mRNA_P-littoralis_Contig791.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: A0A6H5JJK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK7_9PHAE) HSP 1 Score: 163 bits (413), Expect = 4.210e-41 Identity = 93/220 (42.27%), Postives = 135/220 (61.36%), Query Frame = 1
Query: 1 MNTPSRLFERITTYSRALRYV----DGYKNHVSSYEEVMRLMDPKKATVHKNTNLSLAAVEYLLRGFADRNTSVRKIEIVMYIAVLKAQDSDG----LAKEVYDRFRYLDDFDRGAMTKIFNLSTCNDRTKLLLDKIMVL--KTKKIHPAIEHEFQVEFISLFFDAMESIVSREQPLTNLEYVDKATPSQMEGARGVIEKHTSSIATKFGSCFNVKNIQE 630
M PS L +RI T + A+R+V DGY + SYEEV++ + +KAT + NTNL AAVEYL + FA +TS RKI I +Y+A+ D D LAKE RF+ ++++D+ MTKIFN+S CNDR LLD + K K + I+HEF+VEF+ L+F+ ++S+V R Q LT+ Y + T +E A + H SSIA K+ CF ++ +++
Sbjct: 1 MTPPSELSKRIGTCADAVRFVLRGKDGYPSSQESYEEVIQYLPAEKATGYTNTNLVKAAVEYLKKSFATSDTSDRKISIALYVAIYVGHDHDHDDGVLAKEFCKRFQDVENYDKHMMTKIFNMSLCNDRILALLDAVTSSGKKKKDVIALIDHEFRVEFVLLYFNVVKSLVLRGQSLTDFGYPAELTADDVEAAEKTFDNHVSSIANKYWPCFKMEALKK 220
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: A0A6H5KVG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG0_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.460e-35 Identity = 84/214 (39.25%), Postives = 128/214 (59.81%), Query Frame = 1
Query: 7 TPSRLFERITTYSRALRYVDGYKNHV--SSYEEVMRLMDPKKATVHKNTNLSLAAVEYLLRGFADRNTSVRKIEIVMYIAVLKA--QDSDGLAKEVYDRFRYLDDFDRGAMTKIFNLSTCNDRTKLLLDKIMVLKTKKIHPAIEHEFQVEFISLFFDAMESIVSREQ--PLTNLEYVDKATPSQMEGARGVIEKHTSSIATKFGSCFNVKNIQE 630
T S+LF I+ S A+RY+ +K +SY+ VM+ + + T H +TNL+ A +E++ D++TS RK+ + + +AV A + GLAKE+ DR R ++DF+R MT++FNLS DR LLD +++ + K + I+ E VEF+ LFF +ESI+ R + L Y ATPS M AR ++EKH S+IA G CF +K ++E
Sbjct: 2 TTSKLFITISICSEAIRYLRAHKQEEWKTSYDHVMQSLPAEDKTEHVHTNLTKACMEFMKAEVFDKDTSDRKVMVAIRVAVSIAIGEAQRGLAKEICDRLRKVEDFNRYLMTEVFNLSIVTDRVCTLLDDVIIHQKKHVSKDIQQELCVEFVVLFFGIVESILRRGHCHTFSELGYATSATPSDMGNARNILEKHVSAIAAMCGPCFILKALKE 215
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: Q8QND1_ESV1K (EsV-1-151 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QND1_ESV1K) HSP 1 Score: 131 bits (330), Expect = 1.110e-30 Identity = 87/218 (39.91%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 1 MNTPSRLFERITTYSRALRYVDG-----YKNHVSSYEEVMRLMDPKKATVHKNTNLSLAAVEYLLRGFADR--NTSVRKIEIVMYIAVLKAQD---SDGLAKEVYDRFRYLDDFDRGAMTKIFNLSTCNDRTKLLLDKIMVLKTKK-IHPAIEHEFQVEFISLFFDAMESIVSREQPLTNLEYVDK-ATPSQMEGARGVIEKHTSSIATKFGSCFNVK 618
M TP++LFERITT S ALR+ G ++H +SY V+ L+ AA +L GF N S RK+EI M +A A+ DGL K + DRFR L+DFDR M K+F+LS C+D LLD IMV K KK + +E E Q EF+ +FFD + +I+ R + ++L YV AT M AR +E+H + IA + +CF ++
Sbjct: 1 MTTPTKLFERITTCSLALRHGRGDGGEHREHHEASYRRVLGS--------RPEAQLAKAAKSFLRSGFPSGGGNVSDRKVEIAMCVATSIAEGRDREDGLVKAICDRFRGLEDFDRRVMKKVFSLSLCSDSVLTLLDNIMVSKRKKGVLREVERELQAEFVLMFFDILANILKRGESSSDLGYVVAGATAEDMGNARATLERHAAVIADRCCACFRLE 210
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: A0A6H5JFF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF2_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.660e-25 Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 103 MRLMDPKKATVHKNTNLSLAAVEYLLRGFADRN-TSVRKIEIVMYIAVLKAQD--SDGLAKEVYDRFRYLDDFDRGAMTKIFNLSTCNDRTKLLLDKIMVLKTKKIHPAIEHEFQVEFISLFFDAMESIVSREQPLTN---------LEYVDKATPSQMEGARGVIEKHTSSIATKFGSCFNVKNIQEA 633
