mRNA_P-littoralis_Contig83.130.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 181 bits (458), Expect = 6.260e-51 Identity = 83/113 (73.45%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 1 KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 339
+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSHRN
Sbjct: 566 EAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRN 678
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 150 bits (379), Expect = 2.360e-43 Identity = 74/111 (66.67%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 339
GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N R QD+VE+R+GHM LGSH N
Sbjct: 55 GYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCN 163
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.170e-31 Identity = 59/97 (60.82%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVEN 297
YI SADDSKLEE+MDIL F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ L D P ++N R+ Q +N
Sbjct: 445 SYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.350e-31 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTP 252
GYI S DDSKL+ELMDIL FF++WR +LE + TLGD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S L P
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKISPLNMFP 84
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 117 bits (292), Expect = 7.630e-30 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 339
G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++PR+ QD+ E+RF H+R LG+HRN
Sbjct: 83 GCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRN 198
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.490e-26 Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 1 KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 339
+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+ L R++ PR QD++E+RF H+R G G+H+N
Sbjct: 490 RKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDED------LVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKN 594
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 4.370e-22 Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFV 186
GYI SADDSKLEELMDILRFF++WR +LE + TLG WK +FIT++SWTDIRV ILG V
Sbjct: 42 GYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 4.180e-21 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 7 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVS 189
GYI SAD SKL ELMDILRFF++WR +LE + TLGD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKL-ELMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 3.950e-17 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 4 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYS 150
AGYI SADDSKLEELMDILRF +WR +LE ++TLGD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 2.010e-11 Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 13 ITSADDSKLEELMDILRFFEKWRCNLE----EKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRN 339
ITS D L+ L++IL +F+ W +L L D+ F+ + +W D+R++ILGFV+M RY+F DD + R +++ + D E RFGH+R G H+N
Sbjct: 511 ITSKDSPLLDRLLEILEWFDTWWQDLNLFGGSDLALDDL-----FLPDQTWDDLRLTILGFVAMTRYVFGDDD-WVTEGSRGRYKFMRDWNQASDTCEKRFGHIRANQGCHKN 617 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig83.130.1 >prot_P-littoralis_Contig83.130.1 ID=prot_P-littoralis_Contig83.130.1|Name=mRNA_P-littoralis_Contig83.130.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp KAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSback to top mRNA from alignment at P-littoralis_Contig83:547294..547781+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig83.130.1 ID=mRNA_P-littoralis_Contig83.130.1|Name=mRNA_P-littoralis_Contig83.130.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=488bp|location=Sequence derived from alignment at P-littoralis_Contig83:547294..547781+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig83:547294..547781+ >mRNA_P-littoralis_Contig83.130.1 ID=mRNA_P-littoralis_Contig83.130.1|Name=mRNA_P-littoralis_Contig83.130.1|organism=Pylaiella littoralis U1_48|type=CDS|length=339bp|location=Sequence derived from alignment at P-littoralis_Contig83:547294..547781+ (Pylaiella littoralis U1_48)back to top |