prot_P-littoralis_Contig809.39.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig809.39.1
Unique Nameprot_P-littoralis_Contig809.39.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length133
Homology
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BLAST of mRNA_P-littoralis_Contig809.39.1 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 7.050e-19
Identity = 50/99 (50.51%), Postives = 56/99 (56.57%), Query Frame = 0 
Query:    1 MDTDQHSIPRRQSLGSRPAITPSLSVQRAEDGRRKRRTSGRXXXXXXXXXXXXXXXXAE---YPPGFRRGRAGIDEAKLPVYKFLQQGVREEGAVELLT 96
            MDT   S P RQSLG+RPA+TP+ S ++ ED RRKRRTSG                      YP GF+ GR G D AKLPVY FLQQG  EEG  E  T
Sbjct:   24 MDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122
[Close]
BLAST of mRNA_P-littoralis_Contig809.39.1 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.060e-18
Identity = 59/128 (46.09%), Postives = 69/128 (53.91%), Query Frame = 0 
Query:    1 MDTDQHSIPRRQSLGSRPAITPSLSVQRAEDGRRKRRTSGRXXXXXXXXXXXXXXXXAE---YPPGFRRGRAGIDEAKLPVYKFLQQGVREEGAVELLTKE--STLLRIFSS----------TGSRTS 113
            MDT   S P RQSLG+RPA+TP+ S ++ ED RRKRRTSG                      YP GF+ GR G D AKLPVY FLQQG  EEG  E  T E  + + R +SS          TG+RTS
Sbjct:   24 MDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTS 151
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig809.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1G6_9PHAE7.050e-1950.51Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRI1_9PHAE1.060e-1846.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig809contigP-littoralis_Contig809:116678..117272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig809.39.1mRNA_P-littoralis_Contig809.39.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig809 116194..117394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig809.39.1 ID=prot_P-littoralis_Contig809.39.1|Name=mRNA_P-littoralis_Contig809.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp
MDTDQHSIPRRQSLGSRPAITPSLSVQRAEDGRRKRRTSGRAPAGTDAAS
TSAKEEGAEYPPGFRRGRAGIDEAKLPVYKFLQQGVREEGAVELLTKEST
LLRIFSSTGSRTSGLEWGRTRLLRRLRRPKLE*
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