mRNA_P-littoralis_Contig82.59.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 1.890e-131 Identity = 229/318 (72.01%), Postives = 254/318 (79.87%), Query Frame = 2
Query: 356 VVTEEPLPRCHRREHDMVELSAVRDEVDEAVETDKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELDANKDSADADKRSTTNADRE-SSSLEEFKEAL 1306
VV E PLPR HR E+ E +A+ +EV +AVE D R + IVD+ACHDNVR WL SF+WIEDNP AGVVVFA LFC++TLLFVPGLLLTI AG+AFGRALGFGFG+L GSVAVL GA+VAC++AFYLGRYVLHEQAQSCAKRYRIL AVNTAIERNG+KVMILLRLSPLVPFSGFNFIAGLTKVSLRDYL G GIVPGTLAFVYIGASTAGTMNEQEAM +ADRT+C+IR+ TLIVG VAAVLAIVAVT+YARRALKQALVESELDAN D + + + D E SS EFKEA+
Sbjct: 24 VVKEGPLPRQHR-EYATAERAAMDEEVGQAVEKDNERVXXXXXXXXXXXXXXXXXSAIVDIACHDNVRTWLETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSATDVECGSSPGEFKEAV 340
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI) HSP 1 Score: 353 bits (906), Expect = 1.970e-113 Identity = 186/235 (79.15%), Postives = 207/235 (88.09%), Query Frame = 2
Query: 356 VVTEEPLPRCHRREHDMVELSAVRDEVDEAVETDKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQ 1060
VVTE PLPR HR E+ E +A+ +EV +AVE D R R+KRI++FV+VA+VV+ IVD+ACHDNVR WL SFDWIEDNP AGVVVFA LFC++TLLFVPGLLLTI AG+AFGRALGFGFG+L GSVAVL GA+VAC++AFYLGRYVLHEQAQSCAKRYRIL AVNTAIERNG+KVMILLRLSPLVPFSGFNFIAGLTKVSLRDYL G GIVPGTLAFVYIGASTAGTMNE+
Sbjct: 24 VVTEGPLPRQHR-EYATAERAAMDEEVGQAVEKDNERVNQRIKRIMMFVVVALVVSAIVDIACHDNVRTWLETSFDWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEE 257
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.760e-56 Identity = 106/217 (48.85%), Postives = 150/217 (69.12%), Query Frame = 2
Query: 566 LGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELD 1216
L + +W+EDNP G + FA ++ T+ F+PG LLT+ AGL FGRALG G GIL+GS+AVL+GA V ILAF LGR+VL EQAQ ++++L AVN AI+ G+K++ILLRLSP+VPFS FN++ G+T V RDY GC G +PGT+AFV+IG + +G + + ++LI IVGG+A V+A+V +++YA+RAL + L E ++
Sbjct: 74 LTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVE 290
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.190e-54 Identity = 117/259 (45.17%), Postives = 168/259 (64.86%), Query Frame = 2
Query: 500 VIVAVVVATIVD--VACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCL-----------IRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELDANKDSAD 1237
V+V +++ IVD V NV + L W+EDNP GV FA ++ T+ F+PG LLT+ AGL FGRALG G G+ LGS AV+ GA + I+AF LGRYVL + AQ +++I+ AV+ AIE G+K+ +LLRLSP+VPF+ FN+I GLT +SL+DY GC GI+PGT+A+V+IG+S +G + + + EE D T+ + LI +IVG +A V+A+ ++ YA++AL + L E EL+ N+D D
Sbjct: 32 VLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASG-IGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEENQDGKD 289
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.610e-46 Identity = 102/272 (37.50%), Postives = 164/272 (60.29%), Query Frame = 2
Query: 416 SAVRDEVDEAV---ETDKRRGRVRLKRIVV-FVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELDA 1219
S V DE A+ E + + + RL +I + ++V ++ IVD A ++R + + +WIEDNP GV F ++ VAT+LF PGL+LT+ AG F ALG G G++L + AV GA + AF +GRY+L + K+Y I AV+ A++ G+++MILLRLSPL+PF+ N+I G+T VS RD+ GI+PGTL +V++G S+AG++ + + + A +R++T+++G V +L + + YAR+ L+ + E +A
Sbjct: 6 SNVEDEESSAMHIAEQAREKRKARLIKIALGLLLVGFIIYVIVDFATSKHLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLG-SSAGSLTDSSSGGDNSA------VRILTIVLGSVFGILGVCVTSYYARKELQNVISRREAEA 270
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.720e-44 Identity = 93/233 (39.91%), Postives = 147/233 (63.09%), Query Frame = 2
Query: 500 VIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQAL 1198
++V ++ I+D+A N + DWIEDNP AGV F ++ +A++ F+PGL+LT+ AG F ALG G GI L +VAV GA +F +GRY+L + K+ I A++ A++ G+++MILLR+SPLVPF+ FN++AG+T +SLRDY G GI+PGTL ++ +G S+AG++ + + + +R+I++++G V AVL + A T YA++ L + L
Sbjct: 35 ILVGFIIYVIIDLATTKNTMRIVADFLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLG-SSAGSLVDSSSSGNDST------VRIISIVLGIVFAVLGVYATTYYAKKELNKIL 260
