mRNA_P-littoralis_Contig8.164.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig8.164.1
Unique NamemRNA_P-littoralis_Contig8.164.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 541 bits (1395), Expect = 1.240e-185
Identity = 286/326 (87.73%), Postives = 296/326 (90.80%), Query Frame = 1
Query:    1 MEVDACPDMGVEEKKGEEPAVPAATAAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMAAFGHRRAI 978
            MEVDA    GVEEKKGEE  VPA  A+          G+   NIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNG DVSIYDAMEVACTAVGA+GL LNEALVEKQK+LYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNS+PLFLLMNPSPAQGSKELPVLIHESESHMLDG +QS FVQL FQLETTQAEQISVEHVAKATPTDG+SSIDLHAGAVSTSLRTLLARIEILRRFLEETK GN++VDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSV YLASVQKSAGS+NDLADKFM AFGHRR I
Sbjct:    5 MEVDA----GVEEKKGEEQKVPATAASAP--------GKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFGHRRPI 318          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 7.370e-99
Identity = 167/198 (84.34%), Postives = 172/198 (86.87%), Query Frame = 1
Query:    1 MEVDACPDMGVEEKKGEEPAVPAATAAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQ 594
            MEVDA    GVEEKKGEE  VPA  A+          G+   NIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNG DVSIYDAMEVACTAVGA+GL LNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNS+PLFLLMNPSPAQGSKELPVLIHESESHMLDG +QS FVQL FQ
Sbjct:    5 MEVDA----GVEEKKGEEQNVPATAASAP--------GKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ 190          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 276 bits (706), Expect = 7.370e-83
Identity = 144/286 (50.35%), Postives = 193/286 (67.48%), Query Frame = 1
Query:  121 DRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEA-LVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHM-LDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMAAFGHRR 972
            +R I LHPL +ITISDH T + +G   +  G +V+GLL+G Q GL+VSI DA E+  T +G DG+ +  A  V  QKDLYT VY  YE+LGWY+VG +    D+ + R+MTK+N +P FLLM+PSP   + +LP+ ++ES+  M  D     +FV   FQL+T QAE+I++E +AKATPTDG++S+DLH  ++  SLRTL  R + L  FL+ TK G V  DY LLRQ+SSICNQLP +D A+   +F+ E+ND L V YLASV KS+ S+ DL DK  A   H R
Sbjct:   23 ERKIFLHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYT-LGDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSPDPEASDLPISLYESKMVMGADDTPTIVFVTSEFQLQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKGDFITEYNDMLMVNYLASVTKSSASLGDLIDKHSAVVSHHR 307          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.800e-76
Identity = 129/283 (45.58%), Postives = 189/283 (66.78%), Query Frame = 1
Query:  103 KGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEA-LVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKF 948
