mRNA_P-littoralis_Contig816.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A6H5JAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 4.900e-22 Identity = 64/155 (41.29%), Postives = 87/155 (56.13%), Query Frame = 3
Query: 45 TGADGKLLEELFHKYTGNMRGVIRALEAGASVNGHYALPYAPLMVAANRADEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAVFLEKDRPGAFAVVQELLKAGADPGLVAKDG 509
T D +LL E+ GN RGV L+ GAS++G + PL AA +V L + GA+LE DV + G + SGS AVH+AV+ +VD+L+ALL GA+PNAAD+ G TPLM + VV+ELL+ GADP + +G
Sbjct: 3 TSLDKQLLVEVLK---GNERGVEEQLDLGASLDGFDI--WKPLFAAARHGRAGVVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAADATGHTPLMQACRLFGAADRYVVVRELLRGGADPARQSDNG 152
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: D8LME9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME9_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 4.190e-12 Identity = 43/92 (46.74%), Postives = 52/92 (56.52%), Query Frame = 3
Query: 174 MVAANRADEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAVFLE--KDRPG 443
MVAA V+FLV GA L+ T DV G + GS+A+H+AVHG L LL++GANPNAAD G TPLM + KDR G
Sbjct: 1 MVAAGLGKVSFVEFLVARGAGLDSRTCRDVPRPEGGIILRMGSQAIHAAVHGGSPGVLYVLLRLGANPNAADDDGETPLMIACGDSTKDRFG 92
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A7S3FZE7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZE7_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 4.430e-7 Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 3
Query: 120 LEAGASVNGHYALP----YAPLMVAANRADEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLM-AVFLEKDRPGA----FAVVQELLKAGADPGLV 497
+E G++VN LP PLM+A+ + V L+E GA + +R KSG+ A+H AV G + LK+L++ GA+ NA D+ G TPL+ L+ P F V+ LL GAD V
Sbjct: 187 IELGSNVNAVVVLPSGDGLTPLMLASAKGSALAVDLLLEGGASVS------------KRKNKSGATALHIAVKGFHLQILKSLIRAGADVNATDAEGTTPLIECAKLKPSSPAQARARFLVLSFLLGEGADANKV 309
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A2H3IFF3_9EURO (Uncharacterized protein n=2 Tax=Eurotiales TaxID=5042 RepID=A0A2H3IFF3_9EURO) HSP 1 Score: 58.2 bits (139), Expect = 9.250e-7 Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 3
Query: 144 GHYALPYAPLMVAANRADE--KMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPL-MAVFLEKDRPGAFAVVQELLKAGADP 488
G AL +A A+ R+D +MV+ L++ GA T + G+ +H AV G V ++ALL+ GANPNA + G TPL AV + PG +V+ LLK GADP
Sbjct: 666 GRTALHFA----ASKRSDSGPRMVQILLDGGAKATAKTR------------QGGNTPLHYAVEGRSVATIQALLEAGANPNATNGSGVTPLHKAVAI----PGLEEIVEVLLKGGADP 763
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 1.710e-6 Identity = 43/126 (34.13%), Postives = 61/126 (48.41%), Query Frame = 3
Query: 120 LEAGASVNGHYALPYAPLMVAANRADEKMVKFLVESGADLEIATLCD---VTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAVFLEKDRPGA-FAVVQELLKAGAD 485
LE GASV+ P+ VA + ++K LV +GAD E D G ++++G A++ A L LL++GANPNA DS G TP+M +++ LLKAGAD
Sbjct: 2 LEEGASVHDFGDAVVRPIAVATDYGLIDIIKALVATGADTEAPCWSDKDGAWKGNPEWSYRNGFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTCGTGSVTSTKLTMMRSLLKAGAD 127
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A1I8AU88_9BILA (ANK_REP_REGION domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AU88_9BILA) HSP 1 Score: 56.2 bits (134), Expect = 3.430e-6 Identity = 46/144 (31.94%), Postives = 62/144 (43.06%), Query Frame = 3
Query: 81 HKYTGNMRGVIRALEAGASVNGHYALPYAPLMVAANRADEKMVKF-LVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAVFLEKDRPGAFAVVQELLKAGADPGLVAKDG 509
H N V + + G N H A PL +A+ +D + V LV GA L+ G +H A + VDN+KALL++GA+PN D IG TPL L D AV + LL A+ G+ G
Sbjct: 135 HVQARNADKVEKLCQQGLDANFHDADGETPLTIASGVSDNRAVIIQLVGGGAHLDFRN-------------SEGQTGMHKAAFLSMVDNVKALLELGASPNYRDQIGLTPLYYSMLMAD--SNEAVAEMLLAEAAEVGVTDMHG 263
