVSSKEHLHQLMHNGSLYTNEGSVPSNFMSADFVQTVEIDLENDDTNIQPIGLSDDSFKGSYDGANLSIKNWSYTATGFDTGSTDDFLAYVGLFGYVFHPCVLKNIRMTGVCTLRGFTTFGGILLGYSNSATISNIDLELDEGSLIEQGDVPNGYSNMGGVVGQLAGGSMYGVTLSGELDVVPGPNMATQAVGCVIGYAGNTIVTLVRNLAKFTSTVTGYNVGGVFGDSSAVTITKVLNAMEGSLLAAMFAGGIFGKLRTTGSSQVVGELVNSMNGDIEVTGAG-FCAGIVGYLYSSLN-HDKWLNYMSGDIVS--AVASRSAGIIGQRVAADYTFTNTLNAMKGSTYH--------AGLPYDHGETMVYIDTEFGLTY-TDSLSTALFSTMDTSAFTLDPET-SLPVIALTGTDSESVAYDWEFVFGNNTTIEFVARPLHVDVKFGEVPGATQYRLTKQLSPDGVET--TVDTDFSTFEKRAESLQSESVYVFRVYSRTDPESEYTLAYQSSTTTLANVSSNYSAGDYKAEGEDQFDLSSFDKDTMANFHEVMNEVFDTGDAIVIPIGSETKKTKFVKLGGSVPIDGESAVLIPFLETGGSAQTASLTLSDNSSVTLTYDETAGTIGIGGVDYSPGESTIVDSQKLTLVEV 649          
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: Q8QNC2_ESV1K (EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC2_ESV1K)

HSP 1 Score: 281 bits (720), Expect = 1.580e-78
Identity = 242/748 (32.35%), Postives = 354/748 (47.33%), Query Frame = 1
Query:    4 STTVTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSANIKPIGV-TASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGSSVSQGTGSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGFTSRTAGGVFGQMNQTTVTLVRNLATFPSGVNGTFVGGVVGYVFFSSFEKGLNAMKGDVSGTKNVXXXXXXXRHNNASQSVHTLINSMQGNVSGPGSSAYVGGIVG-LLDHESNLYHTFL-NYMAGDITCELTLT------NRCGGLVGRSENDPNIATSINAMKGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLV--DGHSTTSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGN----------------------------------------------------------DTALDLA-------------------PRPLSIKASFGAVGGATAY-RLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTD-GTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSK--FVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
            STT+TWV  S ++YE+S+K+HL+QLM+ G LY N    PTD+ SA Y+QTADIDL++D  +I PIGV T + F G+YDG S+ ISNW  T+ +  T         GLFGE    SLK++R+ GV    G  S  G + G++  + + +VE DFA G+++   T S T   TG + G       YG T+RG +E+ ++T    RT GGV G    T VT+ RN+ATF  G+ G   GGV+G+    +    +NAM+G++ G+             NA                    ++  GGIVG +   + NL  T L N+                  +R  GL G    D + + SI AM G V+  V GT      A  A     VD  FG+T+    D  S+ +A+ G  TDP + +L +  L GTD +G  Y+W FV+ N                                                          D++ D+                    PR L+IK    ++    A  +LT Q++   ++ V   H  FTD  K +  L  ET Y +RLY+    G +Y L  +D  TT AN   N+ ++DF + SGAYD+S+ D     SV    N+LF+TG +V V++     + K  FVKRG   S+  E ALLLPF+S++G +QSA++TLSD                + G  ++ G  +++DG+K+T  ++