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV) HSP 1 Score: 167 bits (423), Expect = 1.300e-42 Identity = 100/256 (39.06%), Postives = 159/256 (62.11%), Query Frame = 2
Query: 452 TDKRRGRVRLKRIVV-FVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELD 1216
TDKR L +I+V V+V ++V IVD H V+ + WIE+NP G+ VF A++ VAT+LFVPG LLT+ +G F + G GFG+LL ++AV GA + ++AF LGRY+L + ++ K+Y + A++ A+E G+++MILLRLSP++PF+ N+I G+T VS + Y I+PGT+ FV++GAS AG++ + + ++ + T++VG V V+AI + YA++ L + L + + D
Sbjct: 38 TDKRA---LLNKIIVGLVLVGLIVFIIVDSVTHGFVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGAS-AGSLVDSGNGGDTP------VVTIATIVVGVVFGVIAIALTSRYAKKELNKILEQEKTD 283
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2JYW7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYW7_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.450e-42 Identity = 98/263 (37.26%), Postives = 159/263 (60.46%), Query Frame = 2
Query: 428 DEVDEAVETDKRRGRVRLKRIVV-FVIVAVVVATIVDVACHDN-VRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESE 1210
+EV +T K +K++++ +++A + IVD A D V + DW+EDNP GV F ++ VAT+LF+PG +LT+ AG F A G G G+LL S+AV GA + +F LGRY+L + + +Y++ GA++TA+ NG K+M LLRLSP++PF+ N+IAG+T VS RD I+PGT+ +V++G S+AG++++ E+ + D+T +I T++ G V +L I A + YA++ L + + +
Sbjct: 2 EEVTTKEQTPKSSKADLVKKLLIGSILLAFIAYVIVDSASGDGRVTSTVEDFLDWVEDNPAEGVFAFIGVYFVATVLFIPGTILTLGAGFVFSSAFGLGVGVLLASIAVFVGASSGALASFLLGRYLLRDWVMTLTSKYQLFGAIDTALTNNGFKIMSLLRLSPIIPFNALNYIAGVTSVSFRDNALALLFILPGTVMYVFLG-SSAGSLSDSESSGD---DQTTTII---TVVFGIVFGLLGIAATSYYAKKELNAVIAQQD 257
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK) HSP 1 Score: 164 bits (415), Expect = 1.030e-41 Identity = 88/218 (40.37%), Postives = 136/218 (62.39%), Query Frame = 2
Query: 584 WIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQC-----------LIRLITLIVGGVAAVLAIVAVTVYARRALKQALVE 1204
W+E++P GVV FA+++ + T+LF+PG +LT+ AGL FGRAL +AF LGRYVL + AQ ++ +L AV+ AIE G++++ILLRLSP++PFS FN++ GLT+V R Y+ GC G++PGT+A+V+IG S AG + + + ++E L+ ++ L+VG A VLA+V +TV +RRAL++ L++
Sbjct: 86 WVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLMK 303
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: B7GDD3_PHATC (Predicted protein n=3 Tax=Sar TaxID=2698737 RepID=B7GDD3_PHATC) HSP 1 Score: 160 bits (405), Expect = 2.310e-40 Identity = 78/208 (37.50%), Postives = 134/208 (64.42%), Query Frame = 2
Query: 455 DKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEE 1078
D RGR +K ++ +++ V I+D + VR + + DWIE+N G+ +F ++ AT+LF+PG +LT+ AG F + G G G+++G AV GA + +F++GRY+L +QA K+Y + A++ A++ NG+K+++LLRLSP+VPF+ N+I G+T VS+RDY+ I+PGT +V++GAS AG++++ + ++
Sbjct: 14 DSPRGRTTIKLVIGLLLLGFVAFVILDSLTNRYVRDGIDSFLDWIEENSVEGIFLFVLVYFAATILFIPGSILTLGAGFVFASSFGLGLGLVIGVFAVFLGASLGATASFFIGRYLLRDQATKLTKKYAVFEALDVALQENGLKILVLLRLSPIVPFNAINYICGVTAVSIRDYILALFAILPGTTLYVFLGAS-AGSLSDSASSGDD 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig82.59.2 >prot_P-littoralis_Contig82.59.2 ID=prot_P-littoralis_Contig82.59.2|Name=mRNA_P-littoralis_Contig82.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=348bp MSSWRTPLSHGQGSSPVVVTEEPLPRCHRREHDMVELSAVRDEVDEAVETback to top mRNA from alignment at P-littoralis_Contig82:324037..332732+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig82.59.2 ID=mRNA_P-littoralis_Contig82.59.2|Name=mRNA_P-littoralis_Contig82.59.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8696bp|location=Sequence derived from alignment at P-littoralis_Contig82:324037..332732+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig82:324037..332732+ >mRNA_P-littoralis_Contig82.59.2 ID=mRNA_P-littoralis_Contig82.59.2|Name=mRNA_P-littoralis_Contig82.59.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig82:324037..332732+ (Pylaiella littoralis U1_48)back to top |