mRNA_P-littoralis_Contig829.31.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE) HSP 1 Score: 258 bits (659), Expect = 8.910e-79 Identity = 137/239 (57.32%), Postives = 157/239 (65.69%), Query Frame = 2
Query: 344 MLQCRSLVEVYSDM*FVYNLCFVYTMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPKGYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLSTLNSP 1057
ML+CR+L EVY+D+ FVY + F+Y M L +DDTPTS+ARRDVT+FFSPQDC+NFLRFTQ Q+MLMLDLL+IP FIRTDCGFVV GRE L + FP K F VF F G Q + + GFIDGTVRGIARPK QRL YNGHKRKHAMKFQGVITPDGLFVDLWGPV GTRH S++L QSGL++K+S LNSP
Sbjct: 1 MLRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSVLNSP 239
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI) HSP 1 Score: 238 bits (607), Expect = 2.970e-70 Identity = 137/240 (57.08%), Postives = 160/240 (66.67%), Query Frame = 2
Query: 362 LVEVYSDM*FVYNLCFVYTMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPK------GYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLST-LNSP 1057
+ E Y+DM YN+ F+YTMA L DD T VARRDVT+FFSPQDCINFLRFTQPQIMLMLDLL+IP FIRTDCGF V GRE L + FP K G + +E F+ + F L+ + L + L A ++ + L GFIDGTVRGIARP R QR +YNGHKRKHA+KFQGVITPDGLFVD+WGPV+GTRHDSYLL QSGL+QKL+T NSP
Sbjct: 1 MFEAYTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHF-LEFKWGWL-LSLDVERLKPRLVEFAEAIYNADCPL----THCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSP 234
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: D7G148_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G148_ECTSI) HSP 1 Score: 233 bits (595), Expect = 7.640e-70 Identity = 129/234 (55.13%), Postives = 149/234 (63.68%), Query Frame = 2
Query: 362 LVEVYSDM*FVYNLCFVYTMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPKGYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLST-LNSP 1057
+ E Y+D+ YN+ F++TMA L DD T VARRDVT+FFSPQDC+NFLR TQPQIMLMLDLL+IP FIRTDCGFVV GRE L + FP K F + F F G + + + GFIDGTVRGIARP R QR +YNGHKRKHA+KFQGVITPDGLFVD+WGPV+GTRHDSYLL QSGL+QKL+T NSP
Sbjct: 1 MFEAYTDIWMAYNMAFIHTMASLVADDVATRVARRDVTNFFSPQDCVNFLRCTQPQIMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICQTFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHFNSP 234
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE) HSP 1 Score: 226 bits (576), Expect = 6.230e-66 Identity = 124/214 (57.94%), Postives = 137/214 (64.02%), Query Frame = 2
Query: 419 MARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPKGYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLSTLNSP 1057
MARL +DDTPTS+AR D T+FFSPQDC+NFLRFTQ Q+MLMLDLL+IP FIRTDC FVV GRE L + FP K F F F G Q + + GFIDGTVRGIARPK QRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPV GTRHDS++L QSGL++KLS LNSP
Sbjct: 1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSP 214
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5L0K5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K5_9PHAE) HSP 1 Score: 220 bits (561), Expect = 3.910e-64 Identity = 128/260 (49.23%), Postives = 165/260 (63.46%), Query Frame = 2
Query: 302 RIRDRLARKRQSFLMLQCRSLVEVYSDM*FVYNLCFVYTMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPK------GYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLST-LNSP 1057
R RDR+ARK+++ L++Q + +Y+ M F ++ +YT+ RL IDD PT ARRD +FFSPQDC+ +RFT+ QI+LML+LL++P IRTDCGFVVGGRE L + FP + G + E F+ + F +D + L + L + A V+ L FIDGTVRGIARP R+QR FYNG+KRKHA+KFQGV+TPDGLFVDL+G VGTRHD YLL QS LL+KL T LNSP
Sbjct: 33 RARDRIARKKRALLLMQWQQSYSLYTSMWFASHVAVMYTLGRLAIDDIPTGAARRDEDNFFSPQDCVELMRFTRDQIVLMLELLMVPAIIRTDCGFVVGGREALCVLLYRLAFPCRLEDMRLVFGQSESCICETFNWMLHF-MDFKWGFL-LSLDVQRLVPKLRTFAEAVYNKGCPL----THCWAFIDGTVRGIARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVDLYGAEVGTRHDGYLLAQSALLEKLQTHLNSP 286
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE) HSP 1 Score: 221 bits (563), Expect = 7.060e-64 Identity = 124/228 (54.39%), Postives = 153/228 (67.11%), Query Frame = 2
Query: 383 M*FVYNLCFVY-TMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPKGYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLST-LNSP 1057
M F ++ +Y T+ L IDD PT ARRDV +FFSPQDC+ F+RFT+ QI+LML+LL++P IRT+CGFVVGGRE L + FP K FR E +LR FQLDA +G+ L+G A+ SLQ RLSP+TLLG R ARP R+QR FYNG+KRKHA+KFQGV+TPDGLFV+L+G VVGTRHD +LL QS LL+KL T +NSP
Sbjct: 1 MWFASHVAVIYITLGLLAIDDIPTGAARRDVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPYRLKDMRLVFRPERILYLRDFQLDATLHGFQVGVPPLAGRSTAGTKASYFCGGSLQQRLSPDTLLGL---HRRNCARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVELYGAVVGTRHDGHLLAQSALLEKLQTHMNSP 225
