mRNA_P-littoralis_Contig777.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 196 bits (498), Expect = 4.860e-59 Identity = 87/125 (69.60%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+CDAQYRI AW MNCPGSQNDRTAF SGF KLL GLP+G+++VGDAAY S+ V+VP+PG +S SQDA NYY+SQCR+AIEQT+GILVR WGILWRP+EVR+ +V ++VRLHNFCRD+
Sbjct: 212 AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDR 336
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 191 bits (486), Expect = 5.120e-59 Identity = 85/125 (68.00%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+CDAQYRI AWTM+CPGSQNDRTAF + F KLL GLP+G+++VGDAAY S+ V+VP+PG +S SQDA NYY+SQCR+AIEQT+GILVR WGILWRP+EVR+ +V ++VRLHNFCRD+
Sbjct: 60 AVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDR 184
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.690e-53 Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCR 369
A+C+A+Y+I AWTMNCPGS NDRTAFK SGF ++L+ LPKG YIVGD AYP SD VLVPYPG ++ SQD+ N+Y SQ RI IEQ FG +V+TWGILWRPL+V+LG V+ ++ ++VRLHNF R
Sbjct: 153 AVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLR 275
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 175 bits (444), Expect = 5.680e-51 Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 4 ICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCR 369
+C+A+Y I AWTMNCPGS NDRTAFK S F +L+ LP G YIVGDAAYP SD VLVPYPG ++ SQDA N+Y SQ RI+IEQ FGI+V+TWGILWRPL++RL V+ ++ S+VRLHNF R
Sbjct: 220 VCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLR 341
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 164 bits (414), Expect = 2.730e-47 Identity = 78/125 (62.40%), Postives = 96/125 (76.80%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+CDAQYRI AW MNCPGSQNDRTAF SGF KLL GLP+G+++VGDAAY S+ V+VP+PG +S SQDA NYY+SQCR+AIEQT+GILV G+ +E +V ++VRLHNFCRD+
Sbjct: 141 AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDR 258
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.700e-46 Identity = 77/122 (63.11%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 4 ICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCR 369
IC+A Y I WTMNCPGSQNDRTAFK SGF LL +P +IVGDAAYP S+ VLVP PG ++ SQDA N+Y SQ RI+IEQ FGILV+TW ILW+PL +RL V ++ ++VRLHNF R
Sbjct: 224 ICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLR 345
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.060e-35 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+C A YR A + PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG ++ +D+ N++LSQ R+ IEQ+FGILV TWGILWRPL V+LG A L+ +L LHNF +D+
Sbjct: 253 AMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNFLQDE 377
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5KQF5_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQF5_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.090e-35 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+C A YR A + PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG + +D+ N++LSQ R+ IEQ+FGILV TWGILWRPL V+ A L+ +L LHNF +D+
Sbjct: 96 AMCTADYRFYAMSATSPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQFAGRADLITALFHLHNFLQDE 220
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5K6X9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X9_9PHAE) HSP 1 Score: 129 bits (325), Expect = 8.150e-35 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+C YR A PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG ++ +D+ N++LSQ R+ IEQ+FGILV TWGILW PL ++LG L+ +L+ LHNF +D+
Sbjct: 62 AMCTVNYRFCAMPAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWTPLRMQLGGRGDLITALLHLHNFLQDE 186
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Match: A0A6H5L3C4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C4_9PHAE) HSP 1 Score: 133 bits (334), Expect = 2.510e-34 Identity = 62/125 (49.60%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYPGSDVVLVPYPGIKVSESQDALNYYLSQCRIAIEQTFGILVRTWGILWRPLEVRLGSVAPLVESLVRLHNFCRDQ 375
A+C A YR A + PGS ND A+ S K + LP G++I+GDAAYP + +L PYPG + +D+ N++LSQ R+ IEQ+FGILV TWGILWRPL V+ G A L+ +L LHNF +D+
Sbjct: 290 AMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPAGFHIIGDAAYPIGEKLLTPYPGRLLPPGEDSFNFHLSQVRVMIEQSFGILVATWGILWRPLHVQYGGRADLITALFHLHNFLQDE 414 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig777.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig777.1.1 >prot_P-littoralis_Contig777.1.1 ID=prot_P-littoralis_Contig777.1.1|Name=mRNA_P-littoralis_Contig777.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp AICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEGLPKGYYIVGDAAYback to top mRNA from alignment at P-littoralis_Contig777:7860..8483- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig777.1.1 ID=mRNA_P-littoralis_Contig777.1.1|Name=mRNA_P-littoralis_Contig777.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=624bp|location=Sequence derived from alignment at P-littoralis_Contig777:7860..8483- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig777:7860..8483- >mRNA_P-littoralis_Contig777.1.1 ID=mRNA_P-littoralis_Contig777.1.1|Name=mRNA_P-littoralis_Contig777.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig777:7860..8483- (Pylaiella littoralis U1_48)back to top |