mRNA_P-littoralis_Contig82.59.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig82.59.2
Unique NamemRNA_P-littoralis_Contig82.59.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE)

HSP 1 Score: 402 bits (1034), Expect = 1.890e-131
Identity = 229/318 (72.01%), Postives = 254/318 (79.87%), Query Frame = 2
Query:  356 VVTEEPLPRCHRREHDMVELSAVRDEVDEAVETDKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELDANKDSADADKRSTTNADRE-SSSLEEFKEAL 1306
            VV E PLPR HR E+   E +A+ +EV +AVE D  R                  + IVD+ACHDNVR WL  SF+WIEDNP AGVVVFA LFC++TLLFVPGLLLTI AG+AFGRALGFGFG+L GSVAVL GA+VAC++AFYLGRYVLHEQAQSCAKRYRIL AVNTAIERNG+KVMILLRLSPLVPFSGFNFIAGLTKVSLRDYL G  GIVPGTLAFVYIGASTAGTMNEQEAM   +ADRT+C+IR+ TLIVG VAAVLAIVAVT+YARRALKQALVESELDAN D  +  +   +  D E  SS  EFKEA+
Sbjct:   24 VVKEGPLPRQHR-EYATAERAAMDEEVGQAVEKDNERVXXXXXXXXXXXXXXXXXSAIVDIACHDNVRTWLETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSATDVECGSSPGEFKEAV 340          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.970e-113
Identity = 186/235 (79.15%), Postives = 207/235 (88.09%), Query Frame = 2
Query:  356 VVTEEPLPRCHRREHDMVELSAVRDEVDEAVETDKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQ 1060
            VVTE PLPR HR E+   E +A+ +EV +AVE D  R   R+KRI++FV+VA+VV+ IVD+ACHDNVR WL  SFDWIEDNP AGVVVFA LFC++TLLFVPGLLLTI AG+AFGRALGFGFG+L GSVAVL GA+VAC++AFYLGRYVLHEQAQSCAKRYRIL AVNTAIERNG+KVMILLRLSPLVPFSGFNFIAGLTKVSLRDYL G  GIVPGTLAFVYIGASTAGTMNE+
Sbjct:   24 VVTEGPLPRQHR-EYATAERAAMDEEVGQAVEKDNERVNQRIKRIMMFVVVALVVSAIVDIACHDNVRTWLETSFDWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEE 257          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.760e-56
Identity = 106/217 (48.85%), Postives = 150/217 (69.12%), Query Frame = 2
Query:  566 LGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELD 1216
            L +  +W+EDNP  G + FA ++   T+ F+PG LLT+ AGL FGRALG G GIL+GS+AVL+GA V  ILAF LGR+VL EQAQ    ++++L AVN AI+  G+K++ILLRLSP+VPFS FN++ G+T V  RDY  GC G +PGT+AFV+IG + +G + +               ++LI  IVGG+A V+A+V +++YA+RAL + L E  ++
Sbjct:   74 LTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVE 290          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.190e-54
Identity = 117/259 (45.17%), Postives = 168/259 (64.86%), Query Frame = 2
Query:  500 VIVAVVVATIVD--VACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCL-----------IRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELDANKDSAD 1237
            V+V +++  IVD  V    NV + L     W+EDNP  GV  FA ++   T+ F+PG LLT+ AGL FGRALG G G+ LGS AV+ GA +  I+AF LGRYVL + AQ    +++I+ AV+ AIE  G+K+ +LLRLSP+VPF+ FN+I GLT +SL+DY  GC GI+PGT+A+V+IG+S +G + + +   EE  D T+             + LI +IVG +A V+A+  ++ YA++AL + L E EL+ N+D  D