M+ + + T H +TNL+ A +E++ D++ S RK I +A+ A D GLAKE+ DR R ++D +R M ++FNLS DR +LLD +++ + K + I+HE VEF+ LFF +ESI+ R N LEY ATPS M AR ++EKH S+IA G CF +K ++++
Sbjct: 1 MQSLPAEDKTEHAHTNLTKACMEFMKAEVFDKDPASDRKARIAFCVAMSIATDRAQTGLAKEICDRLRKVEDLNRHLMVEVFNLSIVTDRVCILLDDVIIHR-KHVSKDIQHELCVEFVLLFFGIVESILRRGHHHGNNNHDFAFGELEYATSATPSDMTNARDILEKHASAIAAMCGPCFKLKALKKS 188
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: A0A6H5JWP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.120e-15 Identity = 42/105 (40.00%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 217 IEIVMYIAVLKAQDSDGLAKEVYDRFRYLDDFDRGAMTKIFNLSTCNDRTKLLLDKIMVLKTKKIHPAIEHEFQVEFISLFFDAMESIVSREQPLTNLEYVDKAT 531
+ +++ ++ + GL KE+ DRFR L DFDR MT++F+LS NDR ++LL+ +V + K I I HEF VEF+ LFF +E++V + L + ++D AT
Sbjct: 3 VAVIVATSMATGEAERGLDKEICDRFRRLQDFDRKVMTELFHLSIVNDRVRVLLEDALVRRKKTIGIDIRHEFSVEFVLLFFGVVENVVRTGRRLGDQGHIDIAT 107
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: Q8QNC8_ESV1K (EsV-1-154 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC8_ESV1K) HSP 1 Score: 87.4 bits (215), Expect = 2.850e-15 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 2
Query: 623 FKKPRAQNSLFPARGGLPRVSIGCELVKFD----------EATVDTLKASLSETNERYEFLETMYAAMMHSSN--EPGVTYRALKLQTFKEFYLETILDREQKEQ 901
+ PR N+LFPA G P+VSIGC+ V+F + T+D LK SL + +E+ EFLE M+AA+ H+SN +P VTYR L+L++ K F+LE +LD+ Q E+
Sbjct: 218 LRLPRKNNNLFPAGDGFPQVSIGCDPVRFGGVTEDKLENAKNTIDLLKESLMDKDEKGEFLEMMFAAISHASNPRDPVVTYRRLQLESVKHFFLEKMLDKAQAEE 322
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Match: D8LPH6_ECTSI (EsV-1-154 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPH6_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 7.460e-14 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 2
Query: 623 FKKPRAQNSLFPARGGLPRVSIGCELVKFD----------EATVDTLKASLSETNERYEFLETMYAAMMHSSN--EPGVTYRALKLQTFKEFYLETILDREQKEQ 901
+ PR N+LFPA G P VSIGC+ V+F + T+D LK SL + +E+ EFL+ M+A + H+SN +P VTYR L+L + ++F+LE +LD+ Q E+
Sbjct: 218 LRLPRKNNNLFPAGDGFPNVSIGCQPVQFGGVTEDKLENVKNTIDLLKESLMDKDEKEEFLQMMFAIISHASNPRDPVVTYRRLRLASARDFFLEKVLDKTQAEE 322 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig791.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig791.4.1 >prot_P-littoralis_Contig791.4.1 ID=prot_P-littoralis_Contig791.4.1|Name=mRNA_P-littoralis_Contig791.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp MNTPSRLFERITTYSRALRYVDGYKNHVSSYEEVMRLMDPKKATVHKNTNback to top mRNA from alignment at P-littoralis_Contig791:7484..8573+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig791.4.1 ID=mRNA_P-littoralis_Contig791.4.1|Name=mRNA_P-littoralis_Contig791.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1090bp|location=Sequence derived from alignment at P-littoralis_Contig791:7484..8573+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig791:7484..8573+ >mRNA_P-littoralis_Contig791.4.1 ID=mRNA_P-littoralis_Contig791.4.1|Name=mRNA_P-littoralis_Contig791.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig791:7484..8573+ (Pylaiella littoralis U1_48)back to top |