mRNA_P-littoralis_Contig819.25.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 7.590e-137 Identity = 194/285 (68.07%), Postives = 218/285 (76.49%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKL---YDVRAMVVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMD--VGAGGDTSFHTLREELVDHFTYKKKRGDIVWFRSAAK*TK 840
W W+RLPEG+ L++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI DGGYHRV L + V A V EQQ WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNMLL FDGL LE DM+W GKDGEAD TTG FPA T S + V D +FH R+ LVDHF + K ++ WFR+ T+
Sbjct: 254 WRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQ-WSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRAVGADTR 537
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 4.740e-136 Identity = 189/267 (70.79%), Postives = 210/267 (78.65%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKL---YDVRAMVVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMD--VGAGGDTSFHTLREELVDHFTY 786
W W+RLPEG+DL++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y G + HTGGWLI +GGYHRV L + V A V EQQ WSKR ESVRKDIEC FGRLKGRFRLFKTGILF R KID+AWFTACIIHNMLL FDGL LE DM+W GKDGEAD TTG FPA T S + V D +FH R+ LVDHF +
Sbjct: 22 WRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQ-WSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAF 287
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 387 bits (993), Expect = 1.090e-130 Identity = 183/270 (67.78%), Postives = 215/270 (79.63%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLY-DVRAMVVE-QQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTV---GSMDVGAGGDT-SFHTLREELVDHFTYKK 792
WHQWV LPEG+ LK+V Y +G PGAV S DCTH++W C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRV L + E QQEWSKRFES+RKDIEC FGRLKGRFRLFKTGILF +REKIDNAWFTACIIHNML QFDGLANLEKD++W GKDGEAD+TTG FP T V +V G +T +F R++LV+H YKK
Sbjct: 156 WHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGEEVDDGDNTEAFKLFRQQLVNHVAYKK 425
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE) HSP 1 Score: 286 bits (731), Expect = 1.390e-93 Identity = 141/204 (69.12%), Postives = 154/204 (75.49%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKL---YDVRAMVVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNML 603
W W+RLPEG+DL++VES Y LG+PGAVGS DCTHV WERCA+SET HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV YKYE+Y G + HTGGWLI DGGYHRV L + V A V EQQ WSKR ESVRKD+EC FGRLKGRFRLFKTGILF R KID+A FTACIIH ML
Sbjct: 49 WRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQ-WSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE) HSP 1 Score: 271 bits (692), Expect = 1.490e-87 Identity = 119/220 (54.09%), Postives = 158/220 (71.82%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLYDV--RAMVVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTG 654
W WV+LP GD+LK+VE ++ + G+PGA+ S DCTH W SE ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY DG+ + + G WL+VDGGY ++ L VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK GIL+ +R+ IDN WFTACI+HNML +D L + + W G
Sbjct: 22 WDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQG 241
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE) HSP 1 Score: 261 bits (668), Expect = 3.270e-81 Identity = 134/271 (49.45%), Postives = 167/271 (61.62%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLYDVRAM--VVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMDVGAGGDTSFHTLREELVDHFTYKKKRGDI 807
W WV+LP GD+LK+VE IY + G+PGA GS DCTH W C +SE N H GKEGYTS+V E CDH+GRIIA+TK PGAENDKTV+ RD S+ RI+ EEPW SY +T W+IVDGGY ++ L VE+ +WS+R ES+RKDIEC FGR+KGR+RLF ILF++R+K DNA FTACI+HNML F+ L +E+D +W G G E A +MDV +T E H + R DI
Sbjct: 98 WDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGE------AAAVAAAMDVDEESETPTPDFEEX---HKRLESMRKDI 346
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 238 bits (608), Expect = 7.880e-73 Identity = 120/280 (42.86%), Postives = 175/280 (62.50%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLYDVRAMVVEQQE--WSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDG---EADETTGPFPAQTTVGSMD---VGAGGDTSFHTLREELVDHFTYKK-KRGDIVW 813