Sbjct:   32 VLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASG-IGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEENQDGKD 289          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.610e-46
Identity = 102/272 (37.50%), Postives = 164/272 (60.29%), Query Frame = 2
Query:  416 SAVRDEVDEAV---ETDKRRGRVRLKRIVV-FVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELDA 1219
            S V DE   A+   E  + + + RL +I +  ++V  ++  IVD A   ++R  + +  +WIEDNP  GV  F  ++ VAT+LF PGL+LT+ AG  F  ALG G G++L + AV  GA    + AF +GRY+L +      K+Y I  AV+ A++  G+++MILLRLSPL+PF+  N+I G+T VS RD+     GI+PGTL +V++G S+AG++ +  +  +  A      +R++T+++G V  +L +   + YAR+ L+  +   E +A
Sbjct:    6 SNVEDEESSAMHIAEQAREKRKARLIKIALGLLLVGFIIYVIVDFATSKHLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLG-SSAGSLTDSSSGGDNSA------VRILTIVLGSVFGILGVCVTSYYARKELQNVISRREAEA 270          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.720e-44
Identity = 93/233 (39.91%), Postives = 147/233 (63.09%), Query Frame = 2
Query:  500 VIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQAL 1198
            ++V  ++  I+D+A   N    +    DWIEDNP AGV  F  ++ +A++ F+PGL+LT+ AG  F  ALG G GI L +VAV  GA      +F +GRY+L +      K+  I  A++ A++  G+++MILLR+SPLVPF+ FN++AG+T +SLRDY  G  GI+PGTL ++ +G S+AG++ +  +   +        +R+I++++G V AVL + A T YA++ L + L
Sbjct:   35 ILVGFIIYVIIDLATTKNTMRIVADFLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLG-SSAGSLVDSSSSGNDST------VRIISIVLGIVFAVLGVYATTYYAKKELNKIL 260          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV)

HSP 1 Score: 167 bits (423), Expect = 1.300e-42
Identity = 100/256 (39.06%), Postives = 159/256 (62.11%), Query Frame = 2
Query:  452 TDKRRGRVRLKRIVV-FVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESELD 1216
            TDKR     L +I+V  V+V ++V  IVD   H  V+  +     WIE+NP  G+ VF A++ VAT+LFVPG LLT+ +G  F  + G GFG+LL ++AV  GA +  ++AF LGRY+L +  ++  K+Y +  A++ A+E  G+++MILLRLSP++PF+  N+I G+T VS + Y      I+PGT+ FV++GAS AG++ +     +        ++ + T++VG V  V+AI   + YA++ L + L + + D
Sbjct:   38 TDKRA---LLNKIIVGLVLVGLIVFIIVDSVTHGFVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGAS-AGSLVDSGNGGDTP------VVTIATIVVGVVFGVIAIALTSRYAKKELNKILEQEKTD 283          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S2JYW7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYW7_9STRA)

HSP 1 Score: 163 bits (413), Expect = 9.450e-42
Identity = 98/263 (37.26%), Postives = 159/263 (60.46%), Query Frame = 2
Query:  428 DEVDEAVETDKRRGRVRLKRIVV-FVIVAVVVATIVDVACHDN-VRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVESE 1210
            +EV    +T K      +K++++  +++A +   IVD A  D  V   +    DW+EDNP  GV  F  ++ VAT+LF+PG +LT+ AG  F  A G G G+LL S+AV  GA    + +F LGRY+L +   +   +Y++ GA++TA+  NG K+M LLRLSP++PF+  N+IAG+T VS RD       I+PGT+ +V++G S+AG++++ E+  +   D+T  +I   T++ G V  +L I A + YA++ L   + + +