            K     +  + LHPL +I +SDH+T +  GG   + G +V+GLL+G Q GL+VSI DAME+  + + A+G+ + EA  V   KDLY   +   ++LGWY+VG EV E+D+ I R+MTK+N +P FLLMNP+P + +K+LP+ ++ESE H+++     +FV   FQL+T Q E+I     AK    +G +++DLH   VS+SL+TL +R   L ++LE TKNG V  DY LLRQ++S+CNQLP +D  + S EF+ ++ND+L V YLAS+ K    +NDLA+KF
Sbjct:   24 KAAAASENKVFLHPLAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYS-LDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQLQTMQMERIXXXXXAKEKAHEGEATLDLHMNTVSSSLKTLSSRASALVQYLEATKNGTVPTDYRLLRQVASVCNQLPAVDTDELSGEFVGDYNDTLMVNYLASITKGTNELNDLAEKF 305          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.030e-73
Identity = 132/303 (43.56%), Postives = 198/303 (65.35%), Query Frame = 1
Query:   67 AATAAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDG-RSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQ--------FSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKF 948
            AATAA       K  G+G  +I LHPL +ITISDH+TRVSTGGG      +++G+LFG ++G ++ IYDA E+    VG + + L++A V KQ +LY AVYP Y++LGWY+VG E    D+ +Q+QM    + P+F+L++P P + +K LPV +++SE     G  + ++FVQ  FQL+T QAEQI +EHVA++TP +G S+I+ HA  ++TSL  L +R+ +LRR+L   + G+V  D+ LLRQI+++ ++L  M  A          SE   R+  D+L+VT LA++QK A +++  A KF
Sbjct:    7 AATAAAEGAEESKSAGDGQLSIHLHPLAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGE-IVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEPPKDAKALPVTVYQSEDQAGGGGAAATVFVQGSFQLQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAMGNASGSGGGDAALSEALARDRCDALAVTALAALQKGAAAMDAAAHKF 308          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.030e-70
Identity = 128/294 (43.54%), Postives = 195/294 (66.33%), Query Frame = 1
Query:   76 AAVSAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGL-ALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMA 954
            A  S+E    G  E +R I LHPL ++ +SDH T + TG   +  G +V+G+L+G Q GL VSI DA+E+A   + A G+  ++   V +QK LY  VY  +E+LGWY+VG EVT +D  IQ++ TK+N +P FLL+ P P   +K+LP+ ++ES+   ++   +  FV   FQL+TTQAE+I++E V+KA+ T G+SS+DLH   +S+SLR+L +R +IL  +L+   +  V VD+ LLR+I+S+CNQLP  D  +    F+ +FND+L + +LA + KS+ SV++L+ KF A
Sbjct:   37 AMASSEPGTGGDPESNRKISLHPLAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYE-LDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVPDPEAKQLPLTLYESQWTQVNEEMKMTFVPCSFQLDTTQAERITMEAVSKASTTAGVSSMDLHVQELSSSLRSLASRTQILVSYLKAIADQQVPVDHKLLREIASVCNQLPAADAQELQGAFLSDFNDTLLINHLALITKSSNSVSELSTKFSA 329          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A5D6XJP9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.020e-65
Identity = 118/292 (40.41%), Postives = 182/292 (62.33%), Query Frame = 1
Query:   91 ERTQKGKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNP--SPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHA--GAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFMA 954
