mRNA_P-littoralis_Contig789.25.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig789.25.3
Unique NamemRNA_P-littoralis_Contig789.25.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 503 bits (1294), Expect = 6.740e-163
Identity = 254/338 (75.15%), Postives = 288/338 (85.21%), Query Frame = 1
Query:   16 VDVMGDLPAAELEEFQFLKVAGLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVIPLPELTGSAASLAKMQGVQVPHVPVSS 1023
            +DV  D  +AE+EE  FLKVAGLVVKLD FHAMQR+SKLILKSHGAC AYLARLRDAFF +NAEDLAAVEAAL QAGMS++EV+ KK KDW YFLKRCRR++P PAEL++RFDLVN +YGGL+ KKTK+PLFRAEALEA+KRLRVHI+ DCCSD+P++AL+FEAGKD+E L  L  C R    LEGYHLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFY QPMLEAI+R+TSKLYG AKY  WLPTSAY DTGER GFVRSIF SN  GGG   + EILGG +N G++P    E +PLPELTGSAA LAKMQGVQVPH+PV+S
Sbjct:  680 LDVTADTSSAEVEELLFLKVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEILGGAENSGIDPAFADEAVPLPELTGSAARLAKMQGVQVPHMPVTS 1017          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 5.850e-154
Identity = 239/341 (70.09%), Postives = 278/341 (81.52%), Query Frame = 1
Query:   13 IVDVMGDLPAAELEEFQFLKVAGLVVKLDAFH--AMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVIPLPELTGSAASLAKMQGVQVPHVPVSS 1023
            ++DV  D+ +AE+EE  FLK+  L  +  A    A   +SKLILKSHGAC AYLARLRD FF +NAEDLAAVEAAL QAGMS++EV+ KK KDW  FLKRCRR++P PAEL+KRFD+VN +YGGL+ KKTK+PLFRAEALEA+KRLRVHI+ DCCSDAP++AL+FEAGKD+E L  L  C R    LEG+HLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFY QP+LEAI+R+TSKLYG AKY  WLPTSAY DTGER GFVRSIF S  GGGG   + EILGG +N  ++P S  E +PLPELTGSAA LAKMQGVQVPH+PV+S
Sbjct:  279 LLDVTADMSSAEVEELLFLKLKALDQRNYALLRLAAGEVSKLILKSHGACRAYLARLRDEFFKVNAEDLAAVEAALRQAGMSKEEVEAKKGKDWVLFLKRCRRLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPILEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSEVGGGGTDSVLEILGGAENSSMDPASVEEAVPLPELTGSAARLAKMQGVQVPHMPVTS 619          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.400e-112
Identity = 176/239 (73.64%), Postives = 202/239 (84.52%), Query Frame = 1
Query:  313 RMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVIPLPELTGSAASLAKMQGVQVPHVPVSS 1023
            R++P PAEL++RFDLVN +YGGL+ KKTK+PLFRAEALEA+KRLRVHI+ DCCSD+P++AL+FEAGKD+E L  L  C R    LEGYHLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFY QPMLEAI+R+TSKLYG AKY  WLPTSAY DTGER GFVRSIF SN  GGG   + EILGG +N G++P    E +PLPELTGSAA LAKMQGVQVPH+PV+S
Sbjct:  206 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEILGGAENSGIDPAFADEAVPLPELTGSAARLAKMQGVQVPHMPVTS 444          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.220e-57
Identity = 127/320 (39.69%), Postives = 187/320 (58.44%), Query Frame = 1
Query:   76 AGLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDL---AAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*-ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAK-YPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVIPLPELTGSAASLAKMQGVQVPHVPV 1017
