mRNA_P-littoralis_Contig783.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 3.140e-134 Identity = 197/267 (73.78%), Postives = 218/267 (81.65%), Query Frame = 1
Query: 1 LEYGKDAVRRWFVELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARPDPAHNFDGKIGIRRICVIKTAQRASER-------------------RKRG----EEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELV 732
LE+GKD VRRWF +LGAAK A RIKPSLSDAQKR R+DFI D+VDE GEYLDQGN+VH+DESWFYLMREKE VRVF GE+V G PRV H+SHLPKIMVIVANARPDPAH+FDGKIGI RICVI+TAQR+S++ R R EEYEFDCTIDAEWYKDWYIDVLLP I +KMPW RSKRVVVQQDGASPHTG+GNPEILNSAG+ GWLVELVTQPAQSPD N+NDLG FASLK RVW +NA +++ELV
Sbjct: 98 LEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A8J2WWN0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWN0_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.710e-41 Identity = 100/279 (35.84%), Postives = 151/279 (54.12%), Query Frame = 1
Query: 13 KDAVRRWFVELGAAKVARRIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNMVHVDESWFYLMREKENVRVFP---GEEVLGAPR-VQHKSHLPKIMVIVANARPDPAHNFDGKIGIRRICVIKTAQRASERR---KRGEEYEFDCTIDAEWYKDWYI--DVLLPEINKKMPW*RS--------KRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSL 798
++++RRW LGA K + IKP L K +R+ + D++D G D + VHVDE WF+ M + RVFP G L PR + HKS PK+M +VA ARP P +NFDGKIGI +++ A+R+ + K + T+DA+ Y+ + ++ I +KM W + + + +Q DGA PHT + N E+ G +L+ + QPAQSPD N++D+ FF SL+S ++ + EL + + + YEEY E LE W+ L
Sbjct: 172 EESMRRWCKALGAKKHRQYIKPLLRLRHKVQRLKWALDEIDGN-GMLSDHKDTVHVDEKWFFQMDDGAVCRVFPDAHGNYTLPPPRRLYHKSRTPKLMFLVAVARPRPEYNFDGKIGIWHFAIVRKAKRSHKATGTVKGVTDIMETYTVDAKVYRKVITGKEGVMEAIREKMWWYKKGSGKPEAGQEIWLQHDGARPHTAKANEEVFEQKGQEEDFLITVCEQPAQSPDTNMDDIAFFNSLQSDTSCVSTSNLFELRDAVNKCYEEYPAERLEACWRVL 449
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.880e-37 Identity = 83/258 (32.17%), Postives = 144/258 (55.81%), Query Frame = 1
Query: 67 RIKPSLSDAQKRRRIDFICDQVDETTGE-----YLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARPD-PAHN---FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQ 813
R+KP L+D K R+ F+ Q TG + D + VH+DE WFY+ ++ ++ +E + + + K H+ K+M + A ARP A N +DG+IG+ + A R+S+ RKRG++ T+ + Y+ + ID ++P + K P + ++ +QQD A PH +P ++ +AG GW + L +QPAQSPD NV DLG+F +++S M +++LV + + +EE + L++ + +L KV++
Sbjct: 7 RLKPMLTDKHKSDRMAFV--QRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVME 260
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.410e-36 Identity = 90/261 (34.48%), Postives = 146/261 (55.94%), Query Frame = 1
Query: 70 IKPSLSDAQKRRRI----DFICDQVDETTG------EYLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARPDPAHN----FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVL 810
+ PSL+DA K +R+ F+ ++ +TT ++ + +H+DE WF+L ++K + GEE L + +HKSH+PK+M + A RP H FDGK+GI + TA+R+S + +G T+ + Y D ++ +LP I K P R K + +QQDGA PH +G PE++ SA G ++LVTQPA SPD N+ DLGFFA++++ + ++E ++ + E + E + L+ VW SL + +
Sbjct: 111 LSPSLTDACKYKRLLHCLSFL--RLSKTTRSCPAAFKFHAMLDWIHLDEKWFFLDKDKRTFYLVKGEE-LPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPS-RWKTLYIQQDGARPHCTDGCPELVASAAS-FGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRM 366
