mRNA_P-littoralis_Contig782.39.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5JIR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR5_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.390e-21 Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 1 YLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFVEVV 192
YLI++ R +VLYY+ GW+ASR WTHQRR NLSPDW R+V HNTYQSS+ A A +P++ F EVV
Sbjct: 258 YLISQSRGQVLYYVCGWMASRAWTHQRRRNLSPDWYRIVEHNTYQSSEMAKARDPMIGQFAEVV 321
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5KGF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF3_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.090e-19 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 7 IAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDF 180
I KP +VLYYIAGW AS+ WTH RRHNLS DWVRVV+HNT +S EAI + +LRDF
Sbjct: 71 ITKPCGQVLYYIAGWAASKAWTHHRRHNLSQDWVRVVQHNTRRSRGEAICTDSMLRDF 128
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5JQL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL1_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-18 Identity = 39/58 (67.24%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 1 YLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLR 174
Y I K R +VLYYIAGW AS+ WTH+RRHNLS DWVRVV+HNT +SS EAI + +LR
Sbjct: 158 YQITKSRGQVLYYIAGWAASKAWTHKRRHNLSQDWVRVVQHNTRRSSGEAICTDSMLR 215
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.370e-18 Identity = 41/61 (67.21%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 1 YLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 183
Y I++PR +VLYYIAGW AS+ THQ RHNLS DWVRVV+HNT +SS+EAI +LRDFV
Sbjct: 176 YQISRPRGQVLYYIAGWAASKALTHQARHNLSQDWVRVVQHNTRRSSREAIFTNVMLRDFV 236
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5JX42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX42_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 9.330e-16 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 1 YLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 183
Y I++PR +VL+ IAGW S+ THQ RHNLS DWVRVV+HNT +SS+EA+ +LRDFV
Sbjct: 37 YQISRPRGQVLHDIAGWATSKALTHQARHNLSQDWVRVVQHNTRRSSREAMFTNVMLRDFV 97
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5KKY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY9_9PHAE) HSP 1 Score: 55.1 bits (131), Expect = 2.560e-7 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 1 YLIAKPRARVLYYIAGWLASRVWTHQRRHNLS 96
Y I +PR +VLYY+AGW AS+ WTHQR HNLS
Sbjct: 27 YQITQPRGQVLYYVAGWAASKAWTHQRSHNLS 58
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI) HSP 1 Score: 54.3 bits (129), Expect = 5.780e-7 Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 7 IAKPRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFV 183
+ KPRA+VLYYI+GWL S+VWTH RR + +WV V N S+ A+ + L V
Sbjct: 196 VTKPRAKVLYYISGWLLSKVWTHVRRQKIEEREWVSFVDLNKSASAGAAVEKDKELEHLV 255
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 53.5 bits (127), Expect = 1.080e-6 Identity = 27/60 (45.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 16 PRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFVEVV 192
PR R+LYYIAGW+ S++ TH RRHN+ +W+ +V + Y S + A +E LR E V
Sbjct: 155 PRRRLLYYIAGWVLSKIVTHVRRHNIQEIEWMWIVDRHKYPSKRAAEENEMELRGVTEEV 214
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Match: D7G5R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R0_ECTSI) HSP 1 Score: 49.3 bits (116), Expect = 3.270e-5 Identity = 25/60 (41.67%), Postives = 33/60 (55.00%), Query Frame = 1
Query: 7 IAKPRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFV 183
+ KPRA+VLYYI+GWL S+ W H RR + +WV V N S A+ + L V
Sbjct: 138 VTKPRAKVLYYISGWLLSKDWAHVRRQKIEEREWVSFVDLNKSASEGAAVEKDKELEHLV 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig782.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig782.39.1 >prot_P-littoralis_Contig782.39.1 ID=prot_P-littoralis_Contig782.39.1|Name=mRNA_P-littoralis_Contig782.39.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=64bp YLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAback to top mRNA from alignment at P-littoralis_Contig782:115659..115851+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig782.39.1 ID=mRNA_P-littoralis_Contig782.39.1|Name=mRNA_P-littoralis_Contig782.39.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=193bp|location=Sequence derived from alignment at P-littoralis_Contig782:115659..115851+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig782:115659..115851+ >mRNA_P-littoralis_Contig782.39.1 ID=mRNA_P-littoralis_Contig782.39.1|Name=mRNA_P-littoralis_Contig782.39.1|organism=Pylaiella littoralis U1_48|type=CDS|length=192bp|location=Sequence derived from alignment at P-littoralis_Contig782:115659..115851+ (Pylaiella littoralis U1_48)back to top |