            + L V+LD FHA+QR+SKL  KSHGA   ++ARLRDA F +N +D+   +AVE AL   GM+ + V   K K+W +F++ CRR++P    L++RF+LV + +  +V  K+ + L R  A +AV+ LR HI   C SD     L++ +GK+S       C R     EGYH ++R LL  +C SP LAH +LLE NYRWN+R ++ NRGL   VG F+ Q  +E I+R T+  Y ++  +P+W+     ADTGE+ G   S++    GG   +   +++   D  GL        +P+P+LT SA   A+M    +P  PV
Sbjct:  174 SALKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDVPSEPSDLV---DEQGLAQ----NAVPMPKLTHSAKKYAQMMHAGMPVTPV 486          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG)

HSP 1 Score: 212 bits (540), Expect = 1.830e-57
Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 1
Query:   82 LVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*-ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDW 783
            L V+LD FHAM R++K +LKSHGA   ++ARLRDAFF I+ +DL  V AAL  AG+S DE++ KK  DWA+FLK C R++P   EL+KR+D V   +  ++  KT +PLFR+   + V+ LR HI   C SD PD  L+F  G+ S+   +  C+R   + EGYH HMR LL  +  SP L HLLLLE N+RWN+R ++ NRGL    GGFY Q +L+ I R +S L  +  Y  W
Sbjct:  433 LKVRLDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQGLPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGFYSQSLLDEINRNSSGLSVHVPYLAW 668          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 5.370e-53
Identity = 124/327 (37.92%), Postives = 187/327 (57.19%), Query Frame = 1
Query:   76 AGLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDL---AAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAK-YPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVIPLPELTGSAASLAKMQGVQVPHVPVSSQLKLRS 1041
            + L V+LD FHA+QR+SKL  KSHGA   ++ARLRDA F +N +D+   +AVE AL   GM+ + V   K K+W +F++ CRR++P    L++RF+LV + +  +V  K+ + L R  A +AV+ LR HI   C SD     L++   K + +            EGYH ++R LL  +C SP LAH +LLE NYRWN+R ++ NRGL   VG F+ Q  +E I+R T+  Y ++  +P+W+     ADTGE+ G   S++    GG   +   +++   D  GL        +P+P+LT SA   A+M    +P  PV +  + R+
Sbjct:  174 SALKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYT--KSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDVPSEPSDLV---DEQGLAQ----NAVPMPKLTHSAKKYAQMMHAGMPVTPVHTGAEKRN 491          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.890e-50
Identity = 125/330 (37.88%), Postives = 179/330 (54.24%), Query Frame = 1
Query:   88 VKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDL-------------AAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKL-YGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVI----PLPELTGSAASLAKMQGVQVPHVPV 1017
            V+LD FH + R+S++  KSHGA   ++ARLRDA F +N +D+              +VE  L   GM  +EV     ++W++FL+  RR++P    L+KRFD V + +GG V   + + L R +A++AV++LR HI  DC SD    A++F  GK+   L D         +EGYH ++R LL ++C SP LA  +LLE NYRWNLR  I NRGL  A+GG Y Q ++E+I+R T+     +  +P+W       DTGER G  RS++     G       E+ G  DN       G   +    P+ +LT SA   AKM G  +P   V
Sbjct:  488 VRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSLWGGERDG-------EVWGIADNDAFCTDDGDSDVNGRTPMSDLTLSAKMYAKMMGESMPETRV 810          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.970e-47
Identity = 99/222 (44.59%), Postives = 143/222 (64.41%), Query Frame = 1