Sbjct:    2 EEVTTKEQTPKSSKADLVKKLLIGSILLAFIAYVIVDSASGDGRVTSTVEDFLDWVEDNPAEGVFAFIGVYFVATVLFIPGTILTLGAGFVFSSAFGLGVGVLLASIAVFVGASSGALASFLLGRYLLRDWVMTLTSKYQLFGAIDTALTNNGFKIMSLLRLSPIIPFNALNYIAGVTSVSFRDNALALLFILPGTVMYVFLG-SSAGSLSDSESSGD---DQTTTII---TVVFGIVFGLLGIAATSYYAKKELNAVIAQQD 257          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK)

HSP 1 Score: 164 bits (415), Expect = 1.030e-41
Identity = 88/218 (40.37%), Postives = 136/218 (62.39%), Query Frame = 2
Query:  584 WIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEEDADRTQC-----------LIRLITLIVGGVAAVLAIVAVTVYARRALKQALVE 1204
            W+E++P  GVV FA+++ + T+LF+PG +LT+ AGL FGRAL                      +AF LGRYVL + AQ    ++ +L AV+ AIE  G++++ILLRLSP++PFS FN++ GLT+V  R Y+ GC G++PGT+A+V+IG S AG + + +  ++E                  L+ ++ L+VG  A VLA+V +TV +RRAL++ L++
Sbjct:   86 WVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLMK 303          
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Match: B7GDD3_PHATC (Predicted protein n=3 Tax=Sar TaxID=2698737 RepID=B7GDD3_PHATC)

HSP 1 Score: 160 bits (405), Expect = 2.310e-40
Identity = 78/208 (37.50%), Postives = 134/208 (64.42%), Query Frame = 2
Query:  455 DKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPNAGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLSGALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMNEQEAMAEE 1078
            D  RGR  +K ++  +++  V   I+D   +  VR  + +  DWIE+N   G+ +F  ++  AT+LF+PG +LT+ AG  F  + G G G+++G  AV  GA +    +F++GRY+L +QA    K+Y +  A++ A++ NG+K+++LLRLSP+VPF+  N+I G+T VS+RDY+     I+PGT  +V++GAS AG++++  +  ++
Sbjct:   14 DSPRGRTTIKLVIGLLLLGFVAFVILDSLTNRYVRDGIDSFLDWIEENSVEGIFLFVLVYFAATILFIPGSILTLGAGFVFASSFGLGLGLVIGVFAVFLGASLGATASFFIGRYLLRDQATKLTKKYAVFEALDVALQENGLKILVLLRLSPIVPFNAINYICGVTAVSIRDYILALFAILPGTTLYVFLGAS-AGSLSDSASSGDD 220          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.59.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JID7_9PHAE1.890e-13172.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9F3_ECTSI1.970e-11379.15Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectoc... [more]
D7FIK1_ECTSI2.760e-5648.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2Y1P9_9STRA1.190e-5445.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2MII1_9STRA3.610e-4637.50Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4W131_9STRA3.720e-4439.91Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2A6Q3_TRICV1.300e-4239.06Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2JYW7_9STRA9.450e-4237.26Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3YEX9_HETAK1.030e-4140.37Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B7GDD3_PHATC2.310e-4037.50Predicted protein n=3 Tax=Sar TaxID=2698737 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig82contigP-littoralis_Contig82:324037..332732 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G9F3