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.650e-34 Identity = 84/263 (31.94%), Postives = 138/263 (52.47%), Query Frame = 1
Query: 67 RIKPSLSDAQKRRRIDFICDQVDETTGEYL---DQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARPDPAHN----FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQPNTP*GG 834
R+KP ++D K R++F+ V +T + D + VH+DE WFYL ++ E+V + K H+ K+M + A ARP + +DGKIG+ + AQR S+ R+RG T+ + Y+++ ++ ++P I K P RS + +QQD A PH E + + AG GW ++LV QPA SPDFNV DLGFF S+++ +++LV + +++ D L++ + +L +V+ GG
Sbjct: 132 RLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDEDV-PVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHV-EVDDAAVTLAGHSDGWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGG 392
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.740e-34 Identity = 83/256 (32.42%), Postives = 139/256 (54.30%), Query Frame = 1
Query: 67 RIKPSLSDAQKRRRIDFICDQV-DETTG--EYLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARP--DPAHN--FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQ 813
R++P L+ + R +F + D G ++ D + VH+DE WFY+ + ++ +E + Q K H+ K+M + A ARP D AH +DGK+G+ + A+R S+ R RG T+ Y+ + +D ++P I + P R + VQQD A PH +PE+L +AG GW ++L+ QPAQSPDFNV DLGFF +++S A +++L++ + + +E L++ + +L KV++
Sbjct: 132 RLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLW-HDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVME 385
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.720e-34 Identity = 88/254 (34.65%), Postives = 134/254 (52.76%), Query Frame = 1
Query: 73 KPSLSDAQKRRRIDFICDQVDETTGEYLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKS--HLPKIMVIVANARPDPAHN----FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSK-RVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQ 813
KP L+ K +R+++I + +D+ G + D +H+DE WFYL R K+ + PGE P+ KS H+ K+M + A ARP N FDGKIGI V + A+R+S R +G +D E YK ++ +LP I +K P S + +Q+D A PH E+ +A GW + + TQP SPD NV DLGFF S++S + + ++ L+ + E ++E ETL V+ SL ++
Sbjct: 234 KPLLTAKNKLKRVEWILEHIDDN-GRFDDWFKWIHIDEKWFYLKRTKQTTYLLPGE---AEPKSTSKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEV-KAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACME 482
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A0N7L738_PLAHL (Predicted methyltransferase n=4 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L738_PLAHL) HSP 1 Score: 140 bits (354), Expect = 1.010e-33 Identity = 96/257 (37.35%), Postives = 140/257 (54.47%), Query Frame = 1
Query: 67 RIKPSLSDAQKRRRIDFICDQVDETTGEYLDQGNM---VHVDESWFYLMREKENVRVFPGE-EVLGAPRVQHKSHLPKIMVIVANARPD-PAHN---FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQ 813
R KP L+D Q+ R+ F V G + +M VH+DE WFYL +K GE E V++K+++ K+M + A ARP A N +DGKIG+ V + A+R+S+ R G T+D + Y+ +++P I K W KRVV+QQD A PH +PE+ ++ G GW ++L QPA SPDFN NDLGFFASL+S M A +E+LV + + + + L++V+ +L VLQ
Sbjct: 450 RAKPMLTDKQRIDRVKFAASFVQRGPGVCIRFDSMMEYVHLDEKWFYL--KKXXXXXXXGEHEEEPYITVKNKNYMIKVMFLAAVARPRWSAKNHCIWDGKIGVWPFAVYEPAERSSKNRAAGTLELKTYTVDRDIYRQALCRMVIPRI--KAVWPSGKRVVLQQDNAKPHVTVDDPEVHSACSAG-GWDMKLTAQPANSPDFNANDLGFFASLQSLQHKMKAKTIEDLVNNVDDAFAKLHYTALDKVFLTLQSVLQ 701