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5JV22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV22_9PHAE) HSP 1 Score: 216 bits (551), Expect = 1.210e-63 Identity = 116/209 (55.50%), Postives = 133/209 (63.64%), Query Frame = 2
Query: 359 SLVEVYSDM*FVYNLCFVYTMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRA-PVQDGFPVSPKGYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPV 982
++ +VY+D+ FVYN+ F+Y MARL +DDTPTS+ARRD T+FFSPQDC+NFLRFTQ Q+ML+LDLL+IP FIRTDCGFVV GRE L + FP K F F F G Q + + GFIDGTVRGIARPK QRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPV
Sbjct: 5 TVEQVYTDLWFVYNIAFIYAMARLELDDTPTSIARRDATAFFSPQDCVNFLRFTQSQVMLILDLLLIPAFIRTDCGFVVSGREALWVLQYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPV 213
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE) HSP 1 Score: 218 bits (556), Expect = 6.550e-62 Identity = 132/282 (46.81%), Postives = 172/282 (60.99%), Query Frame = 2
Query: 236 ASPDPVQVNRTEGSAHAFMSRLRIRDRLARKRQSFLMLQCRSLVEVYSDM*FVYNLCFVYTMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQD-GFPVSPK------GYAPGFRNE*FSHLRVFQLDAAFS*L*MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLST-LNSP 1057
ASP P R ++H LRIRDR+ARK+++ L +Q + +Y+ M F + +YT+ RL IDD PT ARR V +FFSPQDC+ F+RFT+ QI+LML+LL++P IRT+CGFVVGGRE L + FP K G + E F+ + F +D + L + L + A V+ L FIDGTVRGIARP R++R FYNG+KRKHA+KFQGV+TPDGLFVDL+ VGT HD YLL +S LL+KL T +NSP
Sbjct: 32 ASPAPTDFPR---ASHHVPPSLRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHF-MDFKWGFL-LSLDVQRLVPKLRTFAEAVYNKGCPL----THCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSP 304
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.790e-59 Identity = 130/267 (48.69%), Postives = 152/267 (56.93%), Query Frame = 2
Query: 344 MLQCRSLVEVYSDM*FVYNLCFVY-TMARLRIDDTPTSVARRDVTSFFSPQDCINFLRFTQPQIMLMLDLLVIPEFIRTDCGFVVGGREFLRAPVQDGFPVSPKGYAPGFRNE*FS------HLRVFQLDAAFS*L*MGLSALSGCGAYQ------------AAAAQVHRSSLQLRLSPNTLL----------GFIDGTVRGIARPKRDQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVVGTRHDSYLLEQSGLLQKLSTLNSP 1057
ML+CR+L EVY+D+ FVYN+ F+Y MARL +DDTPTS+ARRDVT+FFSPQDC++FLRF Q Q+ I TD FV A + +P A FS LR Q GLS C A+ + V R L L + GFIDGTVRGIARPK QR+FYNGHKRKHAMKFQGVITPDGLFVDLWGPV GTRHDS++L QSGL++KLS LNSP
Sbjct: 1 MLRCRNLFEVYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQV------------IYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFTQSQHPXV---FGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSP 252
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Match: A0A6H5JR44_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR44_9PHAE) HSP 1 Score: 189 bits (481), Expect = 8.290e-54 Identity = 90/156 (57.69%), Postives = 104/156 (66.67%), Query Frame = 1
Query: 898 QRTQTETCNEVPRSNHARRAVC*SVGTGCWYTSRQLLARAVRASAEVVDAEQPSDHPYYLYGDPAYSMRNHLLCPYNAAVDGPLTPEMVDLNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVALQYRVATLLSNWHSCLNGATKSCNTF 1365
Q Q E +E+PR N+ RR G W + ++ P+ HPY LYGDPAY + NHL+CP++A+ GPLTPEM D NKRMSHCRVTVEWGFKEMTGKWAFVNMKP QKFLLSPVA QYRV TLLSNWHSC+NG + F
Sbjct: 22 QWAQEEARHELPRGNYTRRVFVHLWGPVAWTRHGSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPPQKFLLSPVAKQYRVGTLLSNWHSCMNGGIEISQYF 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig829.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig829.31.1 >prot_P-littoralis_Contig829.31.1 ID=prot_P-littoralis_Contig829.31.1|Name=mRNA_P-littoralis_Contig829.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp MGLSALSGCGAYQAAAAQVHRSSLQLRLSPNTLLGFIDGTVRGIARPKRDback to top mRNA from alignment at P-littoralis_Contig829:116231..118790- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig829.31.1 ID=mRNA_P-littoralis_Contig829.31.1|Name=mRNA_P-littoralis_Contig829.31.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2560bp|location=Sequence derived from alignment at P-littoralis_Contig829:116231..118790- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig829:116231..118790- >mRNA_P-littoralis_Contig829.31.1 ID=mRNA_P-littoralis_Contig829.31.1|Name=mRNA_P-littoralis_Contig829.31.1|organism=Pylaiella littoralis U1_48|type=CDS|length=369bp|location=Sequence derived from alignment at P-littoralis_Contig829:116231..118790- (Pylaiella littoralis U1_48)back to top |