Query:   88 VKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*A-LEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVT 747
            V+LD FHA+ RLS+ I K HGA    +ARLRDA F +N +D+  +E  L + GMS  +V   K +DW+YFL++CRR++PPP+EL+KRFD V + +G  V   +K+ L R ++++AV  LR HIV  C SD    A+++  GK ++      C R    +EGYH ++R LL ++C SP LA  +LLE N+RWNL+  + NRGL   +G  Y Q ++E I+R T
Sbjct:  545 VRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRAT 766          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 8.200e-41
Identity = 97/255 (38.04%), Postives = 140/255 (54.90%), Query Frame = 1
Query:   79 GLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*ALEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLY-GNAKYPDWLPTSAYADTGERCGFVRSI 840
             L V+LD FHA+QR+S+L  KSHGA   ++ARLRDA F +N +D+  VE AL   GM+ + V   K K+W YFL+ CRR++P    L++RF+ V   +  +V  K+ + L R +A++AV +LR HI  DC SD     L++  G+++       C R      Y                      E NYRWN+R ++ NRGL   VG F+ Q  +E I+R TS  Y  N  +P+W+     ADTGE+ G  +S+
Sbjct:  497 ALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNAAGITTRRCVRG---TNYT---------------------EFNYRWNIRMAVKNRGLPREVGEFFDQFEIEIIQRETSSWYPDNPLFPEWISALDAADTGEKSGLSQSL 727          
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 5.590e-27
Identity = 79/220 (35.91%), Postives = 118/220 (53.64%), Query Frame = 1
Query:  367 IYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*-ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLY-GNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGEVIPLPELTGSAASLAKMQGVQVPHVPV 1017
            ++G +V  K+ + L R++A++ V  L  HI   C SD     L++  G+++       C R     EGYH ++R LL ++C SP LAH +LLE N+RWN+R ++ NRGL   VG F+ Q   E I+R T+  Y  N  +P+W+     ADTGER G  +S++      GG AP + +         E  S    IP+P+LT SA   A+   + +P  PV
Sbjct:    1 MFGNVVDAKSGEKLLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNAAGITTHRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPDNPLFPEWVSALDVADTGERSGLSQSMWGP--ASGGDAPGDLVD--------EQASPQHAIPMPKLTHSAKKYAETMNIGMPCTPV 210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig789.25.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE6.740e-16375.153'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KEU8_9PHAE5.850e-15470.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD89_9PHAE1.400e-11273.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPK9_9PHAE1.220e-5739.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Y2A9B5_9FUNG1.830e-5748.313'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KLP1_9PHAE5.370e-5337.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRJ6_9PHAE1.890e-5037.883'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI1.970e-4744.593'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV1_ECTSI8.200e-4138.04Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
A0A6H5K9U3_9PHAE5.590e-2735.91Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig789contigP-littoralis_Contig789:91609..93781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G3Q9