            +R ++  G G+R I LHPL ++  +DH TR   G     +  +VIG LFG Q+GLDV++YD+ E+    V  D + L++  V  +   ++ V+P +E+LGWYTVG++V   DL   R + +FN +PLF+L++P        K+LPV + ESE HML+G    +FV+ PF++ET++ E ISV+H++K  P    S   LH   G V  +++ L  ++++L RFL+  KNG+  +D  LLR ISS+CNQLP M    F   F++E+ND+L V +LA++ K A + N + D+F A
Sbjct:   16 QREERSSGGGERQIQLHPLVLMNAADHFTRERRGCAPGASPPQVIGALFGVQSGLDVAVYDSFELKYDVVNGD-VQLDKEFVTSRIQQFSQVFPGFELLGWYTVGSKVQPSDLATHRSIMEFNESPLFMLLDPVSKALNTKKKLPVTLFESELHMLNGAPTMLFVKAPFKIETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAMKMLDRQVDVLVRFLQAMKNGDAPMDRNLLRHISSVCNQLPAMTSKSFDASFLQEYNDALLVAFLATLTKGATNANTVVDRFSA 306          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: UPI000C87477B (COP9 signalosome complex subunit 6 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C87477B)

HSP 1 Score: 227 bits (579), Expect = 1.560e-64
Identity = 113/280 (40.36%), Postives = 180/280 (64.29%), Query Frame = 1
Query:  136 LHPLTVITISDHHTRVST------GGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSS---IDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKF 948
            LHPL ++ ISDHHTRV        GGG+  AGGRV G + G Q G  V I+++ E+ C     +   L+   +EK+ +LY  V+P + +LGWY+ G++  E D+ I R +   N +P+++L+NPS     K+LPV I+ESE H++DG  Q IFV+  + +ET +AE+ISV+HVA   P+DG S+   +  H   + ++++ L +R++IL ++L   + G++ +D  LLRQ+SS+  +LPTM+  +F ++F+ EFND+L +TYLA     + ++N+L DKF
Sbjct:   13 LHPLVIVNISDHHTRVKAQGLYHGGGGSGGAGGRVFGCVIGVQRGRTVEIFNSFEILCDP---ETHTLDRPFLEKKMELYKKVFPNFYVLGWYSTGSDAQESDMLIHRALMDINESPVYVLLNPSTNPTRKDLPVTIYESELHVIDGIPQLIFVRSNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRVKILHQYLVAMERGDIPLDNSLLRQVSSLLRRLPTMESEKFQDDFLMEFNDTLLITYLAMFTNCSSTMNELVDKF 289          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: F0Y0C1_AURAN (Trehalase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0C1_AURAN)

HSP 1 Score: 243 bits (620), Expect = 4.530e-64
Identity = 126/282 (44.68%), Postives = 181/282 (64.18%), Query Frame = 1
Query:  106 GKGEGDRNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFM 951
            G+    R++ LHPL ++ +SDH TRV  GG        V+GLLFG Q GLDV+++DA+E++     ADG  L+   ++KQ +L+T VY   E+LGWY +    T   L + R+   +N +PL L+M+P P+  SK+LP+ I E+E  ++D     +F  LPF LET QAE+IS+E VAK  PTDG S++D H  AV TSLRTL +R+ +L  +L     G    D+ LLRQ+S +C+ LPT      + + MR++ND+L V+YLASV K+A +VNDL++KFM
Sbjct:  834 GRAATQRHVGLHPLAIVGVSDHFTRVKLGGARVAPDSPVLGLLFGKQVGLDVAVFDAIELSM----ADG-KLDHDFLKKQAELFTDVYADRELLGWYCLAKSATPAHLDLHREFLAYNESPLCLMMDPEPSAESKDLPITILEAEVQVVDDVPTMLFATLPFTLETLQAERISMEIVAKTAPTDGESALDTHVEAVDTSLRTLGSRVAVLVDYLRAVAGGKAEPDFALLRQVSGLCDTLPTGGAPDQTRDLMRDYNDALMVSYLASVTKNANAVNDLSEKFM 1110          
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Match: A0A8J2WWX0_9STRA (Trehalase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWX0_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.940e-63
Identity = 125/298 (41.95%), Postives = 191/298 (64.09%), Query Frame = 1
