prot_P-littoralis_Contig12.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.2.1
Unique Nameprot_P-littoralis_Contig12.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length112
Homology
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.530e-19
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 0
Query:   54 IRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRK 112
            ++LLKD+ V  +EPRV+SHLVDRMR+YT EV  DARDYADHAGR D+GM+DVRLAVR+K
Sbjct:    1 MQLLKDAGVTSYEPRVVSHLVDRMRRYTREVLIDARDYADHAGRTDLGMQDVRLAVRKK 59          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A1Y2CIS2_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CIS2_9FUNG)

HSP 1 Score: 50.1 bits (118), Expect = 1.690e-5
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   66 EPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRK 112
            +P+VL  L+D + +YTL+V  DA+ +A+HAGR ++ ++DVRLAV  K
Sbjct:   42 QPQVLPQLLDFVHRYTLDVVGDAQLFAEHAGRSEVDVDDVRLAVEGK 88          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: UPI001BB137B9 (transcription initiation factor TFIID subunit 9-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB137B9)

HSP 1 Score: 51.6 bits (122), Expect = 2.030e-5
Identity = 24/63 (38.10%), Postives = 43/63 (68.25%), Query Frame = 0
Query:   48 RDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVR 110
            RD + +  +LKD  V  +EPRV++ +++   +Y  +V  D++ Y+ HAGR DI +ED++LA++
Sbjct:   10 RDAEIMTAILKDMGVTDYEPRVINQMLEFAYRYVTDVLDDSQVYSGHAGRRDIDVEDIKLAIQ 72          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A8H7PEA1_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PEA1_MORIS)

HSP 1 Score: 51.2 bits (121), Expect = 2.310e-5
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   45 QDERDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVR 110
            Q  RD K +  LL+   V   +P+V+  L++   +YT +V QDA  YA+HAGR DI + DV+LAV+
Sbjct:   14 QQPRDAKIISLLLQSHGVHDFDPKVVHQLLEFAHRYTSDVFQDALVYAEHAGRQDIDLADVQLAVQ 79          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A7M7NJ43_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NJ43_STRPU)

HSP 1 Score: 51.2 bits (121), Expect = 2.870e-5
Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   48 RDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVR 110
            RD + +  +LKD  V  +EPRV++ +++   +Y   V  DA+ Y  HAGR D+ +ED++LA++
Sbjct:    9 RDAEIMTAILKDMGVTDYEPRVINQMLEFAYRYVTHVLDDAQVYGGHAGRRDVDVEDIKLAIQ 71          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 3.260e-5
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   44 AQDERDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVR 110
            A   RD K +  +L+   V   + +V+  L++   +YT +V QDA  Y++HAGR D+G++DVRLA++
Sbjct:    4 APQPRDAKVISLILQSLAVEDADQKVIHQLLEFAHRYTTDVFQDALLYSEHAGRTDVGLDDVRLAIQ 70          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A1S3KFZ4_LINUN (transcription initiation factor TFIID subunit 9B n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KFZ4_LINUN)

HSP 1 Score: 50.8 bits (120), Expect = 3.840e-5
Identity = 25/65 (38.46%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   48 RDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRK 112
            +D + +  +LKD  V  +EPRV++ +++   +Y  +V  DA+ YA+HAG+ +I  EDV+LA++ K
Sbjct:   10 KDAQVMASILKDMGVTDYEPRVINQMLEFTYRYVTDVLDDAKVYANHAGKKNIDTEDVKLAIQCK 74          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A6F9DTP7_9ASCI (Transcription initiation factor TFIID subunit 9B-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DTP7_9ASCI)

HSP 1 Score: 50.4 bits (119), Expect = 4.040e-5
Identity = 23/70 (32.86%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   41 TKAAQDERDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVR 110
            T  A   +D  +++ +LKD  V  +EP+V+  +++   +Y  EV  DA+ +A+HAGR  + ++D +LA++
Sbjct:   15 TMLANMPKDAHTIVAMLKDMGVTDYEPKVIHQMLELTYRYVSEVLDDAKTFANHAGRSTVTLDDTKLAIK 84          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A7J7A2V1_9COLE (Uncharacterized protein n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7A2V1_9COLE)

HSP 1 Score: 50.8 bits (120), Expect = 5.780e-5
Identity = 22/61 (36.07%), Postives = 40/61 (65.57%), Query Frame = 0
Query:   49 DEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAV 109
            +++ +I++L ++ +  +EP+V+ HL D M  Y +E+   A  Y  HAGR +I + DV+LA+
Sbjct:  389 NKQDIIKMLIEANIDCYEPQVVDHLTDYMNNYMVEILNSANAYKTHAGRNNIDISDVKLAI 449          
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Match: A0A1Y2GSY7_9FUNG (Transcription initiation factor IID, 31kD subunit-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GSY7_9FUNG)

HSP 1 Score: 50.1 bits (118), Expect = 6.700e-5
Identity = 25/63 (39.68%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   48 RDEKSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDIGMEDVRLAVR 110
            RD K +  +L+   V   E +V+  L++   +YT +V QDA  Y++HAGR ++G+EDV+LA++
Sbjct:    8 RDAKVISLILQSLSVEDTEQKVIHQLLEFAHRYTTDVFQDALLYSEHAGRTEVGLEDVKLAIQ 70          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI1.530e-1972.88Transcription initiation factor TFIID subunit n=2 ... [more]
A0A1Y2CIS2_9FUNG1.690e-548.94Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
UPI001BB137B92.030e-538.10transcription initiation factor TFIID subunit 9-li... [more]
A0A8H7PEA1_MORIS2.310e-543.94Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A7M7NJ43_STRPU2.870e-538.10Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
A0A197JZG0_9FUNG3.260e-538.81TFIID-31kDa-domain-containing protein n=1 Tax=Linn... [more]
A0A1S3KFZ4_LINUN3.840e-538.46transcription initiation factor TFIID subunit 9B n... [more]
A0A6F9DTP7_9ASCI4.040e-532.86Transcription initiation factor TFIID subunit 9B-l... [more]
A0A7J7A2V1_9COLE5.780e-536.07Uncharacterized protein n=1 Tax=Abscondita termina... [more]
A0A1Y2GSY7_9FUNG6.700e-539.68Transcription initiation factor IID, 31kD subunit-... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 46..111
e-value: 1.2E-11
score: 44.8
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 48..112
e-value: 1.8E-15
score: 58.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 48..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:6387..8249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.2.1mRNA_P-littoralis_Contig12.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 6387..8251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.2.1 ID=prot_P-littoralis_Contig12.2.1|Name=mRNA_P-littoralis_Contig12.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
QHKTHVEHVSLGSTRRERSMTSKPKKTLLSGDSLYAAEARTKAAQDERDE
KSVIRLLKDSRVALHEPRVLSHLVDRMRKYTLEVAQDARDYADHAGRLDI
GMEDVRLAVRRK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003162TFIID-31
IPR009072Histone-fold