Preferred nameWRN
PFAMsDEAD,DNA_pol_A_exo1,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
Model size1495
Max annot lvl2759|Eukaryota
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
Exons5
Evalue1.03e-33
EggNOG OGsKOG4373@1|root,KOG4373@2759|Eukaryota
EC3.1.11.1,3.6.4.12
Description3'-5' exonuclease activity
Cds size531
COG categoryC
BRITEko00000,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig789.25.3prot_P-littoralis_Contig789.25.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig789 92859..93757 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791614.5273004-UTR-P-littoralis_Contig789:91608..918861680791614.5273004-UTR-P-littoralis_Contig789:91608..91886Pylaiella littoralis U1_48UTRP-littoralis_Contig789 91609..91886 -
1680791614.5437376-UTR-P-littoralis_Contig789:92028..925071680791614.5437376-UTR-P-littoralis_Contig789:92028..92507Pylaiella littoralis U1_48UTRP-littoralis_Contig789 92029..92507 -
1680791614.554291-UTR-P-littoralis_Contig789:92675..928581680791614.554291-UTR-P-littoralis_Contig789:92675..92858Pylaiella littoralis U1_48UTRP-littoralis_Contig789 92676..92858 -
1680791614.6031413-UTR-P-littoralis_Contig789:93757..937811680791614.6031413-UTR-P-littoralis_Contig789:93757..93781Pylaiella littoralis U1_48UTRP-littoralis_Contig789 93758..93781 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791614.5672805-CDS-P-littoralis_Contig789:92858..930991680791614.5672805-CDS-P-littoralis_Contig789:92858..93099Pylaiella littoralis U1_48CDSP-littoralis_Contig789 92859..93099 -
1680791614.5784483-CDS-P-littoralis_Contig789:93257..934991680791614.5784483-CDS-P-littoralis_Contig789:93257..93499Pylaiella littoralis U1_48CDSP-littoralis_Contig789 93258..93499 -
1680791614.5885348-CDS-P-littoralis_Contig789:93709..937571680791614.5885348-CDS-P-littoralis_Contig789:93709..93757Pylaiella littoralis U1_48CDSP-littoralis_Contig789 93710..93757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig789.25.3

>prot_P-littoralis_Contig789.25.3 ID=prot_P-littoralis_Contig789.25.3|Name=mRNA_P-littoralis_Contig789.25.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MGDLPAAELEEFQFLKVAGLVVKLDAFHAMQRLSKLILKSHGACGAYLAR
LRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLP
PPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCS
DAPDQALHFEAGKDSELYDLSLCSRH*
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mRNA from alignment at P-littoralis_Contig789:91609..93781-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig789.25.3 ID=mRNA_P-littoralis_Contig789.25.3|Name=mRNA_P-littoralis_Contig789.25.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=2173bp|location=Sequence derived from alignment at P-littoralis_Contig789:91609..93781- (Pylaiella littoralis U1_48)