Sbjct:  499 STTLTWV-KSGAQYEVSTKEHLLQLMHQGLLYVNGNDPPTDYWSASYLQTADIDLIDDHEHITPIGVSTENPFSGDYDGGSYKISNWCSTEASDRT---------GLFGEVVGGSLKHLRLGGVWTSSGASSYRGFVCGKLDSAVVRDVEGDFAEGTAI---TNSATH--TGTLFGYVNDSEVYGATVRGSVEIEEST--NGRT-GGVVGHAVGTDVTMCRNVATFTKGITGDSAGGVIGFNDACNLSCLINAMQGNIVGSFAGGVCGQIFSGTNAXXXXXXXXXXXX-------XTSTAGGIVGRVFTRDDNLVFTKLANHXXXXXXXXXXXXXXFGQLSRFSGLTG----DISASNSIVAMNGAVEQAVRGTEDFTPSAIDA----VVDTGFGMTHAGGDDYASSNTALEGYTTDPSFTELSYFPLVGTDPDGTTYSWDFVFANIGGNASYSDYTHLSLHTGQVSAPLFADFGLSETNTQVYATYAHLGDKALFTDESFTVHDSSADVVFDYSKSTVLFGTAPALICDPRALNIKVLLSSLVDVGAVNKLTYQESGTLNEVV--AHENFTDTSKIVSGLKAETTYTIRLYTAAGLGLEYTLLGQDDCTTYANLAKNYDVADFVSASGAYDISDLDD----SVSSAMNDLFSTGASVEVAINDSKKSRKTTFVKRGGVISVANEEALLLPFDSSSGATQSATITLSDXXXXXXXXXXXXXXXEIGGVSFTHGQSLILDGKKVTVVDI 1207          
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: B5LWG3_9PHYC (Putative LamG-like jellyroll protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG3_9PHYC)

HSP 1 Score: 99.8 bits (247), Expect = 1.170e-18
Identity = 91/304 (29.93%), Postives = 147/304 (48.36%), Query Frame = 1
Query: 1066 KGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLVDGHSTTSAVTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGNDTA-LDLAPRPLSIKASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGRAMTSKF-VKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
            K YVD T+ GT ++    SS++L I             G + T    GL ++   YD   ++ +  +           Y ND A LD  P    +  S+      ++YR+T + ASG + T     T  T +V N   LTP T Y  RLY +TD   Y L   +  TT  ++ AN  MS F    G Y+ S+ +      +    +E+  TGD++++        + F V RG T+ I     +LL F  + G+SQSA+L LSD ++V +T+D++V +I ++G     G+  ++DG+K++  +V
Sbjct:  141 KVYVDGTLEGTRTATLDTSSSNLTIG----------KSGTNDTQNFVGLLSNFRVYDTELSATEILEA----------YENDFATLDGTPWSTLVDLSWSPKSFTSSYRITQEVASGGEITSVDATTSTTSIVYN---LTPSTTYTFRLYRSTDDVNYTLDRSEDVTTLDDTPANSNMSIFLTN-GVYNFSQLEETTQEILKNHIDEILVTGDSIIIDNDEFDNQAFFAVARGTTSEIPDSKPILLLFNPSKGSSQSATLELSDATNVIITYDDSVNSIVVDGITRFVGETFILDGKKVSVHDV 420          
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: Q6XLW1_9PHYC (FirrV-1-E1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLW1_9PHYC)

HSP 1 Score: 64.3 bits (155), Expect = 3.590e-7
Identity = 63/202 (31.19%), Postives = 100/202 (49.50%), Query Frame = 1
Query: 1378 TAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYIVRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAGATRSVYEIANELFATGDAVVVSVGGR----AMTSKFVKRGETASIVGESALLLPFESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGRKMTFAEV 1971
            + Y +TV +  G + TV +  TG T+   + ++L   + Y  RLYS  DGT    +L   AT   +S +   MS   +     DLS F +     +  + +  F T D + V V         T+ FVK G++  +   + +L PF     + Q  +L +SD+S+ TL FDE+  TI ++GA YS GD +V+DG+  T   +
Sbjct:  238 STYDITVSENGGAEVTVASSVTG-TEF--SAYNLNDGSVYDFRLYS--DGTVLGRNLGQ-ATPVIDSTSLTSMSSVLSN----DLSVFTSDVVSEIQPLMDSSFETNDRIKVRVSVHNSTTVSTTTFVKSGDSIPL-NSNYILTPFVPNGSSGQFFNLEMSDSSTKTLEFDESNSTILIDGAAYSVGDTLVLDGKTCTLGSL 428          
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: A0A3C0YPS8_9BACT (Glug domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3C0YPS8_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.760e-5
Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query:   76 LMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSAN-IKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGS 471
            L+++ A   + G  P D+ +  +  TAD+++   S +  K IG T+  F G +DGN  TISN +YT+P F         Y+G+FG TS A++KN+ +  V +  G+ + AG + G   + T SN    F+ GS
Sbjct:   37 LISTAADVNSIGLDPNDW-NKYFKLTADVNMSAYSGSQYKIIGNTSKPFTGTFDGNGHTISNLTYTNPIFNYY------YIGMFGYTSYATIKNLGLENVNI-NGHCTGAGALIGYQDNGTDSNC---FSTGS 158          
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Match: A0A1G2YF79_9BACT (Glug domain-containing protein n=1 Tax=Planctomycetes bacterium GWF2_42_9 TaxID=1801958 RepID=A0A1G2YF79_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.560e-5
Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query:   76 LMNSGALYTNAGSAPTDFMSADYVQTADIDLLNDSAN-IKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATETYETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVECDFAPGS 471
            L+++ A   + G  P D+ +  +  TAD+++   S +  K IG T+  F G +DGN  TISN +YT+P F         Y+G+FG TS A++KN+ +  V +  G+ + AG + G   + T SN    F+ GS
Sbjct:   37 LISTAADVNSIGLDPNDW-NKYFKLTADVNMSAYSGSQYKIIGNTSKPFTGTFDGNGHTISNLTYTNPIFNYY------YIGMFGYTSYATIKNLGLENVNI-NGHCTGAGALIGYQDNGTDSNC---FSTGS 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig834.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Q6XM36_9PHYC5.360e-14843.35FirrV-1-A51 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWE4_9PHYC1.320e-14743.44Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q8QNC2_ESV1K1.580e-7832.35EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
B5LWG3_9PHYC1.170e-1829.93Putative LamG-like jellyroll protein n=1 Tax=Feldm... [more]
Q6XLW1_9PHYC3.590e-731.19FirrV-1-E1 n=1 Tax=Feldmannia irregularis virus a ... [more]
A0A3C0YPS8_9BACT1.760e-534.59Glug domain-containing protein n=1 Tax=Phycisphaer... [more]
A0A1G2YF79_9BACT2.560e-534.59Glug domain-containing protein n=1 Tax=Planctomyce... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig834contigP-littoralis_Contig834:66062..68035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog888060.HMPREF9081_2426
PFAMsHaemagg_act
Model size1974
Max annot lvl909932|Negativicutes
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.37e-05
EggNOG OGsCOG3210@1|root,COG3210@2|Bacteria,1UW2D@1239|Firmicutes,4H6X2@909932|Negativicutes
Descriptionhaemagglutination activity domain
Cds size1974
COG categoryU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791698.4682157-CDS-P-littoralis_Contig834:66061..680351680791698.4682157-CDS-P-littoralis_Contig834:66061..68035Pylaiella littoralis U1_48CDSP-littoralis_Contig834 66062..68035 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig834.7.1prot_P-littoralis_Contig834.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig834 66062..68035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig834.7.1

