prot_P-littoralis_Contig12.37.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE) HSP 1 Score: 292 bits (747), Expect = 7.640e-96 Identity = 164/232 (70.69%), Postives = 183/232 (78.88%), Query Frame = 0
Query: 1 MATDEAKVVDAVPPPPAYYKLFSPDAAL-GVHQPATGAAAGXXXXAG-----SPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAMLQCASARQGAAACLGLVPSGASDTKE------DSGGVPMDVVDDLGG 220
MAT+EAKVVDAVPPPPAYYKLFSP A+L G A+ A A AG +PN FPL+PPRPPGPGETY MFGMPYSSEPV +ELLPPEK+VVP +G+AIDFRA LK LLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARH++LERLR QAE+NDAV S LEAAM QC SA++ A +CLGL GAS E G V MD+ + +GG
Sbjct: 1 MATEEAKVVDAVPPPPAYYKLFSPGASLTGQDVGASAAIAAPGDSAGGAGGTAPNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESAFSCLGLQEHGASCVAEGERERAQQGRVEMDIDETIGG 232
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI) HSP 1 Score: 222 bits (565), Expect = 1.480e-69 Identity = 127/198 (64.14%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 67 MFGMPYSSEPVTEELLPPEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAMLQCASARQGAAACLGLVPSGASDTKEDSGG------VPMDVVDDLGGXXXXXXXXXXXXXXXXXXXXXXXXXKGKLRAVEPAGVD 258
MFGMPYSSEPV +ELLPPEK+VVP +G+AIDFRAELK LLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARH++LERLR QA++NDAV SALEAAM QC SA++GA +CLGL +GAS E G V MDV + +GG KGKL AV V+
Sbjct: 1 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCLGLQENGASGVAEGEGERARQGRVEMDVDETIGGAATTAVGEGGVAGEGVAASEFGKAGKGKLGAVLAPAVE 198
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.230e-26 Identity = 67/177 (37.85%), Postives = 100/177 (56.50%), Query Frame = 0
Query: 4 DEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVVPPTGEAI-DFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAM 179
DE +VV A+P PP Y+K F + F L+ RPP P +Y FG+PYS+E L+P EK + P + +FR+E+++LL SIMANY Q +++L+ PS+ K+ ++E LFVNFHS+LN++R HQAR ++L RL+ Q + + LE+ M
Sbjct: 3 DELQVVSALPAPPDYFKRFEDE------------------------NFQLK--RPPVPEGSYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRNFRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQM 153
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.480e-23 Identity = 63/183 (34.43%), Postives = 102/183 (55.74%), Query Frame = 0
Query: 7 KVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLPPEKMVV--------PPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTSALEAAMLQ 181
++V PPPPA++ L+ D V+ PA PP P P Y MFG PYS++ V +LLP + + P +AID++A+LK+L S++AN Q +++L+ +P +EK+ D+E LFVN H+L+N++R HQAR +I++ LRGQ E+ A + + +++
Sbjct: 11 EIVSEFPPPPAFFSLYQID---DVNAPA--------------------PPAPMAPN--YHMFGTPYSTKDVVPDLLPDDSKKLYLSDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQIEEKQAAINDIRRVLIE 168
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A329SFW2_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFW2_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.910e-20 Identity = 50/119 (42.02%), Postives = 80/119 (67.23%), Query Frame = 0
Query: 56 PRPPGPGE-TYTMFGMPYSSEPVTEELLP-PEKMVVPPTGE-----AIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 167
P PP P E TY MFG PYS++ V +LLP P K + P GE +D++AE+K++ S++AN+ + +++L+ P+ +EKL DVE LF+N H+L+N +R HQAR +++ L+ Q ++
Sbjct: 34 PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPGKKLYAPQGEDGGGAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 152
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: H3GJZ4_PHYRM (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJZ4_PHYRM) HSP 1 Score: 97.1 bits (240), Expect = 1.330e-19 Identity = 57/170 (33.53%), Postives = 94/170 (55.29%), Query Frame = 0