Query:   76 AAVSAERTQKGKGEGD----RNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLETTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLEETKNGNVTVDYPLLRQISSICNQLPTM--DGAQFSEEFMREFNDSLSVTYLASVQKSAGSVNDLADKFM 951
            A+  A  T+KG+        R + LHPL ++ +SDH TRVS GG  Q AG  V+GLLFG Q GL+V + DA+EV  T    +   ++   +E+ K LYT VY   +++GWY V    T   L +  +  K+N +PLFLLM+P P Q +K+LP+ ++E+E H L    +++F  +PFQLETTQ E++++E VA+   TD    +D H  ++ TSL+TL AR+  LR +L   + G V  D+ LLR++ ++C++LP++  DGA F E F+R++ND+L+  +LA+  K+A +VNDL+DKF+
Sbjct:  682 ASAHASATKKGRMAAAESTARTVALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLT----EATKVDAQFLEQSKALYTEVYEDRDLVGWYAVAPAPTANHLALHEEFVKYNESPLFLLMDPQPQQDAKDLPIQVYETEVHDL----KTVFATVPFQLETTQTERVAMEAVAQTGCTDRELMLDTHVASLDTSLKTLAARVRALRDYLAAVRAGTVAADHSLLRKLGALCDRLPSLKSDGA-FEEAFLRDYNDALATAFLATATKNAAAVNDLSDKFV 970          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig8.164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH4_ECTSI1.240e-18587.73COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A6H5KLY7_9PHAE7.370e-9984.34JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2B7N9_9STRA7.370e-8350.35COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
A0A7S2BCI8_9STRA1.800e-7645.58COP9 signalosome complex subunit 6 n=1 Tax=Florenc... [more]
A0A835YT38_9STRA1.030e-7343.56JAB_MPN domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2S2E8_9STRA2.030e-7043.54COP9 signalosome complex subunit 6 n=1 Tax=Rhizoch... [more]
A0A5D6XJP9_9STRA3.020e-6540.41COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]
UPI000C87477B1.560e-6440.36COP9 signalosome complex subunit 6 n=1 Tax=Dioscor... [more]
F0Y0C1_AURAN4.530e-6444.68Trehalase n=1 Tax=Aureococcus anophagefferens TaxI... [more]
A0A8J2WWX0_9STRA1.940e-6341.95Trehalase n=1 Tax=Pelagomonas calceolata TaxID=356... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig8contigP-littoralis_Contig8:703473..710015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBH4
Preferred nameCOPS6
PFAMsJAB,MitMem_reg
Model size2397
Max annot lvl2759|Eukaryota
KEGG rclassRC00049
KEGG koko:K01194,ko:K01410,ko:K12179
KEGG ReactionR00010
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0008150,GO:0008152,GO:0008180,GO:0009056,GO:0009057,GO:0009653,GO:0009888,GO:0009987,GO:0010387,GO:0016043,GO:0016333,GO:0019538,GO:0019827,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030163,GO:0030582,GO:0030584,GO:0030718,GO:0031647,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0036099,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046483,GO:0046983,GO:0048138,GO:0048140,GO:0048232,GO:0048468,GO:0048608,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050821,GO:0050896,GO:0051276,GO:0051603,GO:0051704,GO:0051716,GO:0060429,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0090304,GO:0098727,GO:1901360,GO:1901564,GO:1901565,GO:1901575