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: W2R9B9_PHYPN (DDE_3 domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2R9B9_PHYPN) HSP 1 Score: 139 bits (351), Expect = 1.870e-33 Identity = 92/278 (33.09%), Postives = 144/278 (51.80%), Query Frame = 1
Query: 1 LEYGKDAVRRWFVELGAAKVARRIKPSLSDAQKRRRIDFICDQVDE---TTGEYLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARP---DPAHN-FDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKRVVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQ 813
L K ++ +F+ + R+KP LSD + R+ F V T + N VH+DE WFYL +E + + EE V++K+++ K+M +VA ARP H +DGKIG+ V + A+R+S+ R G +D + Y+ +++P + K W KRV +Q D A PH +PE++ + G GW + + PA SPDFNVNDLGFF S++S A +E+LV + E Y + + T+++V+ +L VLQ
Sbjct: 98 LGIAKSSLHDYFLAGAFRRHTTRLKPLLSDQHRADRLKFAYGFVHRGPRNTRVFDSFMNYVHLDEKWFYLKKENQGFYLGTHEEPPHLT-VKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRQALCRMVIPSV--KAVWPSGKRVFLQHDNAKPHVAADDPEVVAACSDG-GWDMSIKPPPANSPDFNVNDLGFFTSIQSLQHKKKARTIEDLVNNVEEAYSQLEYSTIDKVFVTLQSVLQ 371
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Match: A0A6G0WUD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUD8_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.160e-33 Identity = 84/250 (33.60%), Postives = 142/250 (56.80%), Query Frame = 1
Query: 73 KPSLSDAQKRRRIDFICDQVDETTGEYLDQGNMVHVDESWFYLMREKENVRVFPGEEVLGAPR-VQHKSHLPKIMVIVANARPDPAHNFDGKIGIRRICVIKTAQRASERRKRGEEYEFDCTIDAEWYKDWYIDVLLPEINKKMPW*RSKR--VVVQQDGASPHTGEGNPEILNSAGMGHGWLVELVTQPAQSPDFNVNDLGFFASLKSRVWAMNACAVEELVETIFEQYEEYDGETLERVWQSLFKVLQ 813
+P+LSD Q+ R+ F + VD Y ++VH+DE WF++ + + ++ E ++ PR VQ+KSH+ K+M +VA ARP ++DGK+G QR S+ R+ GE ++ Y+++ D++LP I K W ++ + VQQD A H+ + EIL +A GW +E+ QPA+SPD NV DLGFF S+++ + +EEL++ + + + + TLE+ +++L +V+Q
Sbjct: 132 RPALSDQQRACRLAFCKNFVDMNYASY----DVVHLDEKWFFMAKIRRKFLLWHDEAMV--PRHVQNKSHITKVMFLVAVARP--RGDWDGKVGCWPFVTKVQGQRTSKNRRAGELVLTPVSVTGAIYREYLCDLVLPAIKNKWVWPSNEHGTIFVQQDNAPAHSRLDDAEIL-AACNSDGWNIEMRFQPAKSPDLNVLDLGFFNSIQALQQRLECGTIEELIDAVKISFHDLERLTLEKTFRTLHRVVQ 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig783.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig783.11.1 >prot_P-littoralis_Contig783.11.1 ID=prot_P-littoralis_Contig783.11.1|Name=mRNA_P-littoralis_Contig783.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp MVHVDESWFYLMREKENVRVFPGEEVLGAPRVQHKSHLPKIMVIVANARPback to top mRNA from alignment at P-littoralis_Contig783:50129..51065- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig783.11.1 ID=mRNA_P-littoralis_Contig783.11.1|Name=mRNA_P-littoralis_Contig783.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=937bp|location=Sequence derived from alignment at P-littoralis_Contig783:50129..51065- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig783:50129..51065- >mRNA_P-littoralis_Contig783.11.1 ID=mRNA_P-littoralis_Contig783.11.1|Name=mRNA_P-littoralis_Contig783.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=342bp|location=Sequence derived from alignment at P-littoralis_Contig783:50129..51065- (Pylaiella littoralis U1_48)back to top |