PFAMsSNARE_assoc
Model size2241
Max annot lvl2759|Eukaryota
KEGG rclassRC00046
KEGG koko:K00486
KEGG ReactionR01960
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Hectar predicted targeting categorysignal anchor
Exons6
Evalue8.87e-120
EggNOG OGsCOG0398@1|root,KOG3140@2759|Eukaryota
Ec32 ortholog descriptionPutative SNARE-associated Golgi protein
Ec32 orthologEc-28_000720.1
EC1.14.13.9
Descriptioncanonical Wnt signaling pathway involved in osteoblast differentiation
Cds size1044
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig82.59.2prot_P-littoralis_Contig82.59.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig82 324341..331839 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791675.5238843-UTR-P-littoralis_Contig82:324036..3243401680791675.5238843-UTR-P-littoralis_Contig82:324036..324340Pylaiella littoralis U1_48UTRP-littoralis_Contig82 324037..324340 +
1680791675.640375-UTR-P-littoralis_Contig82:331839..3327321680791675.640375-UTR-P-littoralis_Contig82:331839..332732Pylaiella littoralis U1_48UTRP-littoralis_Contig82 331840..332732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791675.5468128-CDS-P-littoralis_Contig82:324340..3246441680791675.5468128-CDS-P-littoralis_Contig82:324340..324644Pylaiella littoralis U1_48CDSP-littoralis_Contig82 324341..324644 +
1680791675.5587378-CDS-P-littoralis_Contig82:329319..3295061680791675.5587378-CDS-P-littoralis_Contig82:329319..329506Pylaiella littoralis U1_48CDSP-littoralis_Contig82 329320..329506 +
1680791675.5738428-CDS-P-littoralis_Contig82:330059..3302061680791675.5738428-CDS-P-littoralis_Contig82:330059..330206Pylaiella littoralis U1_48CDSP-littoralis_Contig82 330060..330206 +
1680791675.589697-CDS-P-littoralis_Contig82:330729..3308471680791675.589697-CDS-P-littoralis_Contig82:330729..330847Pylaiella littoralis U1_48CDSP-littoralis_Contig82 330730..330847 +
1680791675.606219-CDS-P-littoralis_Contig82:331160..3313011680791675.606219-CDS-P-littoralis_Contig82:331160..331301Pylaiella littoralis U1_48CDSP-littoralis_Contig82 331161..331301 +
1680791675.6208072-CDS-P-littoralis_Contig82:331692..3318391680791675.6208072-CDS-P-littoralis_Contig82:331692..331839Pylaiella littoralis U1_48CDSP-littoralis_Contig82 331693..331839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig82.59.2

>prot_P-littoralis_Contig82.59.2 ID=prot_P-littoralis_Contig82.59.2|Name=mRNA_P-littoralis_Contig82.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=348bp
MSSWRTPLSHGQGSSPVVVTEEPLPRCHRREHDMVELSAVRDEVDEAVET