>prot_P-littoralis_Contig834.7.1 ID=prot_P-littoralis_Contig834.7.1|Name=mRNA_P-littoralis_Contig834.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=658bp
MSTTVTWVLDSNSKYEISSKDHLVQLMNSGALYTNAGSAPTDFMSADYVQ
TADIDLLNDSANIKPIGVTASKFKGEYDGNSFTISNWSYTDPNFGTATET
YETYVGLFGETSLASLKNIRMAGVCVLEGYGSNAGMIGGQISDSTISNVE
CDFAPGSSVSQGTGSGTWLTTGGVVGLSRGGSAYGITLRGELEMHDNTGF
TSRTAGGVFGQMNQTTVTLVRNLATFPSGVNGTFVGGVVGYVFFSSFEKG
LNAMKGDVSGTKNVGGVVGYVRHNNASQSVHTLINSMQGNVSGPGSSAYV
GGIVGLLDHESNLYHTFLNYMAGDITCELTLTNRCGGLVGRSENDPNIAT
SINAMKGYVDNTVVGTVSSAGVASSASLAITVDASFGLTYLVDGHSTTSA
VTGLPTDPDYYDLPFASLDGTDGNGVVYAWAFVYGNDTALDLAPRPLSIK
ASFGAVGGATAYRLTVQKASGDDDTVRTVHTGFTDLVKNIHSLTPETEYI
VRLYSTTDGTQYDLHLEDSATTTANSVANHQMSDFRNQSGAYDLSEFDAG
ATRSVYEIANELFATGDAVVVSVGGRAMTSKFVKRGETASIVGESALLLP
FESTAGTSQSASLTLSDNSSVTLTFDENVGTIGLEGAEYSPGDFVVVDGR
KMTFAEV*
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mRNA from alignment at P-littoralis_Contig834:66062..68035+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig834.7.1 ID=mRNA_P-littoralis_Contig834.7.1|Name=mRNA_P-littoralis_Contig834.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1974bp|location=Sequence derived from alignment at P-littoralis_Contig834:66062..68035+ (Pylaiella littoralis U1_48)
ATGTCGACCACCGTCACCTGGGTGTTGGACTCGAACTCCAAGTATGAGAT CTCCTCCAAAGACCACCTGGTTCAGCTCATGAACAGTGGCGCCCTCTACA CGAACGCGGGGTCCGCCCCTACCGACTTCATGAGCGCCGACTACGTGCAG ACCGCCGATATTGATCTGTTGAACGACAGCGCGAACATCAAGCCGATCGG CGTAACCGCCTCCAAGTTCAAGGGCGAGTACGACGGAAACAGCTTCACCA TCTCGAACTGGTCGTACACGGACCCGAACTTCGGCACCGCCACCGAAACG TACGAAACTTACGTCGGTCTGTTCGGGGAGACATCCTTGGCAAGCCTGAA AAACATCCGCATGGCGGGGGTGTGTGTCCTCGAGGGATACGGTAGCAACG CAGGCATGATCGGCGGGCAAATAAGCGATTCAACCATTTCCAACGTGGAA TGCGACTTCGCACCCGGCTCTTCCGTGTCGCAGGGCACGGGATCCGGGAC GTGGCTGACAACGGGAGGTGTCGTGGGCCTTTCGAGGGGGGGTAGCGCGT ACGGCATCACCCTCCGCGGCGAGCTCGAGATGCACGACAACACCGGTTTC ACGAGCCGTACCGCCGGAGGGGTGTTCGGACAAATGAACCAGACCACCGT GACGTTGGTGAGGAACCTTGCGACTTTCCCGTCCGGAGTGAACGGAACCT TCGTTGGCGGGGTTGTTGGTTACGTGTTCTTTTCTTCTTTCGAGAAGGGC TTGAACGCCATGAAAGGGGACGTGTCTGGTACAAAGAACGTTGGCGGCGT TGTTGGTTACGTCAGGCACAACAACGCGTCCCAGTCCGTACACACGCTCA TCAACTCGATGCAAGGAAACGTTTCTGGGCCAGGAAGTTCTGCATATGTT GGTGGGATCGTGGGTCTCTTGGACCACGAAAGCAACTTGTACCACACCTT CCTGAACTACATGGCCGGGGACATTACATGCGAGCTGACCCTGACAAACA GGTGTGGAGGGCTGGTGGGTAGATCCGAGAACGACCCGAACATCGCAACG TCGATCAATGCCATGAAGGGGTACGTGGACAACACGGTCGTCGGGACGGT GTCGTCCGCCGGGGTGGCGTCGTCCGCGTCGCTGGCCATCACCGTCGACG CCAGCTTCGGGCTCACGTACCTCGTCGACGGCCACAGCACCACGAGCGCG GTCACCGGACTCCCGACAGACCCGGACTACTACGACCTCCCGTTCGCGAG CCTGGACGGCACGGACGGCAACGGGGTGGTGTACGCGTGGGCGTTTGTGT ACGGAAACGATACGGCGCTGGACCTCGCTCCGAGGCCGTTGAGCATAAAG GCTTCTTTCGGGGCCGTGGGGGGCGCGACGGCCTACCGGCTCACCGTGCA GAAGGCGAGCGGCGACGACGACACGGTGAGGACCGTGCACACGGGCTTCA CCGACCTCGTGAAAAACATCCACTCCCTCACACCGGAGACGGAGTACATC GTCCGGCTCTACTCGACGACGGACGGCACACAGTACGATCTCCACCTGGA