prot_P-littoralis_Contig795.26.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig795.26.1
Unique Nameprot_P-littoralis_Contig795.26.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length109
Homology
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: D7G690_ECTSI (NOT2_3_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G690_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.030e-48
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0
Query:    1 MHLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADGNVPPNVEDIYFDHNEWQRQFFAGNVQMI 82
            MHLKNFQ+ETLFYIFYSMPQDVLQAYAAQELH REWRFQSVLKLWFKRVGPADGNVPPNVE IYFDHNEWQRQFFAGNVQMI
Sbjct:  429 MHLKNFQLETLFYIFYSMPQDVLQAYAAQELHAREWRFQSVLKLWFKRVGPADGNVPPNVEYIYFDHNEWQRQFFAGNVQMI 510          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A448Z705_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z705_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.530e-28
Identity = 51/81 (62.96%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADG--NVPPNVED-IYFDHNEWQRQFFAGNV 79
            HL+ FQ ETLFYIFY+MP+DVLQAYAAQEL+TREWR+   LKLWFKR GPADG    P N +  +YFD N W+++ F G++
Sbjct:   10 HLQQFQPETLFYIFYAMPKDVLQAYAAQELYTREWRYHGDLKLWFKRAGPADGIPAQPSNGQQYLYFDINSWEKRLFNGSM 90          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A6U3ZWB8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZWB8_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.290e-27
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADG---NVPPNVEDIYFDHNEWQRQFFAGNV 79
            HL  FQ+ETLFYIFY++P+DVLQAYAAQEL++REWR+   LKLWFKR GPADG   N    V+ IYFD N W+R+ F GN+
Sbjct:  378 HLSKFQLETLFYIFYALPKDVLQAYAAQELYSREWRYHVELKLWFKRAGPADGVANNAGSGVQYIYFDINSWERRLFNGNM 458          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A7S2YKN9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKN9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.430e-26
Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADGNVPPNVED-----IYFDHNEWQRQFFAGNV 79
            HL  FQ+ETLFYIFY++P+DVLQAY+AQEL++REWR+   LKLWFKR GP+DG    +        +YFD N W+R+ F GN+
Sbjct:   86 HLSKFQLETLFYIFYALPKDVLQAYSAQELYSREWRYHGELKLWFKRAGPSDGLAASSAASAAGQYLYFDINTWERRLFNGNM 168          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 110 bits (274), Expect = 3.050e-26
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADG---NVPPNVEDIYFDHNEWQRQFFAGNVQMI 82
            HL  FQ+ETLFYIFY++P+DVLQAYAAQEL++REWR+   LKLWFKR GP+DG         + IYFD N W+R+ F GNVQ I
Sbjct:  335 HLSKFQLETLFYIFYALPRDVLQAYAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWERRLFNGNVQTI 418          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A7R9W176_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W176_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.060e-25
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADG---NVPPNVEDIYFDHNEWQRQFFAGNVQMI 82
            HL  FQ+ETLFYIFY++P+DVLQAYAAQEL++REWR+   LKLWFKR G +DG        ++ IYFD N W+R+ F GNVQ +
Sbjct:  329 HLSKFQLETLFYIFYALPKDVLQAYAAQELYSREWRYHVDLKLWFKRGGASDGLAATANGGIQYIYFDVNTWERRLFNGNVQSV 412          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A1E7FFJ6_9STRA (NOT2_3_5-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFJ6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.210e-25
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADGNVPPNV---EDIYFDHNEWQR 72
            HL+ FQ ETLFYIFY++P+DVLQAYAAQEL+TREWR+   LKLWFKR GPADG +P +    + +YFD N W++
Sbjct:   80 HLQQFQPETLFYIFYALPKDVLQAYAAQELYTREWRYHGDLKLWFKRAGPADG-IPASSAAQQYLYFDINSWEK 152          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A6V0BF73_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BF73_9STRA)

HSP 1 Score: 106 bits (265), Expect = 8.810e-25
Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADGNVPPNV----EDIYFDHNEWQRQFFAGNV 79
            HL+ FQ ETLFYIFY+MP+DVLQAYAAQEL+TREWR+   LKLWFKR GPADG +P       + +YFD N W+++ F G++
Sbjct:  392 HLQQFQPETLFYIFYAMPKDVLQAYAAQELYTREWRYHGDLKLWFKRAGPADG-IPAQSSAGQQYLYFDINSWEKRLFNGSM 472          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A7S1VTU9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VTU9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.080e-24
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADGNVPPNVED---IYFDHNEWQRQFFAGNVQMIAS 84
            HL  FQ+ETLFYIF+++P+DVLQAY+AQEL+TREWR+ + LK WFK+  PADG +P        +YFD N W+R+ F GN   I S
Sbjct:  344 HLSKFQLETLFYIFHALPKDVLQAYSAQELYTREWRYHAQLKRWFKQATPADG-IPAQTSSPQLLYFDMNSWERRIFTGNAADITS 428          
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.780e-24
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    2 HLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVGPADGNVPPNVEDIYFDHNEWQRQFFAGNV 79
            HL  FQ+ETLFYIFY++P+DVLQAYAAQEL++R+WR+   LKLWFKR  P D       + IYFD N W+R+ F G++
Sbjct:  222 HLSKFQLETLFYIFYALPKDVLQAYAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQYIYFDINSWERRIFNGSM 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig795.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G690_ECTSI1.030e-4896.34NOT2_3_5 domain-containing protein n=2 Tax=Ectocar... [more]
A0A448Z705_9STRA3.530e-2862.96NOT2_3_5 domain-containing protein n=1 Tax=Pseudo-... [more]
A0A6U3ZWB8_9STRA3.290e-2764.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2YKN9_9STRA2.430e-2656.63Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2EBZ5_TRICV3.050e-2661.90Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9W176_9STRA2.060e-2559.52Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1E7FFJ6_9STRA4.210e-2563.51NOT2_3_5-domain-containing protein (Fragment) n=1 ... [more]
A0A6V0BF73_9STRA8.810e-2560.98Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1VTU9_9STRA6.080e-2455.81Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0C8Q4_9STRA7.780e-2457.69Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 1..88
e-value: 9.0E-22
score: 79.4
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 3..72
e-value: 7.5E-19
score: 68.1
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 2..72
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 2..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig795contigP-littoralis_Contig795:90259..91286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig795.26.1mRNA_P-littoralis_Contig795.26.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig795 90259..91381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig795.26.1 ID=prot_P-littoralis_Contig795.26.1|Name=mRNA_P-littoralis_Contig795.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=109bp
MHLKNFQVETLFYIFYSMPQDVLQAYAAQELHTREWRFQSVLKLWFKRVG
PADGNVPPNVEDIYFDHNEWQRQFFAGNVQMIASREPKPVLGTLAPQLGF
VVCEAGVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR007282NOT2/3/5_C
IPR040168Not2/3/5