GACAAGGCAGAGATTGTTGACGTGATGGGAGACTTGCCTGCCGCAGAGCT TGAAGAGTTTCAATTTCTCAAGGTGCGAACCATAACGATAAACTGTTGAA CCTATATTTTTGTTTTCAAGTCTAAGAAGTTCATGTGTTTGACAACATGC ATGCCCTAGGTTCGGTGAAATATTGTATTGTACAACGATGTGTTTTTTTT TCCAGGTTGCTGGGCTCGTTGTGCGTTCTCTATCTAAGTTCGGTGAAGGT AGTGTTTTTGACAACACCCTTTTTTTTTTCAGGTTGCTGGGCTCGTTGTG AAGCTTGATGCTTTCCATGCAATGCAGCGGCTAAGCAAGCTCATCCTCAA GAGCCACGGCGCGTGCGGTGCGTACTTAGCACGGTTGAGAGATGCCTTTT TCACGATAAACGCAGAAGATCTCGCTGCCGTGGAAGCGGCGCTATTGCAG GCGGGGATGAGCCAAGATGAGGTAGACATCAAGAAGACGAAGGACTGGGC TTACTTCCTCAAACGGTGCCGAAGGTGACCCATTTGTTCCCTAGCAATGA ATCTGTAATTTGTTCTGGCAGTACTCACCGTATTCACCACAGCATGTGAA AGGAAAACTGAATGTCCGAGCACGTTGTCCCTCGCGGATGCACTGCTGTC TTGCTCTTCCCTCTCGCTTTTGCGGTCGGCAGGATGCTCCCGCCACCAGC AGAGCTTGTCAAGCGCTTTGACTTAGTGAACAAGATTTATGGTGGGCTTG TTGGCAAGAAGACGAAGAAGCCCCTGTTTCGGGCGGAGGCGCTGGAGGCC GTCAAGCGTCTCCGAGTACACATCGTGGAAGATTGCTGTAGTGACGCCCC GGACCAAGCGCTACACTTTGAGGCGGGCAAGGATTCAGAGTTGTACGATT TATCACTGTGTTCGAGGCACTAAGCCCTAGAGGGGTACCACTTGCACATG CGTTTGTTGGTCGCATGGTGTTTGTCGCCCAGGCTGGCTCACCTCCTGCT TCTTGAGCACAACTACAGGTGGAACCTACGCCAGAGCATCAACAACCGCG GACTTGGCGAGGCTGTGGGGGGATTCTACTACCAACCAATGCTCGAGGCC ATTGAGGTATGCCACCACCCAAGCCGCTGTTGTTCCCACGATCGCGCATG CTGACCCAAGCTCACATTTAGTTGAAGGTCTAGATAGAAAGGTGCTTGAT TTCAATATGCACCAAAGCGAGCTCTTCCCCTCACCATATTTCCGCATGTT TCACCTGTATTTTCTTTTAAACAGAGAGTGACTTCAAAGCTGTACGGCAA CGCGAAGTACCCTGACTGGCTACCGACAAGCGCGTACGCGGACACAGGGG AGCGCTGTGGATTTGTTCGGAGTATTTTTGCGTCGAACGGAGGTGGGGGA GGGATCGCCCCGATGGAGGAAATCCTTGGAGGGGAAGACAACTGCGGATT GGAACCCCCCTCAGGGGGAGAGGTAATCCCGCTTCCCGAGTTAACGGGGT CGGCTGCCTCCCTTGCAAAGATGCAGGGAGTGCAAGTACCGCACGTGCCA GTTTCCAGTCAGCTGAAATTAAGAAGTTCAATCGTACGTGGATGAAGTTT GTGGACCCGTCGCGGAAGACGTCGGTGGTAGACTTTGACCGCTTTGCGTG GGAATGGAACAAGACCGTGTCGGTCATGGAGGAGGAGGACGCCGCCACCA TCATCCCTATTTTTATGAAGACGGCTGTACAACTAAAGTCATACTGGAAT GAGTGAGTGTAACATGCTTCGTTTATTTTTGCATATAATCCAGTTCGGTA GTAGAATTACCATCAGCTGTTCGTTAGTTCCTAGCGGACCAGCGTACCAA GCGTAAAGCCTTGCTTAATAATTCTCAACTTTGCTGACACGTCCCCTCCA TGCCCGTGTATCGTAAGGGATACGATGCGACCTGTCCGCCTACAAGAAGG TCCCGTTAGGAACCACCTCCGACTTCCGGACGATGTCGGGGGTGCTGCAA CCGCCGTGGCGCAGCCTTGGGTGTTGCAGCCGCCGGATGGCTTCGAATTC CCTACACAACTGCCGGCCCTCCCGGCGGCTGGGGAGCAGGGGGGGTCATC AGCTGGTGCTGCGGCTGCAGGTTCTGGAGATCAGGGGGCGTCAGCGGGTA GTGGTGCTGTCACCGGTGCGCCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig789:91609..93781-

>mRNA_P-littoralis_Contig789.25.3 ID=mRNA_P-littoralis_Contig789.25.3|Name=mRNA_P-littoralis_Contig789.25.3|organism=Pylaiella littoralis U1_48|type=CDS|length=531bp|location=Sequence derived from alignment at P-littoralis_Contig789:91609..93781- (Pylaiella littoralis U1_48)
ATGGGAGACTTGCCTGCCGCAGAGCTTGAAGAGTTTCAATTTCTCAAGGT
TGCTGGGCTCGTTGTGAAGCTTGATGCTTTCCATGCAATGCAGCGGCTAA
GCAAGCTCATCCTCAAGAGCCACGGCGCGTGCGGTGCGTACTTAGCACGG
TTGAGAGATGCCTTTTTCACGATAAACGCAGAAGATCTCGCTGCCGTGGA
AGCGGCGCTATTGCAGGCGGGGATGAGCCAAGATGAGGTAGACATCAAGA
AGACGAAGGACTGGGCTTACTTCCTCAAACGGTGCCGAAGGATGCTCCCG
CCACCAGCAGAGCTTGTCAAGCGCTTTGACTTAGTGAACAAGATTTATGG
TGGGCTTGTTGGCAAGAAGACGAAGAAGCCCCTGTTTCGGGCGGAGGCGC
TGGAGGCCGTCAAGCGTCTCCGAGTACACATCGTGGAAGATTGCTGTAGT
GACGCCCCGGACCAAGCGCTACACTTTGAGGCGGGCAAGGATTCAGAGTT
GTACGATTTATCACTGTGTTCGAGGCACTAA
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