GGACAGCGCCACCACGACGGCAAACTCGGTCGCGAACCACCAGATGTCGG ACTTTAGGAACCAGAGCGGGGCGTACGATCTGTCCGAGTTCGACGCGGGA GCGACGAGGTCGGTCTATGAGATTGCGAACGAACTCTTTGCGACGGGCGA CGCCGTGGTCGTTTCGGTCGGTGGGCGAGCGATGACATCAAAGTTCGTCA AGCGGGGAGAGACGGCCTCCATCGTGGGAGAGAGCGCGCTCCTTCTCCCG TTCGAATCGACAGCGGGGACCTCTCAATCGGCTTCGCTTACGCTCTCGGA CAACTCGTCCGTGACCCTCACCTTCGACGAGAACGTCGGCACAATTGGTT TGGAGGGGGCGGAGTACTCCCCTGGGGACTTTGTCGTGGTAGACGGCCGC AAGATGACGTTCGCGGAAGTTTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig834:66062..68035+

>mRNA_P-littoralis_Contig834.7.1 ID=mRNA_P-littoralis_Contig834.7.1|Name=mRNA_P-littoralis_Contig834.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1974bp|location=Sequence derived from alignment at P-littoralis_Contig834:66062..68035+ (Pylaiella littoralis U1_48)
ATGTCGACCACCGTCACCTGGGTGTTGGACTCGAACTCCAAGTATGAGAT
CTCCTCCAAAGACCACCTGGTTCAGCTCATGAACAGTGGCGCCCTCTACA
CGAACGCGGGGTCCGCCCCTACCGACTTCATGAGCGCCGACTACGTGCAG
ACCGCCGATATTGATCTGTTGAACGACAGCGCGAACATCAAGCCGATCGG
CGTAACCGCCTCCAAGTTCAAGGGCGAGTACGACGGAAACAGCTTCACCA
TCTCGAACTGGTCGTACACGGACCCGAACTTCGGCACCGCCACCGAAACG
TACGAAACTTACGTCGGTCTGTTCGGGGAGACATCCTTGGCAAGCCTGAA
AAACATCCGCATGGCGGGGGTGTGTGTCCTCGAGGGATACGGTAGCAACG
CAGGCATGATCGGCGGGCAAATAAGCGATTCAACCATTTCCAACGTGGAA
TGCGACTTCGCACCCGGCTCTTCCGTGTCGCAGGGCACGGGATCCGGGAC
GTGGCTGACAACGGGAGGTGTCGTGGGCCTTTCGAGGGGGGGTAGCGCGT
ACGGCATCACCCTCCGCGGCGAGCTCGAGATGCACGACAACACCGGTTTC
ACGAGCCGTACCGCCGGAGGGGTGTTCGGACAAATGAACCAGACCACCGT
GACGTTGGTGAGGAACCTTGCGACTTTCCCGTCCGGAGTGAACGGAACCT
TCGTTGGCGGGGTTGTTGGTTACGTGTTCTTTTCTTCTTTCGAGAAGGGC
TTGAACGCCATGAAAGGGGACGTGTCTGGTACAAAGAACGTTGGCGGCGT
TGTTGGTTACGTCAGGCACAACAACGCGTCCCAGTCCGTACACACGCTCA
TCAACTCGATGCAAGGAAACGTTTCTGGGCCAGGAAGTTCTGCATATGTT
GGTGGGATCGTGGGTCTCTTGGACCACGAAAGCAACTTGTACCACACCTT
CCTGAACTACATGGCCGGGGACATTACATGCGAGCTGACCCTGACAAACA
GGTGTGGAGGGCTGGTGGGTAGATCCGAGAACGACCCGAACATCGCAACG
TCGATCAATGCCATGAAGGGGTACGTGGACAACACGGTCGTCGGGACGGT
GTCGTCCGCCGGGGTGGCGTCGTCCGCGTCGCTGGCCATCACCGTCGACG
CCAGCTTCGGGCTCACGTACCTCGTCGACGGCCACAGCACCACGAGCGCG
GTCACCGGACTCCCGACAGACCCGGACTACTACGACCTCCCGTTCGCGAG
CCTGGACGGCACGGACGGCAACGGGGTGGTGTACGCGTGGGCGTTTGTGT
ACGGAAACGATACGGCGCTGGACCTCGCTCCGAGGCCGTTGAGCATAAAG
GCTTCTTTCGGGGCCGTGGGGGGCGCGACGGCCTACCGGCTCACCGTGCA
GAAGGCGAGCGGCGACGACGACACGGTGAGGACCGTGCACACGGGCTTCA
CCGACCTCGTGAAAAACATCCACTCCCTCACACCGGAGACGGAGTACATC
GTCCGGCTCTACTCGACGACGGACGGCACACAGTACGATCTCCACCTGGA
GGACAGCGCCACCACGACGGCAAACTCGGTCGCGAACCACCAGATGTCGG
ACTTTAGGAACCAGAGCGGGGCGTACGATCTGTCCGAGTTCGACGCGGGA
GCGACGAGGTCGGTCTATGAGATTGCGAACGAACTCTTTGCGACGGGCGA
CGCCGTGGTCGTTTCGGTCGGTGGGCGAGCGATGACATCAAAGTTCGTCA
AGCGGGGAGAGACGGCCTCCATCGTGGGAGAGAGCGCGCTCCTTCTCCCG
TTCGAATCGACAGCGGGGACCTCTCAATCGGCTTCGCTTACGCTCTCGGA
CAACTCGTCCGTGACCCTCACCTTCGACGAGAACGTCGGCACAATTGGTT
TGGAGGGGGCGGAGTACTCCCCTGGGGACTTTGTCGTGGTAGACGGCCGC
AAGATGACGTTCGCGGAAGTTTGA
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