+ ++V LP G+DL++V Y+++GFPGAVGS D TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG G +L+VD GYH+ L +++ + +SKR ES RKD+EC+FG LKGRFR+ K I F+ +E IDN +FT CI+HNML FD ++ ++ NW G G AD P ++VGSMD +T F LR +LV +F Y++ K+ DIVW
Sbjct: 127 YDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRD--PNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVW 404
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 238 bits (608), Expect = 8.590e-72 Identity = 120/280 (42.86%), Postives = 175/280 (62.50%), Query Frame = 1
Query: 1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLYDVRAMVVEQQE--WSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDG---EADETTGPFPAQTTVGSMD---VGAGGDTSFHTLREELVDHFTYKK-KRGDIVW 813
+ ++V LP G+DL++V Y+++GFPGAVGS D TH+ W C Y++ I+ GKEG +V F+ DH+GR++A T+G+ GA NDKT+++ D +V RI+ + + KY+LY DG G +L+VD GYH+ L +++ + +SKR ES RKD+EC+FG LKGRFR+ K I F+ +E IDN +FT CI+HNML FD ++ ++ NW G G AD P ++VGSMD +T F LR +LV +F Y++ K+ DIVW
Sbjct: 218 YDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRD--PNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVW 495
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5JU81_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU81_9PHAE) HSP 1 Score: 224 bits (571), Expect = 1.670e-68 Identity = 122/260 (46.92%), Postives = 161/260 (61.92%), Query Frame = 1
Query: 73 FPGAVGSADCTHVAWERCAY---SETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLYDVRAM--VVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVG-SMDVGAGGD---TSFHTLREELVDHFTYKKKRGDIVWFRSA 825
+PGA D T +A ++ + E GKEGYTS+V E CDH+GRIIA+TK YPGAENDKTV+ R + RI+ EEPW SYK++LY DGT + TG W+IVDGGY ++ L VE+ WS+R ES+RKDIEC FGR+KG +RLF ILF++R K+DNAWFTACI+HNML F+ L +E+D +W G E T VG +MDV + + F R +L+ HF ++ +I+WF A
Sbjct: 56 YPGAEN--DKTVIARDKFIWRIRDEEPWKXGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKTVIARGKFIWRIRDEEPWKSYKFKLYNADGTETECTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHGWSRRLESMRKDIECCFGRVKGLWRLFGGDILFSTRPKVDNAWFTACILHNMLHSFNRLDEMEEDADWMGSAARLREAT-------AVGVAMDVDEESEPPTSGFEEFRRKLIAHFACAWEKKEILWFTRA 306
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 224 bits (572), Expect = 6.560e-67 Identity = 114/274 (41.61%), Postives = 162/274 (59.12%), Query Frame = 1
Query: 10 WVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVSKLYD-VRAMVVEQQEWSKR-FESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTG-PFPAQTTVGSMDVGAGGDTSFHTLREELVDHFTYKKKRGDIVWFRS 822
WVR+P D+LK + Y+++G GA+GS D TH+ W C YS+ + H GKEGY ++VF H R+++ T+G+PGA+NDKT++K D +++ + +Y L G DG G WLIVDGGYH +L +RA + + KR ESVRKD EC FG +KGRFR+ K L+ +E+IDN +FT I+HNMLL +DG+ LE D +W G DG+ D+ P + D D F LR++LV +F Y+ +G + W RS
Sbjct: 181 WVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig819.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig819.25.1 >prot_P-littoralis_Contig819.25.1 ID=prot_P-littoralis_Contig819.25.1|Name=mRNA_P-littoralis_Contig819.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=136bp MVVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFback to top mRNA from alignment at P-littoralis_Contig819:107574..109296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig819.25.1 ID=mRNA_P-littoralis_Contig819.25.1|Name=mRNA_P-littoralis_Contig819.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1723bp|location=Sequence derived from alignment at P-littoralis_Contig819:107574..109296+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig819:107574..109296+ >mRNA_P-littoralis_Contig819.25.1 ID=mRNA_P-littoralis_Contig819.25.1|Name=mRNA_P-littoralis_Contig819.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=408bp|location=Sequence derived from alignment at P-littoralis_Contig819:107574..109296+ (Pylaiella littoralis U1_48)back to top |