Exons8
Evalue3.43e-194
EggNOG OGsCOG1310@1|root,KOG3050@2759|Eukaryota
Ec32 ortholog descriptionJAB1/MPN/MOV34 metalloenzyme domain
Ec32 orthologEc-27_003960.1
EC3.2.1.28,3.4.24.59
Descriptionprotein deneddylation
Cds size981
COG categoryV
CAZyGH37
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03029,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig8.164.1prot_P-littoralis_Contig8.164.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig8 704889..710015 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791639.5027428-UTR-P-littoralis_Contig8:703472..7048881680791639.5027428-UTR-P-littoralis_Contig8:703472..704888Pylaiella littoralis U1_48UTRP-littoralis_Contig8 703473..704888 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791639.5196426-CDS-P-littoralis_Contig8:704888..7050051680791639.5196426-CDS-P-littoralis_Contig8:704888..705005Pylaiella littoralis U1_48CDSP-littoralis_Contig8 704889..705005 -
1680791639.5295668-CDS-P-littoralis_Contig8:705634..7057351680791639.5295668-CDS-P-littoralis_Contig8:705634..705735Pylaiella littoralis U1_48CDSP-littoralis_Contig8 705635..705735 -
1680791639.544063-CDS-P-littoralis_Contig8:706199..7062921680791639.544063-CDS-P-littoralis_Contig8:706199..706292Pylaiella littoralis U1_48CDSP-littoralis_Contig8 706200..706292 -
1680791639.5547822-CDS-P-littoralis_Contig8:706821..7068971680791639.5547822-CDS-P-littoralis_Contig8:706821..706897Pylaiella littoralis U1_48CDSP-littoralis_Contig8 706822..706897 -
1680791639.5674622-CDS-P-littoralis_Contig8:707226..7073761680791639.5674622-CDS-P-littoralis_Contig8:707226..707376Pylaiella littoralis U1_48CDSP-littoralis_Contig8 707227..707376 -
1680791639.5775263-CDS-P-littoralis_Contig8:707876..7079651680791639.5775263-CDS-P-littoralis_Contig8:707876..707965Pylaiella littoralis U1_48CDSP-littoralis_Contig8 707877..707965 -
1680791639.5882215-CDS-P-littoralis_Contig8:708273..7084841680791639.5882215-CDS-P-littoralis_Contig8:708273..708484Pylaiella littoralis U1_48CDSP-littoralis_Contig8 708274..708484 -
1680791639.6046345-CDS-P-littoralis_Contig8:709871..7100151680791639.6046345-CDS-P-littoralis_Contig8:709871..710015Pylaiella littoralis U1_48CDSP-littoralis_Contig8 709872..710015 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig8.164.1

>prot_P-littoralis_Contig8.164.1 ID=prot_P-littoralis_Contig8.164.1|Name=mRNA_P-littoralis_Contig8.164.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
MEVDACPDMGVEEKKGEEPAVPAATAAVSAERTQKGKGEGDRNIMLHPLT
VITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAV
GADGLALNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMT
KFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSQSIFVQLPFQLE
TTQAEQISVEHVAKATPTDGMSSIDLHAGAVSTSLRTLLARIEILRRFLE
ETKNGNVTVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVTYLA
SVQKSAGSVNDLADKFMAAFGHRRAI*
