prot_P-littoralis_Contig830.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig830.3.1
Unique Nameprot_P-littoralis_Contig830.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length151
Homology
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BLAST of mRNA_P-littoralis_Contig830.3.1 vs. uniprot
Match: D7G8M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M0_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 6.040e-64
Identity = 112/142 (78.87%), Postives = 126/142 (88.73%), Query Frame = 0 
Query:   10 QPGSPREGDGAAAEFVYKTARRVLTVLERGQYFGESGVLTYFNGGNKASAAAPPMTEQFCLVARTGVEMLVLRRKHFNIIEIPMLEVLKANYAARLHWRARRKQEAHRGRAVLRAAKRALDRAAMKAGESEGDPDFQLRQKQ 151
            +P  PREGDG AAEFVYKTARRVLTVLE G+YFGESGVLTYFNGG+K+SAAAPP+TEQFCLVART VEMLVLRR+HFNII +PMLE++KAN+AARL WRA+RKQ+AHRGRAVLRAAKRAL +AA + G  E DP FQ  QKQ
Sbjct:  107 KPDIPREGDG-AAEFVYKTARRVLTVLESGEYFGESGVLTYFNGGSKSSAAAPPVTEQFCLVARTSVEMLVLRRQHFNIIAMPMLEIIKANHAARLQWRAQRKQDAHRGRAVLRAAKRALGQAAARVG-GEEDPIFQSCQKQ 246
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BLAST of mRNA_P-littoralis_Contig830.3.1 vs. uniprot
Match: A0A835Z9P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.130e-13
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 0 
Query:   22 AEFVYKTARRVLTVLERGQYFGESGVLTYFNGGN-------------------KASAAAPPMTEQFCLVARTGVEMLVLRRKHFNIIEIPMLEVLKANYAARLHWRARRKQEAHRGRAVLRA 124
            A    +  RRVL +LE G++ GESG+L   + G                           P+TE F +VART V+ LVLR +H+ II+   LE++++ +A R  WR  RK+EAHR R V+RA
Sbjct: 1090 AMHAVRGRRRVLAILEAGEHLGESGLLQAASVGGWGXXXXXXXXXXXXXXXXXXXXGKREPITESFSVVARTTVQALVLRARHYAIIDANTLELVRSAHAVRALWRRARKKEAHRARGVVRA 1211
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig830.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8M0_ECTSI6.040e-6478.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9P8_9STRA2.130e-1337.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 16..117
e-value: 2.4E-5
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..151
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 31..107
score: 7.906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig830contigP-littoralis_Contig830:17098..18845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig830.3.1mRNA_P-littoralis_Contig830.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig830 17096..18845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig830.3.1 ID=prot_P-littoralis_Contig830.3.1|Name=mRNA_P-littoralis_Contig830.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp
GVVGGKATAQPGSPREGDGAAAEFVYKTARRVLTVLERGQYFGESGVLTY
FNGGNKASAAAPPMTEQFCLVARTGVEMLVLRRKHFNIIEIPMLEVLKAN
YAARLHWRARRKQEAHRGRAVLRAAKRALDRAAMKAGESEGDPDFQLRQK
Q
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom