mRNA_P-littoralis_Contig775.29.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 3.560e-133 Identity = 192/256 (75.00%), Postives = 215/256 (83.98%), Query Frame = 2
Query: 122 MASAGEGGVDDLLPELALAVALAALREVQQDDFLSDAEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
M++A EG V DL PE+ALA ALAAL ++QQDD LSDAE K D TCAWAQ+LED+DL+D TS+ A+KFREDFRVPYPFFLRLVE+VK+KDWFAT QRDA+GR+CHPVEHKVLACLTIL RGN FGSIY LSWMS+ VQK FH+FC+HFATEMYD+HI+LPS+ NGELD+VMG+YEKLGFPGAMGSTDVTHI WSRCPYNQ RSYTGKEGKPTVGYQVTV+H GRVLAVTEGFTGSTND
Sbjct: 1 MSAAAEGRVKDLHPEVALAAALAALDDIQQDDMLSDAEXXXXXXXXXXXXXXXXXXKNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTND 256
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 328 bits (841), Expect = 5.710e-108 Identity = 170/254 (66.93%), Postives = 196/254 (77.17%), Query Frame = 2
Query: 137 EGGVDD--LLPELALAVALAALREVQQDDFLSDAE-AEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
E GV D LLP ALAVAL AL EVQ++D + E PD +P R +RQRK +E CAWA++LEDKDLE++ S T+++FR DFRVP FFLRLV +VK K+WFATA DA GRQ HPVEHKVLA LTIL RGNCF SIY +SWMS+ VQ FH FCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI W++CPYN RSYTGKEG PT+GYQVTV+H GR AVTEGFTGSTND
Sbjct: 3 ENGVGDDALLPATALAVALVALDEVQRNDLSQEEEDTAPDLTRPRLSRTQRQRKY--VERCAWARMLEDKDLEESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTND 254
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 319 bits (818), Expect = 7.510e-107 Identity = 163/242 (67.36%), Postives = 188/242 (77.69%), Query Frame = 2
Query: 122 MASAGEGGVDDLLPELALAVALAALREVQQDDFLSDAEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGR 847
MA G G D LLP ALAVAL AL EVQ++D LS E + + P + R QR++KD++TCAWAQ+LEDKDLED+ S T+++FR DFRVPY FFLRLV +VK K+WF TA D GR HPVEHKVLA LTIL RGNCF SIY +SWMS+ VQ FHKFCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQVTV+H GR
Sbjct: 1 MAETGVGD-DALLPATALAVALVALDEVQRND-LSQEEEDTAPDLPRPRLSRTQRQRKDVKTCAWAQMLEDKDLEDSNSRTSKQFRLDFRVPYSFFLRLVALVKSKNWFVTAGCDGAGRHSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGR 240
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 315 bits (808), Expect = 3.370e-103 Identity = 163/256 (63.67%), Postives = 185/256 (72.27%), Query Frame = 2
Query: 122 MASAGEGGVDDLLPELALAVALAALREVQQDDFLSDAEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
MA G G D LLP ALA AL AL E RK+K++E CAWAQ+LEDKDLED+ S+++++FR DFRVP FFLRLV +VK KDWF T+ DA RQ HPVEHKVLA LTIL RGNCF SIY +SWMS+ VQ FHKFCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQVTV+H GR +AVTEGFT STND
Sbjct: 1 MAETGVG--DALLPATALAGALVALDE---------------------------RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTND 227
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 291 bits (745), Expect = 4.740e-93 Identity = 149/249 (59.84%), Postives = 174/249 (69.88%), Query Frame = 2
Query: 143 GVDDLLPELALAVALAALREVQQDDFLSDAEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
G+D LLP ALAVAL A+ E+ LLEDKDLED+TS+TA++ R DFRVPY FLRLV +VK K+WF+TA DA G HPVEHKVLA LTIL RGNCF SIY +SWMS+ VQ FHKFC+HFA EMYD+ I+LP++ +G+LD VM +Y++LGF GA+GS DVTHIAWSRCPYNQARSYTGKEG PT+ YQVTVDH GR +AVTEGFTGSTND
Sbjct: 5 GMDALLPATALAVALVAVHEL---------------------------------------LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTND 214
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5KFR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR8_9PHAE) HSP 1 Score: 271 bits (693), Expect = 5.410e-85 Identity = 164/295 (55.59%), Postives = 191/295 (64.75%), Query Frame = 2
Query: 23 WLPSLLLLPLLLIAGGQRVTSSSLPARSGALYSMASAGEGGVDDLLPELAL-AVALAALREVQ-----QDDFLSDAEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
WLPSL LL AG T + P S +L S+ A G D LLP AL AV LAAL +VQ Q D L + + PD +P K R QRK+KD+E CAWAQ+LEDKDL+D+ S+T+++FR DFRVPY FFLRL +VK KDWF T+ DA GRQ HPVEHKVLA LTIL RGNCF SIY +SWMS+ KT N ELD VM +Y++LGF G+MGS DVTHI WS+CPYN ARSYTGKEG P +GYQV V H GR +AVTEGFT STND
Sbjct: 4 WLPSLALL-----AGAGSATRLTPPYIS-SLGSLPMAETGVGDALLPATALLAVTLAALDKVQRNDLSQKDLLEEEDRAPDLPRP--KLNRGQRKRKDVEKCAWAQMLEDKDLDDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSA----KT-----------------------NDELDHVMEQYDRLGFSGSMGSMDVTHIGWSKCPYNLARSYTGKEGVPAIGYQVMVSHAGRAIAVTEGFTCSTND 263