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A6H5IW87_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IW87_9HYME) HSP 1 Score: 55.5 bits (132), Expect = 8.360e-6 Identity = 34/110 (30.91%), Postives = 58/110 (52.73%), Query Frame = 3
Query: 93 GNMRGVIRALEAGASVNGHYALPYAPLMVAANRA-DEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAV 419
G R + L G+ N L Y PL + A+R D+++V+ ++ +D++++ D ++ K G +H A+ K N+K LL+ GANPN+AD+ G PL +
Sbjct: 563 GKERNIKDLLRKGSDPNLTNTLGYHPLHIIASRPIDDELVEKFIKMCSDIQLSVQVDFSD-------KHGRTPLHLALLNGKKQNVKDLLRRGANPNSADTCGLLPLHVI 665
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A847GXT2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GXT2_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 2.250e-5 Identity = 37/117 (31.62%), Postives = 56/117 (47.86%), Query Frame = 3
Query: 162 YAPLMVAANRADEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAVFLEKDRPGAFAVVQELLKA-GADPGLVAKDG 509
Y PL++A + +V+ LV+ G D + N G ++ +R + K+ L+ LL GA+ NA D G TPL + + G+ VQ LL A GA+ GLV + G
Sbjct: 309 YTPLLIAVENFNRPLVELLVKRGVDPNVPN-----NFGQTALHRAVARLPYGEAEALKLQVLELLLDYGADVNARDEHGLTPLDCIRRRHEEGGSADAVQSLLLAHGAESGLVERKG 420
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: A0A2E7DJL1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7DJL1_9GAMM) HSP 1 Score: 53.5 bits (127), Expect = 3.220e-5 Identity = 44/133 (33.08%), Postives = 56/133 (42.11%), Query Frame = 3
Query: 171 LMVAANRADEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNA--------------------ADSIGCTPLMAVFLEKDRPGAFAVVQELLKAGADPGLVAKDG 509
LMVA + E+M FL+E+GAD E+A +G A+HSAV K LL GANPNA D IG TP D ++ LL+ GADP + +KDG
Sbjct: 243 LMVAIDSGHEEMAIFLLENGADPELAA--------------TGRTALHSAVQHKMHSLAKTLLSYGANPNAQLSRNMPVFSRVILIDNGLSVDKIGATPFFLAAGYND----LEMMDILLEGGADPFINSKDG 357
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Match: UPI00145F30F3 (ankyrin repeat domain-containing protein n=1 Tax=Aromatoleum diolicum TaxID=75796 RepID=UPI00145F30F3) HSP 1 Score: 53.1 bits (126), Expect = 4.200e-5 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 3
Query: 153 ALPYAPLMVAANRADEKMVKFLVESGADLEIATLCDVTNGGGRRAWKSGSRAVHSAVHGAKVDNLKALLKMGANPNAADSIGCTPLMAVFLEKDRPGAFAVVQELLKAGAD 485
ALP PL+ A D V+ + GAD+ + R +G A+H A A + ++ LL GANP+AAD+ G TPL + + + AV + LL AGAD
Sbjct: 127 ALPR-PLIDAVACGDAFRVRARLAEGADVSVTDS---------RVRYTGRTALHHAAQRADLATVELLLAAGANPDAADAQGNTPLHLLAMRRRSDSEVAVARSLLDAGAD 227 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig816.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig816.17.1 >prot_P-littoralis_Contig816.17.1 ID=prot_P-littoralis_Contig816.17.1|Name=mRNA_P-littoralis_Contig816.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp MRGVIRALEAGASVNGHYALPYAPLMVAANRADEKMVKFLVESGADLEIAback to top mRNA from alignment at P-littoralis_Contig816:85909..86420- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig816.17.1 ID=mRNA_P-littoralis_Contig816.17.1|Name=mRNA_P-littoralis_Contig816.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=512bp|location=Sequence derived from alignment at P-littoralis_Contig816:85909..86420- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig816:85909..86420- >mRNA_P-littoralis_Contig816.17.1 ID=mRNA_P-littoralis_Contig816.17.1|Name=mRNA_P-littoralis_Contig816.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=414bp|location=Sequence derived from alignment at P-littoralis_Contig816:85909..86420- (Pylaiella littoralis U1_48)back to top |