Query: 4 DEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGE-TYTMFGMPYSSEPVTEELLPPEKMVVPPTGEA-----IDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 167
D ++V P PP ++ L+ A G +G P PP P E TY MFG PYS++ V +LLP +K+ P E +D++AE+K++ S++AN+ + +++L+ P+ +EKL DVE LF+N H+L+N +R HQAR +++ L+ Q ++
Sbjct: 148 DTPEIVSEFPAPPKFFALY-----------ADGVESG---------------PAPPEPMEPTYHMFGSPYSTQDVVPDLLPGKKLYAPAGEEGDEDAPVDYKAEMKKINRSLLANFVELVDVLIKKPAMFNEKLDDVELLFLNMHNLINSFRPHQARETVIQMLKTQVQE 291
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A024GGG9_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGG9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.470e-19 Identity = 59/176 (33.52%), Postives = 95/176 (53.98%), Query Frame = 0
Query: 7 KVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGP-GETYTMFGMPYSSEPVTEELLPPE--KMVVP------PTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQNDAVTS 173
++V PPPPA++ L+ V + P PP P Y MFG PYS++ + +LLP + K+ +P P ++ID++A+LK+L S++AN Q +++L+ +P +EK+ D+E LFVN H+L+N++R HQAR I+ L+ Q E+ A S
Sbjct: 34 EIVSEFPPPPAFFSLYQ--------------------------VNNADAPLPPAPMAPNYHMFGTPYSTKDIVPDLLPDDSKKLYLPTLSTQDPKEQSIDYKAQLKKLNRSLLANCIQLLDVLIRNPKLFNEKVDDLELLFVNMHNLINKFRPHQAREHIILMLQSQIEEKQAAIS 183
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A8K1CA38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA38_PYTOL) HSP 1 Score: 94.0 bits (232), Expect = 2.970e-19 Identity = 59/170 (34.71%), Postives = 95/170 (55.88%), Query Frame = 0
Query: 4 DEAKVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGETYTMFGMPYSSEPVTEELLP-PEKMV-------VP-PTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQ 164
D ++V A P PPA++ L++ G P T +EP TY MFG PYS++ V +LLP P K + VP + E ID++A++K++ +S++AN+ + +++L+ PS +EKL+D+E LF+N H+L+N +R HQAR I+ L+ Q
Sbjct: 17 DAPEIVSAFPAPPAFFVLYADGVESGPPPPET-----------------MEP--------TYHMFGTPYSTKDVVPDLLPQPGKKLYLDGKDSVPGESSEVIDYKAQMKKINHSLLANFTELVDVLIKKPSLFNEKLADLELLFLNMHNLINAFRPHQARETIIHMLKTQ 161
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A2P4YE96_9STRA (Mediator of RNA polymerase II transcription subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YE96_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.320e-18 Identity = 57/169 (33.73%), Postives = 97/169 (57.40%), Query Frame = 0
Query: 2 ATDEA-KVVDAVPPPPAYYKLFSPDAALGVHQPATGAAAGXXXXAGSPNVFPLEPPRPPGPGE-TYTMFGMPYSSEPVTEELLP-PEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 167
A +EA ++V P PP ++ L+ A G +G P PP P E TY MFG PYS++ V +LLP P++ + + +D++AE+K++ S++AN+ + +++L+ P+ +EKL DVE LF+N H+L+N +R HQAR +++ L+ Q ++
Sbjct: 556 AEEEAPEIVSEFPAPPKFFALY-----------ADGVESG---------------PAPPEPMEPTYHMFGSPYSTQDVVPDLLPQPDRKLYAQGDDPVDYKAEMKKINRSLLANFVELVDILIKKPAMFNEKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 698
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Match: A0A225WFP8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFP8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.060e-17 Identity = 41/104 (39.42%), Postives = 70/104 (67.31%), Query Frame = 0
Query: 65 YTMFGMPYSSEPVTEELLP-PEKMVVPPTGEAIDFRAELKRLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLILERLRGQAEQ 167
Y MFG PYS++ V +LLP EK + E + ++AE+K++ S++AN+ + +++LV P+ + KL DVE LF+N H+L+N +R HQAR +++ L+ Q ++
Sbjct: 5 YHMFGSPYSTQDVVPDLLPHAEKKLYAKNDETVHYKAEMKKINRSLLANFVELVDVLVKKPAMFNAKLDDVELLFLNMHNLINAFRPHQARETVIQMLKTQVQE 108 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.37.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig12.37.2 ID=prot_P-littoralis_Contig12.37.2|Name=mRNA_P-littoralis_Contig12.37.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=263bpback to top |