DKRRGRVRLKRIVVFVIVAVVVATIVDVACHDNVRMWLGASFDWIEDNPN
AGVVVFAALFCVATLLFVPGLLLTIAAGLAFGRALGFGFGILLGSVAVLS
GALVACILAFYLGRYVLHEQAQSCAKRYRILGAVNTAIERNGIKVMILLR
LSPLVPFSGFNFIAGLTKVSLRDYLAGCAGIVPGTLAFVYIGASTAGTMN
EQEAMAEEDADRTQCLIRLITLIVGGVAAVLAIVAVTVYARRALKQALVE
SELDANKDSADADKRSTTNADRESSSLEEFKEALGGDSSTSDARERR*
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mRNA from alignment at P-littoralis_Contig82:324037..332732+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig82.59.2 ID=mRNA_P-littoralis_Contig82.59.2|Name=mRNA_P-littoralis_Contig82.59.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8696bp|location=Sequence derived from alignment at P-littoralis_Contig82:324037..332732+ (Pylaiella littoralis U1_48)
GAAGAGCAGAGAGCGGAGATTCAGAGCGGAGGGAGCCATCAGGCAATCAG GCAGTAGGCAAGAGCAAGGTGCTGGAGCAGCAGGTAGGACCCGACGTGAA AATAACACCCTCTCGAAACAAGCACGATCAGAAGGACAGACTGCGGAGAA AAGTGAACAAAAACATCAAAGGAAGGCACAAAGGCGACGCCGGTGGAGGG TTCCATTCAGCCGCGATTATCGGCAGGAGGAGCACCCCGACCTTGTGTCA CAGCAGGCATTCAGACCAGGACACAGGAGAAAGAGCCGAGGTGTGGGGAT CATCATGAGTTCCTGGCGGACACCTCTTAGCCACGGTCAAGGATCGTCAC CGGTGGTAGTGACGGAAGAACCACTGCCACGCTGCCACCGTCGTGAGCAT GACATGGTCGAGCTATCCGCGGTGCGCGATGAAGTCGACGAGGCGGTCGA GACGGACAAGAGGAGGGGGCGGGTGAGGTTGAAGAGGATAGTTGTGTTCG TCATCGTGGCTGTCGTGGTGGCCACCATAGTGGACGTTGCTTGCCACGAC AACGTAAGGATGTGGCTGGGGGCGTCGTTCGACTGGATTGAGGATAACCC AAACGCTGGTGAGTTCGGACAATCGGGGTGAAGTGAACGAAAGATTGGCC GAAATTTGATGTGTGCTGAGACGACATTTCGACATTACATTTGGACATTA GTTTCCGATGACCTCTGATATCGTTTCATTCATATGATTCTGCTGTACGA GCAGACAGCGTGCCCAAGTCAGCTGTAAATCTTGTTCGCACTCACCGCAT TCAACCTAACAGTTGACGAGGATAAGGGACGTTTGAACCCTTATCGCGAT AAGAAGCTGGAAGGCAAGAAAGAGAAGCACCGCAGAAGGTGGGTGGATGA AAAAAAAAAAACTCTCTTCATTCATTCTGCGAGACCCCGGCCTGTGCACC CACGTCATACCTGTACTACAGCATTTGAAGACTGGTGCCTAGAACAAATG GGACCAAAACACACACACACTCACACACACACGGCACTGCTGTGACTGCT GTAGTTCAGTGATGCACACCACGTTGGAAGGTGTATCTTCTTCGGTCTTT CTTGGGTATTCCCTTGTAGTCTCTTTCTGTTTTTTGGATCTTCCTAGGGC TCAGCACTTTTTGTGACCACGGGCTAGATTTTGGCGATGAGCTAATGTGA GAATCAACAACAACACACACACACTTACCGCAAAATGGCAAGGGCTCGGA CACGAAATCAACTTCCCGCCGCAAGAGTCCCGACCTGAGAGTCGAGCTCG GTAGAGGACACCATGGGGAGACGGTGCGTGTGTTGGCATGCTCAGATCTG CTGATGGGGAGGATATATCACATCGAGGGCTGCTGCAGCAGCCGAAACAC TCCGCAATCTGGACCGGAATCTAACGTTTGAGGCGGCTTTGCTCGCGGCC ATGGGCACCAACTCTGACCTGCGCTACATACACCCATAAACCCGCAGTAC AGGAGATGTGTGCGGCAATTTTTTTCGCCACTGCCTACCGTATTCACAAA GGAGGGCGCATCACGTGAAAAGATTAGTTGTGCATGACAATATCTATCCG TAGAATGATATACTGTCTAACTTGCGCGGCTGCTGAAAGGAAAGCGGGCT GTGAAAGGTTTGATATCGGGAGAGATGAGTACTCAACAGCCAAAGGCAAC CTTTTTTAAGCCTTGTGTCCTTTTTTTGCTGTGGTTGCTTATTTTTGTTG TATTACGACCATGACCGGATTCGTGGGGTTGGGTAAGGTCCACGATGGCC TGCCTCATTCCACTCTCACCTAGCCCTGACTGAACCTACCTCGACCATCA TCGCTTGGCATTCCTCGTCACATAGCAACGAGAGGGAAAATTAGCCCCGC CTACGGTAACGGGTTGTAAAAGTTATCACGCCACGGGACCTTACTGCTGT ATGACAGCGAGTAGAGGCCTTCCATGGTGGCGTATTGACGAAGTGGATAC