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mRNA from alignment at P-littoralis_Contig8:703473..710015-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig8.164.1 ID=mRNA_P-littoralis_Contig8.164.1|Name=mRNA_P-littoralis_Contig8.164.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6543bp|location=Sequence derived from alignment at P-littoralis_Contig8:703473..710015- (Pylaiella littoralis U1_48)
ATGGAAGTTGATGCTTGCCCTGACATGGGAGTGGAAGAGAAAAAGGGAGA AGAGCCAGCCGTTCCTGCTGCTACGGCTGCCGTTTCTGCGGAGAGAACCC AAAAAGGGAAAGGCGAAGGCGATCGCAACATTATGCTGCATCCGGTGCGT GTTATCTGCTCTGGTGCATGTCTCACGCCCTGCCCGGTCTCTGTGGTTCG AGGGAAGCTGCAGGAGTGCTCAAGTTCTTCGTGTCCATTGTCTGCGCGCA GAGACCCCGGTTATCAGTTTCCGGTTGTTTCGAATTTGGTCAAAAACTCT GTAAATGTTACTTTTGTTGTACGTACATATTACATACAAGGATTAGACAC CCTAAATCCATATCATACCTGGTCGCCCCGGTGGTTCAGTTGGTAATCAA TGTAACCGTTTGACATTCACTCGTGAGCTCGAATCCCAGCACAGAAAACA CGATCTGGGTTTTCTTCTCACAATACACGTGAAAGTGGATAGCGATTGAT TCGTGAGTAAACAAAATTCGATCGCACCATCGACGAGGGAAAGGGATTGC TGTCCCCTTTCTCGCGATAAAAGCTCAACCAAACAAGGCAGGCACCGCAG AGAGAAGCGGAGGAAAAAAAAAAACTCCTGTGTCGACTTCCCCCTGTGTG ACCCCAGTTGGAGGGTCGACCTACCCGAAAGGTGTAGAGTGACGTCCAAT TAAAGGGACGACAACACACACACACACACCTGGTATCACATCACACATAG TCTGTACGTTGTACGTATCATATTGTACATATCATACCACGAAGCACAGC GAAGCAGATACCGACAGAACGCTCTTTATTCCAGGTACTTGGATTGAAGT CGCCCAGGGCAGCAGTGCCATGGTGGCGGGAGGTCTTAGATACAACCGTC TATCTGTGCACAGCACGTAGAACATTCATAAGTATTGAGGTTGTACTCAC ACAGAGTGTCTTGCTTTCGAGTTTGCTCTGGCAGTCCGCCTGTATTACTG TACTCTTAACACTCAAGTTTGCTTTGATACGTCACGGAGTCAGTACAATC TACTGCTGCTGTCGGAGTATCGTGCTCTGAAGAGCTTGTTTTCTTGTCTT GATAGGCAGCAGTCCGGTAACACCTCGTCCGCCAACTGCTAACCAGCAAA TCTCACTGCTCCTTGGTTCGTTTGCCTTGGTATCAACATACCCGATCGCA TTACGAGTAGTGCTTTGTGTTGATGCTGCTGCTTTTTTTCGAACACGTGT CATGTACGAGTATCACAAGTACAAAGGATATAAGCTCACCTTCCGGTGGG GCGCCGTGCAGTCCACATACCCCCCCGCATGATGCTTTGACGGCGGCTGG TCTTTATTTGTGTCTTGCGAGTTCTCCTTGCGACAGGTGACGGAGGTTTG AAAGCGTCGGCTCGCCTGTCGATGTAGATACAGAAGGCGAAAACAATGTG TATTTCGGAAACGTGCGTGCATCAATGTGTCTTGGGGTAACGTGCAGTGG TCTTTCTCCCCGCATGTGCCGTGCGCAACAGCTTACGGTCATTACGATTT CAGACCACCACACTCGAGTCTCAACGGGAGGGGGAGCCCAGGAGGCGGGA GGGCGAGTGATCGGTCTTCTGTTCGGATCTCAAAACGGGCTGGACGTAAG CATCTATGATGCGATGGAGGTCGCATGCACTGCTGTTGGTGCGGACGGTT TGGCACTGAATGAGGCTTTGGTCGAGAAGCAAAAGGACCTATGTGAGTTG CAACTTTCTTGAAACAGTGACGATTGCCTCTGGAACGTATTCTACATCTA CCCGTGGTACTACCAACCCCCCCTCCAGCTGTTTTGATTGATTTGGCCTT TTATCTCCTCGTTTGGCCCACCCCGACCATTGAATATTGTACGCCGTACG CCAAGCCCCGCAACCTGGCCTTCTCGTTGTTCGACGGATAAAGAAACGTG ATGTTCGCCCTCATAAATTCTGGTACCGCGATTTTGGGCATCTTGAAAAG TCCCACACGTGTCCTAACCCGTACTCTCGTCTTTGCAATACCTTATCCAG ACACTGCGGTGTATCCGATGTACGAGATTTTGGGGTGGTACACAGTGGGC ACGGAGGTCACGGAGTTGGATCTGGGCATTCAACGCCAGGTCAGATGAGC GTGATACATACGCATACATGGCTACAAACATATGACGGGACTGCGGTGTA TTGGGTGTGCCCGCATGAGCAGAAATCGGCAAGACATTCCTGTGGTGAAA TGCGTAGAGAATGTGAAGCGGCAGCAAAGTGATGGTGGCGTCATGCTTTT TCTGCGCTGCTGTGAATTAAGGCATTTTTTGTTTGTCGTCATGGTGACTC