prot_P-littoralis_Contig829.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig829.1.1
Unique Nameprot_P-littoralis_Contig829.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length274
Homology
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BLAST of mRNA_P-littoralis_Contig829.1.1 vs. uniprot
Match: D8LK07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK07_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 9.150e-24
Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 0 
Query:  165 LDKVPGTEDAAFACKAALKDIGKDCTT--CVQPN-KVIKAGDILLSSAPLGTRLHYACARRKRKDYLRVVFDIQNKRHAENRAKNGDASSK----KTKVEETVGYACLAPDSDNEL 273
            +DK PGTE +AFA KA  +D+GKDC +  C  P+  V + GD LL +APLG  +HY CAR  RKD +R ++  Q++R A+ + K     SK    +++VE TV +A LAPDSD+EL
Sbjct:    1 MDKAPGTEVSAFASKALSRDVGKDCISPVCTAPDGPVFQEGDFLLGTAPLGQVVHYTCARANRKDLIRAIYKEQDERRAKYQKKQQGTQSKQAEKRSRVEATVSFAALAPDSDDEL 116
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig829.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK07_ECTSI9.150e-2447.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig829contigP-littoralis_Contig829:248..3172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig829.1.1mRNA_P-littoralis_Contig829.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig829 204..3257 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig829.1.1 ID=prot_P-littoralis_Contig829.1.1|Name=mRNA_P-littoralis_Contig829.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=274bp
MGRTIRAAAGASVGSSVGSSVGASAGGASRNALTAAAGSPATETTPTREP
STPEQPSPVTRDSFLARWSPVKEESKVKTPFSPSVFCNRPGCCQELWHLI
LPGTKQNGVTFACCSDELCAGGGSILAYQTDCVACNGKIPERTICLSLEI
GNRKYQNQHRRNCLLDKVPGTEDAAFACKAALKDIGKDCTTCVQPNKVIK
AGDILLSSAPLGTRLHYACARRKRKDYLRVVFDIQNKRHAENRAKNGDAS
SKKTKVEETVGYACLAPDSDNEL*
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