ATTTTCTCGTGGGGCTACCGTGTCACGCACACCGAAGACGAGATAATTTC AGTATGCCTTCTTCTTCAAAGCATGCCAAGAAGAGAAGCAGAAGCAGATG GCATCCGCTCATCAACCCCCAATAAATAAGCAACCGCAGCGCTTTACATC ACAAGATGGGGGAGTTCTGGCAGACCGTGGTTCTGGCAGACCGTTTGCGA GAGCCACCTCCATCTTGCGATGTGAAGCGCTGGGCTGCTTATCTTTGGGA GGTTGATGAGCGGATGCCGTCTGCTTCTGCTTCCCCTTAGCATGCTTTGA AGAAGAAGAAGGCATAGTGACGCCCGCAGAGGTGTATCAGCGCCATGATT TGACGCCCGCGTGGACTTAACGCGAGATGGCATCGCACTTGGTATACCCT TCCCTCACGAGAGTTGTTGACTATCCCCTTTACTACACAGTTTTTACCCG GCAATGCGCTTGACAGCCTCTGCGAGCTGCGTCATGTCATCGCTTGACCT ACCCAGCAGCATGTGATGTGAAACATACTGCTGGGTCGAGCGATGGTATA AAGCTTCTCGCAGAGACTTGTCAAGCGTGTATCCGGGGTAGTGAAGAGGG TGATACCGCTGTAAATAACTCTGGTACGGGGAGGCTGTACCTGTACCTGC TGCCATGCCACCTCCCGTGAAAGACCGTATGATCTTCGCAACAGAGCGCC ACTTCGTCCACGACTACCTACCAGTGCGGCCCCACTCCTCCAGGCACCCA CTCGTCGGGGTTTGTGCACGCAGGTCGTGGCCTTTGCAGCCAAGGTTTGA CTTGAGCCAAGCCTTTTCAACGTGTCCCTCTTTCTCCTCGCCGCAAGACA CATTTACACAGAACTCCGGTTTGATGCTTCTGCCCCCCGCCCCTTTTGTC GTGCGTGGAATCATACGATGTCAGATACACGCAGCGCTTATTGAGCTTCA ACGTTTCCAGAGCAGCGCCATGAGGATTCCTCCACCACGCTCTCCATGTT GTCGCGTGTGCCCCCACCCCTACTCCCTGCCGGCAGTCAGCTCCTTTCGT CTGCGTTGGGATTGAGTCTCGTTGGTGCGTGGATTTCCCTCCTCTCTGCG ATGTGCTGTGCGCGTTTACTGAACTTACGGGGCGAGCGAGCGGTCGGTAT CCCGGGTTTACTTGTATTGTATACTCCAAGTTTAAATATATACTTCGTAT ATATTATGATGTAAACGGCAAATATGTCGTTTACCGGGCATTTTGATAAA ACAAGCGTTCGGCGCGGAGAGGAATCAAGGCATACTTCAACCATCTTATT CCCAGGTAGCCAAATGTCGCCATTTTGGGTCGCTATTTCATTATTCGTCA CTTGGAATATCACGTGACTCCCAATAATAGCTAAACGTTTACCTCGCTGG CCGCTCAATTTCAAAACGCACTTTATAAGCAAGTGAACGCGTCGCCAAAA AAATGGCGACGCGCTCACTTCCTTTTATAGAGCTTGTCTTAAAAAAACAT GATTTTTCACAGGCGGGTGAAACGGTCAAGGTGACCTATACCGACGCTCC TCGGCTTCCTTTTCACGTTTGACGAACCCCAAGTACTACTGCAGTGCGCG CAGCTGGATCTCGCCGGACTACACTGTACAGCAGCACTTCGAAGCCAGGG CTATGTAACGTGTGGCCCTTTTGGTGGCCTTCCCCAGAACGCTGACACAT CTGGCAACAGTAGTGGCCCTGTAGACGTCTCCTTGTGGGAAACACTGACT GTCTGCAAAACACGACAGCTTCAAAATCAGACCTGAAGGAACCTTCGAGG TCTCGCGCGTGTGCCACCTCCGAACATCAAGCGCAACGGCCAAACCGGCA TTCGTGCCATCAGGGCAATATAGACAGCAAGAGAGACAGCAACCAAGACA GCAACTAAGACAGCAACAACGACCAAATATGACAAGCGCAACAGCAACCG GTATTCGTGCCATCAGGGCAACAAATACAGCAATAAAGACGACAAGGACG AGCGCTCGTAAGGACAAGCGCAACGGCCAAGCATGACAAGCGCAACAGCA ACCGGCATTCGTGCCATGAGGGCAATAAATACAGCAATGAAGACAGCAAT GAAGGCCGCAATGAAGACAGCAATGCCGAGCGCTTTTAAGGACGAGCGCA ACCGCCAAACATGAACAGCACAACGGCCAGACCGGCCGTCTTCCTATCAG GGCAATTGTGAAACATGACCGACATGAAACGAGGCCTACTACATCGCTTG AGGCAAGATTCAGTGCGGTTTGTAGCACCACGTAGTTCTCGCGACGACAG CGTGCGTGTGTGTTGTTTTTGTCCTCGCCTTAAAAACCGTTCCGATCTCT GCTCAGTACCTTCTAATGCCCGTACTCCTCCGACCATGGACGATTTCCGC GGTCACGGGCTGCCTACCCAAAAGGAGTACGAAGTATGTAATACGCGGGA GGTCCCATGGACCCAATAAAAGTATACATACGACGAGGGAACTCCGGCAA ATATAAAAACGGACCCCGAAAGATCATACAACGCTACAAAAAATAGAACA AAGAGAGAGAGCATACATAGGGCAGAGCAAATCGAAAAATACAAAAATAC ATGAAAATGACACTGACATTCGAACTCAGGTGCCAGGTGCCGAGGAAAAC GGATACCGGAGTTGCTACTTTCTCCACCGACCCTGCAAACAGCAGCCACA