ATTTTGATACGAACTGTCCTTGTGGTGAACGTTTACGCGGAATTGAGCCT TACACCCGTGTATAGGCGCGGGTTGTGCGTGCGAATGAAGATCCAGCAAT TTAAGAATGTGAAGTTCGGGTATCCCCGCCCTTGAGCAGTCTACGGAAGG CTTGATTTGAGTCTGCTCTTGAGGAAGATTTTGAACACAATGAGCCTGCC TCACCGTATCCCACCTTCATCCCAACTGATTGCCATGATAACCTGCGCTC ATCACCCCCTGCCCCCGGTCTTCCCCGATCCCGCGATAGATGACGAAGTT CAACTCGGCGCCTCTCTTCTTGCTCATGAATCCCAGCCCAGCTCAAGGGT CGAAGGAGCTTCCTGTATTGATTCACGAGTCGGAGTCACACATGTTAGAC GGGAGATCACAGTCAATCTTCGTGCAGCTTCCCTTCCAGGTGAGTTCCGA GAGTACATACGTATACTTCGGAAACGAAGCTTCGGAATCTCCACGAGCCA TGCTGAACCTATGTTAGCGTTCGCTGGACCTTAGACCGTAGTTAGTTGTG CGACTGAATTGCAATTGTACTTCGAAGTGTTGTCGTTCGATCTTTGAAAA AGTCGCCGACAGAGAATCTCTACATCAGCACTACTGGTGGGTGGTGCCCT CGTTACATGCAGCTACCCTTGCATGCAACCGACCTGACAGACCAAAAGCA ACTAAGCGGAGCGCCTTGCCTCCTAAATTGTCCTTGCTACGCTGCCAACA CATTCTTCGCTGTGGCAGCTTGAGACCACCCAGGCGGAGCAGATATCAGT CGAACACGTGGCCAAGGCCACCCCAACTGATGGCATGTCATCAAGTACGT TTAAGCTGCTGCGAAGGTAGCGCACAATTTATCGACCTTTTTGAAAACAC GACATTTGGGCCTCTCGATTTCATTTATATTTCGCAGGTGCTATGTGCCC TGGTGACAATGGTGCTCATTTCATCTTTCTACTGCTGTACTGCTGTTCGT TCTGAAATGATATACCAGCACCCCTTTCGAACGGATGCCTATATCTGCCA TCCACGGCAATGATGCTCTAGAAAACAACGTGCTGATTAAATAATTCTCA GACGCAGCGGTGGTCCGTTGAAACAAAATGTCGGTGTAGCGGCAGCGATC CACATTTTTCTAGCGTTGTTCCGTTACATAACCCGCTGATAACTTTCCAC TTCCAAGTAGAAAATGAAAGCAAGAACATTGTTCTAAACTCATGCGACGA TAAGCCTATTGATAGACACATGGTGTTTTTGGGTGTCCGATGTTGAATAT GACAAGCCGAACAGAATGCGAAGGCGGCGGCGAATCTCATGTCCTCCGTC CGTCACATTTTGTGCCCATACAGTTGACCTGCACGCAGGGGCAGTGAGCA CATCGTTGCGAACGCTGCTCGCCAGAATCGAGATCCTGCGAAGATTCCTA GAGGAGACAAAGAACGGTGAGAACCTCTGTATGCTGTATTTTTTCACTGA CTACCACGTGGCGTTTGTATCCTCGCCTGGCCGATGTTCTGCGTCACTCG CACGCGGGAGCGGAGCTTTGGAACTTCCGATGGTTCGGTCCTCAAAACGC GGCGGTACTAAGAAATTACACTCGAGCCAAGTTTCATGGCTCGTCTAGTG GGATGTGATACGACTTTTTTCTCGGAGCTCGTTCGGTGCATTCTCCGGCT CAACCAAGACAAGATGCTTCCCAGCAGCCCTGGCTTTTTTCGGCGGTAGT TTCGAAACTATTGCTACGCACTCGAGTTCGAATGTGTACATCAATAGAGA ACGCCCAGATGCACCCCCTCTTGTCAGCAAGCAGATAAAGCTTCGCGGTA AGATCTTGTACAAGCCAGATTTGTGGCGGAATCCCCCTTTTCATTGCCGC ATTTCGCGTCGTGGCTACTCCCGTGCCTAGGTAACGTGACTGTAGACTAC CCTTTATTGCGGCAAATCTCAAGCATCTGCAACCAGCTTCCAACCATGGA CGGCGCTCAGTTCTCCGAGGAGTTTATGCGGGTGAGAGTGTGACGCCTGC TATTGTTGCGATGTTCGGATTTGATGCCTGTCAATGAGTTCGCAAGCCCG TTTGATCTCCATCGAAGCGACGACAGTTTTAATTTTTGCACATTCAGGCC GACTTTTCGGTAAATATGTGGAACTAACCAATAGGTCGTGTTGATAATAA CCTGTTGACCTCAGCGCCACGGACCTCCATTTCTTTTCAAGCAGCCTTCT CGCGATAAAAGCTCAACCAAAGCAAGGCAAGCACCGCAGAGGGAAGTGGA GAAAAAAAAAAAACTCCTGTGTTGACTTCCCCCTGTGTGACCCCAGTTGG AGCGTCGACCCACCCGAAAGATGCAGAGTGGCATCCAATTAAAGGGATGA CAACAAACACACAACACACACACAGCCTTCGCGGCGAAGCACGGGTTGGG TGCAATTTTACAGTTGTGGATTCCGTCTTGCACGTGACGAGTACGCAGAT GAGCATGTGCTCCGTGCTATGGAACGCTAGCGGCTGCGGGAGACGTAATT ATAAGTGTCCTGGTGATGTATGTGCTCCAGTCGCTACTATAGCGTTAGCT TTTGAGTTGGCTTACCCAAATTCGACACCATGTGCTTCTGACTGTTCCAT CGCCTCGCAGGAATTCAACGACTCCCTGTCAGTGACATACCTGGCGTCGG TGCAAAAGAGTGCTGGCTCAGTGAACGACCTTGCTGACAAATTCATGGCG