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5JBL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL1_9PHAE) HSP 1 Score: 265 bits (678), Expect = 2.610e-83 Identity = 156/289 (53.98%), Postives = 183/289 (63.32%), Query Frame = 2
Query: 23 WLPSLLLLPLLLIAGGQRVTSSSLPARSGALYSMASAGEGGVDDLLPELALAVALAALREVQQDDFLSDAEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
WLPSL LL AGG T + P S +L S+ A G D LLP ALAV L AL EVQ++D + E + + P K R QRK+KD+E CAWA++LEDKDLED+ S+T+++FR DFRVPY FFLRL +VK KDWF T+ DA GRQ H VEHKVLA LTIL RGNCF SIY +SWMS VQ FHKF KHFA EMYD+HIYLPS+ NGELD VM + ++LGF GAM S VT V+H GR + VTEGFTGSTND
Sbjct: 4 WLPSLELL-----AGGGSATRLTPPYIS-SLDSLPMAETGVGDALLPATALAVVLVALDEVQRNDLSQEEEEDRAPDLPRPKLSRGQRKRKDVEKCAWAKMLEDKDLEDSNSITSKQFRLDFRVPYSFFLRLGALVKSKDWFTTSGCDAAGRQSHQVEHKVLAWLTILGRGNCFASIYQMSWMSGKTVQTMFHKFRKHFAREMYDEHIYLPSEQNGELDHVMEQCDRLGFLGAMSSMGVT-----------------------------VNHAGRAIVVTEGFTGSTND 257
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 257 bits (656), Expect = 5.560e-79 Identity = 139/263 (52.85%), Postives = 181/263 (68.82%), Query Frame = 2
Query: 140 GGVDDLLPELALAVALAALREVQQ---------DDFLSDAEAEP-DEEQPLEKRPRRQRKKKDIETCAWAQ-LLEDKDLEDTTSVTAE--KFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
GG+D AVA A+L+++Q+ +DF D E + D+E E + RR +KD W Q L+E ++ +T T E +FR +FRVPYPFF+ LVE+V+ +DWF T + D GRQ PVE KVLACL IL+RGN F IY +S++S V TFH+FCK+FA E+YD+++YLP+ +L KVM +Y+++GFPGA+GSTDVTHI W CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TND
Sbjct: 41 GGIDVPAAFATTAVATASLQQLQRSVAVWDVIMEDFEDDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATND 301
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 254 bits (648), Expect = 5.900e-78 Identity = 142/257 (55.25%), Postives = 174/257 (67.70%), Query Frame = 2
Query: 170 ALAVALAALREVQQDDFLS-----------DAEAEPDEEQPLEKRPRRQRKKKDIETCAWA-QLLEDKDLE-----DTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 889
A +VALAA + QQ ++ D ++E +EE E + RR +KD WA QL E KDLE D TS A +FRE FR+PYPFF+ LV +VK++DWF T ++DA GR+ PV+ KVLACL ILARGNCF IY +S++S TFH+F ++FA EMY +HI+LP+ + KVM +Y++LGF GA GSTDVTHI W CPYNQARSYTGKEG PTV YQVTVDHT RVLAVT GFTGSTND
Sbjct: 31 AFSVALAAFNQQQQRTLVAWDLVLDDLDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTND 285
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 247 bits (630), Expect = 1.580e-75 Identity = 130/226 (57.52%), Postives = 158/226 (69.91%), Query Frame = 2
Query: 155 LLPELALAVALAALREVQQDDFLSD--AEAEPDEEQPLEKRPRRQRKKKDIETCAWAQLLEDKDLEDTTSVTAEKFREDFRVPYPFFLRLVEVVKRKDWFATAQRDAFGRQCHPVEHKVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQV 826
LLP ALAVAL A+ EVQ++D E +P + P E+ R QR++KD+ETCAWAQLLEDKDLED+TS+TA++FR DFRVPY FFLRLV +VK K+WF A DA GR HPVEHKVLA LTIL R NCF SI+ +SWMS+ VQ FHKFC+HFA +MYD+HI+L ++ +G+LD V+ G CPYNQARSYTGKEG PT+ YQV
Sbjct: 55 LLPARALAVALVAVDEVQRNDLSQQDLLEEDPASDLPFERLARSQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFLAAATDAVGRASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQV 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig775.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig775.29.1 >prot_P-littoralis_Contig775.29.1 ID=prot_P-littoralis_Contig775.29.1|Name=mRNA_P-littoralis_Contig775.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=292bp MLVWLPSLLLLPLLLIAGGQRVTSSSLPARSGALYSMASAGEGGVDDLLPback to top mRNA from alignment at P-littoralis_Contig775:88192..91249- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig775.29.1 ID=mRNA_P-littoralis_Contig775.29.1|Name=mRNA_P-littoralis_Contig775.29.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3058bp|location=Sequence derived from alignment at P-littoralis_Contig775:88192..91249- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig775:88192..91249- >mRNA_P-littoralis_Contig775.29.1 ID=mRNA_P-littoralis_Contig775.29.1|Name=mRNA_P-littoralis_Contig775.29.1|organism=Pylaiella littoralis U1_48|type=CDS|length=876bp|location=Sequence derived from alignment at P-littoralis_Contig775:88192..91249- (Pylaiella littoralis U1_48)back to top |