ATCAATCCACCTCCAAAACATGAAGACCTATGGTACCATAATTCAACCAA GATTGTTGTAAGACCCCCGTCGCAAATCTGTTCGTTGCATCTGTCGCTAT TTTCCTCCCCGATGGCCTCTCTATCTCTCTATGCAGTACCACCACATTCC GCACTGATCCGACGAGTCACGGGCGCCTTACGGGGGTTCGGCATGCAGCA CGACTGCGGTGCCCTACATATGTGTGTGCGTGTGTTGTGTGTGTACACCT CTGACGCGTGGGAAATTGTAGCCACTGATCAGTGCGCACGTGGCACGTCA CGCAGGAAAAACAACAATGTCTGTGCTGACACACGTGTCGGACTGCCTTC CTTTTGATGAAAAGTGACTGCTGTACCATTGGTACATGCGTTTTCCGGCA CGCACATTGGAATTTTCCATCCCGTCTGTCTCGCCGAGTGCAGAAATTGA TTGTGTCAAGTCCTCGTCGGACACACGTAAGTAAGTTTAGCCTTTTTTTC CTCCCGTTTTGATACCATTATATTGACTATTGACCGCATCAGTATTGGTT TCCACTTACCCTCTTAACTCGTCGCTCGCGCAGGGGTGGTCGTATTCGCC GCGCTTTTTTGTGTGGCAACCCTGCTGTTTGTCCCGGGGCTGCTGCTGAC GATTGCAGCTGGGCTTGCCTTCGGGAGGGCCCTGGGCTTTGGTTTTGGGA TTCTGTTGGGCTCAGTGGCAGTCCTATCAGGAGCGTTAGTCGCGTGCATC TTGGCCTTTTACCTTGGTCGGTGAGTGGTCGGTGTTGTAGTACACAGAAA TGAATCATGTCCCTGATGGGGTACCCCAGAATGGAGGTGGAGAGGGTGTG GGGGGGAGTGAGGATAAATTCTTTTGCTGGCATGGCCCCGGCTGTACCAG AGTGGCGGAAGGAGAGGAACCATATAGAATAGCCTGGAGAGAGCAGGTTA GATGTGAAAAAAAAAATTACCGCAATCCGCGCTCGGACTACCGGGGTCAT TCTACAAGAGGTTTGTGGTTTCTATGTACGGCAGGCTAGTACCAAATACC AGCAACTCTCTTTGACGACCACCGGTGCCGTCTTGTATTGTTGTCGTTTT TTGCATGCTGCTGTGCCTTCGTGATTTGTTTTCTTGGTAGAAGACGTTGC CTTTTGAAAGATCATGTGACGCTGGTACACCACGTGATGGCGCCTTCTCG ACACTACAGCAGTAGTACCCAAGCCTTAAAAGTAGGCACGCACGCCAGCA CTATCGTAACGTTCGTTGCCCGCTGTCATTGTGGAACTATTTTTTTTGTT GTCCTGTGATTTGAATGTTCCAGGTACGTGTTGCACGAGCAGGCGCAGAG CTGCGCCAAGCGCTACCGTATCTTGGGTGCCGTGAACACCGCGATCGAGA GGAATGGCATCAAGGTCATGATTCTTCTTCGACTCAGCCCGCTTGTGCCC TTCAGCGGCTTCAACTTCATGTGAGAACAGATATGTTCCCGACAGTCTCT TGGTTTGTTGTGTTTCCCGGTTTCAAACTTGACCGAGTGGAAGGACCGTT GATGTTGGGGGAATCTATTTTGGTTTTCGCCGTGTTCGTTGTTGTTTTTA TTTACTTCGTATTGTTAGTTCGTGACCACGGAGGTTGTCTCTCGCGTTCT GAACCTGTTTGAAAAATGGCCGGAAGTAGTGTAAACGGGAGTCCATGTCA TCATTCTGGCCTTATGTTACACTCAAGCCACTAACGGAAACACTGCGCAG GCCTTCTTGTGCGAAAGCCTCCGTACACGAAATGCTCCTCGCACGACACA TATCCTTCATACATAAACGCCTCCGTACATGATGACCTCCTCCCTTGATG ATGGGTCACTTTGTCTCCCCCACACGTGAACGTTTGATCCTCACGCGAAG GGTTTGTCGCCCGAATGCCTCCTTCCCTCTTTCACCTCCTCATACTTGAA CGCCCCCCTTCGTCTATGCCGCCGTCTTGACAAACCTTTGCAGCGCCGGG CTGACGAAGGTCTCTCTTCGAGATTACCTTGCCGGTTGTGCCGGTATCGT TCCGGGAACCTTGGCCTTCGTTTACATCGGAGCTAGCACTGCAGGAACGA TGAACGAACAGGCAATGAGATAATGCGACGGGTGGCCAATCGGGGGCCCC AAGGGTGCAAGATGATGCCGGGCCTGGTTTGATCCATTGTATTTCACCGA GCCGCTTGATAGATCCGTCGTGGCCGTTCAGGCCGCTGCCGTTTGTCTCA AGGGAAGGGCCGAACAGTTGTGTCTGTTTTTACTTCTTCGCCGTGAAGAA TGGAGGTTAGAAAAAGTTGCGTCGTGGAGACAATCGGAAAGAGCGTGGAG ACAATCGTCGTCTCTTTCCATAATGTTACACCACACTACACCACTACTGC TGCTGCTGTGTGTGGACAACGCAGGAGGCGATGGCCGAGGAAGACGCGGA TAGAACGCAGTGTCTAATCAGGCTCATCACGCTCATCGTCGGCGGCGTTG CGGCCGTCCTGGCCATCGTAGCTGTTACGGTTTACGCCAGGAGAGCTCTC AAGCAGGCCCTAGTGGTGCGTGCGTCTGTTTGTGCTTGTGGTGGAACCTT TGCGTGGTTGCAGAGTAACTTATGTTGGTCACGTTTTCGATTTATCTGAT GACTTGGGTACTGCAGCGGTTGGAAAATAACAACTCAAGTTGTATTTGCG