GCATTTGGCCATCGACGAGCTATTTGAGCGCGTGCGAGCTTGCTGTTTGG TTGTGGAACGTGCACCTTCATGGTTTTTGATTCATACACCTGCTGGAATA CTCGAGGACACGTGCAAATCTGCGGCGCTCAAGACTACCACGATTTCGCT TGACTCTAATTCAGATGGGCTTTGCTGGCGGGAACATGAACTTTGTAGCC TCAACGCGCTGCTGCTAGCGTGATGTCCTAGGATCAGTGCCCTCGTGCAG GATTTTTACATTCGAAAACAATTATGTGACCACCTTTTATGATACCGCTG TCTGGCAAATTGCGGTTTTTCTTGCGTACGCATATCATGTGTACATACAA AGTTAGCGTGGAAGATTTTTCAACTTGAGCGCTCACGTACAAATAACTTC AAGAACGGGCTTCATCCTTGGTGGTGAGTTTCTCCCGAGGAACAGACACA CCCGCGGGTGCAGTCTTTTACTGCTGCAGCCGAGGTCACAGAGGGAAGGT CAAACAAAGGTCACTCCTTGTACGTAACGTGTGAGGGTGTGTGTGTTTTT TTATTCGATTTCTTCTGTGGATGCACTAGTCTACGAGTCTACGAGTACAC CTTTCTTGCACGGTACGAAGTGGTTGCCCTAGCCGGGGGGTCACACCGAA GGGTATTTTTGTATTTTCACCAGTACAGCAGCTAGTATACCAGTGTCGGC AGTTTATGCTGTGAACTGGTGAACATGAAATCGTCTGGCGCTTGTCCGAC TACCCCTCCCTTCCCCCGCGTCCGCTACAAATGCAGTCCCTAAGAATATC ATGATGACGTATATACCACCGCCCAATTGATGGCGGACGAGACTCATTCC ACGATAGGGGGTCACTTTTCGGACCCTGGATTGCAACCTGCTCGGCCGAG CGGCTACCTCAGTATGTTCAGAACTACTCTTGTTTCATTTTCGCTCGACC CAAATTTTGTTTCAACACTTAAAGGTTCATTTTTGTGTTCTCTGTTTTTT CTGCCCTTCTGCCTTTTGCCCCCTTCACGTCTGCTTAACCTGAAACTGTT GCTGGGCCGGTGAAGAGAGTAGCACGCCCGATGTCCATTTTTATCGACAC TTTGGCAACTGAATTCGGTCTCATTTGTCTTTTTGTCTTTTTTGTCACTC CTATGTGACCTTTATTTCATTTTGTGACTTGGCTCTGGACCAGGCTCCCT TTTCTTGTTCTATTTTTGTACAGCGTTGTGTGATTTCTCGGGGTCCGTTT TTGTTTTTGCCGGAGTTCCCTTGTCGTGCCTTTAATTTGGTGGATTGAGG GGATCTCCCTAGTACTATATACCTCTTTTGAGGCAGGCAGCCTGTGACCA CGGAAATCGTACCCGACCGGTGGAGTACGGACATTAAAAGGTGCTGAGGA GAGACCGGAATGGTTTTTAATGTGAAGACAACAACAACGACAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig8:703473..710015-

>mRNA_P-littoralis_Contig8.164.1 ID=mRNA_P-littoralis_Contig8.164.1|Name=mRNA_P-littoralis_Contig8.164.1|organism=Pylaiella littoralis U1_48|type=CDS|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig8:703473..710015- (Pylaiella littoralis U1_48)
ATGGAAGTTGATGCTTGCCCTGACATGGGAGTGGAAGAGAAAAAGGGAGA
AGAGCCAGCCGTTCCTGCTGCTACGGCTGCCGTTTCTGCGGAGAGAACCC
AAAAAGGGAAAGGCGAAGGCGATCGCAACATTATGCTGCATCCGCTTACG
GTCATTACGATTTCAGACCACCACACTCGAGTCTCAACGGGAGGGGGAGC
CCAGGAGGCGGGAGGGCGAGTGATCGGTCTTCTGTTCGGATCTCAAAACG
GGCTGGACGTAAGCATCTATGATGCGATGGAGGTCGCATGCACTGCTGTT
GGTGCGGACGGTTTGGCACTGAATGAGGCTTTGGTCGAGAAGCAAAAGGA
CCTATACACTGCGGTGTATCCGATGTACGAGATTTTGGGGTGGTACACAG
TGGGCACGGAGGTCACGGAGTTGGATCTGGGCATTCAACGCCAGATGACG
AAGTTCAACTCGGCGCCTCTCTTCTTGCTCATGAATCCCAGCCCAGCTCA
AGGGTCGAAGGAGCTTCCTGTATTGATTCACGAGTCGGAGTCACACATGT
TAGACGGGAGATCACAGTCAATCTTCGTGCAGCTTCCCTTCCAGCTTGAG
ACCACCCAGGCGGAGCAGATATCAGTCGAACACGTGGCCAAGGCCACCCC
AACTGATGGCATGTCATCAATTGACCTGCACGCAGGGGCAGTGAGCACAT
CGTTGCGAACGCTGCTCGCCAGAATCGAGATCCTGCGAAGATTCCTAGAG
GAGACAAAGAACGGTAACGTGACTGTAGACTACCCTTTATTGCGGCAAAT
CTCAAGCATCTGCAACCAGCTTCCAACCATGGACGGCGCTCAGTTCTCCG
AGGAGTTTATGCGGGAATTCAACGACTCCCTGTCAGTGACATACCTGGCG
TCGGTGCAAAAGAGTGCTGGCTCAGTGAACGACCTTGCTGACAAATTCAT
GGCGGCATTTGGCCATCGACGAGCTATTTGA
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