TGCGGCCCGCGCTTAATTTGGGTGTGTAGGAAGGGTGAAACTGAACGGCA GCAGCACCGTTTTTGCCCCAAGGATTTCATCTCCCTCGACTCGCGCGTGC CAGGGGTGAAACCGGCCCCGTAGATATACGTTTTTTTTCATGAGGTTCCC CGCTCACCGCAAATCAACACACCTTCGAGTGTGGATTATTCCTGATCGTG AAACCGTTTTTGTGCAAATGTTGTGTGTGTGTGTGTGTGTGTGGCGTCCT GCGCAGGAGTCGGAACTGGATGCAAACAAAGACAGCGCAGACGCCGACAA GAGGAGCACCACCAACGCGGACCGGGAATCGAGCAGCTTAGAAGAGTTCA AGGAGGCGTTAGGAGGAGACAGCAGTACCTCTGACGCCCGGGAGAGAAGA TGACTCACGTGATCCAACGGGTGCCCGCATCCCGCTGGTCTTTTTCGGTC GTCTCTTGCTCTCGATCATCAAAGTGAAACATTTTTTTTAACTGCTGCGG GTTCAGGTCAGCAAGTTTTAGAAATATTTAGTACGGACACGACATGTGTT GCGTGTGCAGGCACATTGCAAGGATGGCTTCGATGGCCTGAAAATTAGCA ATTTTGTTTTATTTTTTTTCATTTTGTTGTGCTTTTGATTTTGCGATTTG TTTTGGTGGCGTTGTCAGATGGGCAAGGCGCGCGTGGTGAAATTTGAAGT GGAAGCCGATTTTTTCTGAACTTGGCGGGTACAGCTACTATACATCGATT TTTCGTCTTTTTTTATCGCATTTCTGGCATCGAGGCTTTTCCTCTGGCCT GTTACTGTTCTTGTATATACGAGTACGGCGCATTTATTTCATGTCAATTT TTTCATTATGTCATACTTAAATATTTTTTTCTGCAACAGTAGTTTGGAGT AGAAAGAATACCTGTACAGCAGTAACCTGAACGTCGTTCTGACCGTGGGC GTGAGTCAAAACTCTTTTGCGCAGCGGTGTTCGTGCACGCCATATTTTGT TCTTTGTATCTTGGTCTTCCTTCTCGTGGTCACTTGTTTTATACCGTATT CTCCGTGACTAGTTGTACGTATTGTTGATCAGCCCAAGTTTTTGAGCGCG CGACAAACTTTGCACCTCGCAGCGTTTTTGGCTCCCGTTGACCGCATGAT GTCACGTCCGGAGACGTGTAGATTCGACTTCCGGGCAGTAGTGAGCCAGT TGTAATGGGATTAGTGTTCACTGGGGCTGTGGTCGACCTCTTTCGCAATC GTTGGTCGACGATGTTTTTTCTTTGGTCAGGCGTTTCCCGGGGAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig82:324037..332732+

>mRNA_P-littoralis_Contig82.59.2 ID=mRNA_P-littoralis_Contig82.59.2|Name=mRNA_P-littoralis_Contig82.59.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig82:324037..332732+ (Pylaiella littoralis U1_48)
ATGAGTTCCTGGCGGACACCTCTTAGCCACGGTCAAGGATCGTCACCGGT
GGTAGTGACGGAAGAACCACTGCCACGCTGCCACCGTCGTGAGCATGACA
TGGTCGAGCTATCCGCGGTGCGCGATGAAGTCGACGAGGCGGTCGAGACG
GACAAGAGGAGGGGGCGGGTGAGGTTGAAGAGGATAGTTGTGTTCGTCAT
CGTGGCTGTCGTGGTGGCCACCATAGTGGACGTTGCTTGCCACGACAACG
TAAGGATGTGGCTGGGGGCGTCGTTCGACTGGATTGAGGATAACCCAAAC
GCTGGGGTGGTCGTATTCGCCGCGCTTTTTTGTGTGGCAACCCTGCTGTT
TGTCCCGGGGCTGCTGCTGACGATTGCAGCTGGGCTTGCCTTCGGGAGGG
CCCTGGGCTTTGGTTTTGGGATTCTGTTGGGCTCAGTGGCAGTCCTATCA
GGAGCGTTAGTCGCGTGCATCTTGGCCTTTTACCTTGGTCGGTACGTGTT
GCACGAGCAGGCGCAGAGCTGCGCCAAGCGCTACCGTATCTTGGGTGCCG
TGAACACCGCGATCGAGAGGAATGGCATCAAGGTCATGATTCTTCTTCGA
CTCAGCCCGCTTGTGCCCTTCAGCGGCTTCAACTTCATCGCCGGGCTGAC
GAAGGTCTCTCTTCGAGATTACCTTGCCGGTTGTGCCGGTATCGTTCCGG
GAACCTTGGCCTTCGTTTACATCGGAGCTAGCACTGCAGGAACGATGAAC
GAACAGGAGGCGATGGCCGAGGAAGACGCGGATAGAACGCAGTGTCTAAT
CAGGCTCATCACGCTCATCGTCGGCGGCGTTGCGGCCGTCCTGGCCATCG
TAGCTGTTACGGTTTACGCCAGGAGAGCTCTCAAGCAGGCCCTAGTGGAG
TCGGAACTGGATGCAAACAAAGACAGCGCAGACGCCGACAAGAGGAGCAC
CACCAACGCGGACCGGGAATCGAGCAGCTTAGAAGAGTTCAAGGAGGCGT
TAGGAGGAGACAGCAGTACCTCTGACGCCCGGGAGAGAAGATGA
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