mRNA_P-littoralis_Contig77.83.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig77.83.1
Unique NamemRNA_P-littoralis_Contig77.83.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: D7G711_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G711_ECTSI)

HSP 1 Score: 509 bits (1312), Expect = 3.150e-172
Identity = 279/343 (81.34%), Postives = 292/343 (85.13%), Query Frame = 1
Query:   82 MLRLTVLAVSMACCSSFLVPPMILRSPPRMDGKVGLQMMSHAEQDAAESSTDEPLYARPVDRGTLLKAIPATVVAGALGVAVAGSAPKSAXXXXXXXXXPARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA 1110
            MLRLTVLA  MA CSSFLVPP++LR PP M+   G   M+    D A+S     L   PVDR TLL AIPATVVAG LG AVAGSAP+ A         PA T VVVLGGNGFVGSKVCE+LVEAG  VTSVSRSG+KPD+WAAGQSWVDKVSWTKGDPTAGDLS VF KA+AVISCVGVIGGSD EMEKGNGDVNV AA QAA G AGRFVYVSVSHLVPEAFGG AFKGYF+GKSRAEEAIAKSFPSTGVLIKP+FIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGT FDGADEI+AAASKA
Sbjct:    1 MLRLTVLAAFMAGCSSFLVPPVLLR-PPIMETSKGALHMTQNNDDMADSDYSG-LSDGPVDRRTLLTAIPATVVAGVLGFAVAGSAPEKALARATPKAAPAGTNVVVLGGNGFVGSKVCELLVEAGATVTSVSRSGSKPDKWAAGQSWVDKVSWTKGDPTAGDLSAVFGKAAAVISCVGVIGGSDEEMEKGNGDVNVQAAKQAASGKAGRFVYVSVSHLVPEAFGGAAFKGYFDGKSRAEEAIAKSFPSTGVLIKPTFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTKFDGADEINAAASKA 341          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S0MWV8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWV8_9CHLO)

HSP 1 Score: 243 bits (621), Expect = 5.180e-70
Identity = 158/301 (52.49%), Postives = 184/301 (61.13%), Query Frame = 1
Query:  217 AAESSTDEPLYARPVDRGTLLKAIPAT---VVAGALGVAVAGSAPKSAXXXXXXXXXPARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA 1110
            +A SS  E      V R  +L A PA    VV G  G+ +  SA   A            TKVVVLGGNGFVGS+V E LV  G  V SVS+SG KP    A  +  DKV+WTK D    D S  FS A AVISCVGVIGGSD  M+ GNG  NV AA  AA     +FVYVSV+ +VP A  G+A KGYF GK  AE AIA  FP T V++ PSFIYGGDSF L PPRV  GYG  I+ LLSSG +RA++GI  G I + L+PPV+ ++VA A VAGALG +     DG D I+AAA KA
Sbjct:   43 SAASSKKEETQGTQVTRRQVLTAAPAAALAVVLGTTGMPLEASAMVMANPG---------TKVVVLGGNGFVGSRVVEALVARGAEVVSVSKSG-KP----AAIAGADKVTWTKADVLTADFSETFSGADAVISCVGVIGGSDEYMQTGNGATNVAAAKAAAAAKVPKFVYVSVASIVPAAVDGIALKGYFAGKREAEAAIAAEFPGTSVVVGPSFIYGGDSFVLNPPRVPAGYGGAIEGLLSSGVMRALSGIG-GPIGLTLAPPVAVESVAGAVVAGALGLVPAGKIDGTDAINAAAKKA 328          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A061RK23_9CHLO (Nad-binding rossmann-fold superfamily protein isoform 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK23_9CHLO)

HSP 1 Score: 220 bits (560), Expect = 3.030e-61
Identity = 116/244 (47.54%), Postives = 160/244 (65.57%), Query Frame = 1
Query:  391 KVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQW-AAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGV----AFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASK 1107
            KVVVLGG GFVGS++CE L ++G  V SVSR G  P+        W  K+SW K D    DLS +F  +  VISC+GVIGGS   ME GNG  N+ A  ++      +FVY+SV+ +VP++  G+    + +GYF GK  AE A+ ++FP + V+++PSF+YGG  FGL+PPRV+  YGS ++ALLSS P++ IA I PG + + L PPV+ +NVA A VAGA+G +     DG  EI+AAA++
Sbjct:   88 KVVVLGGTGFVGSRICERLAKSGFRVISVSRRGKVPEPTDEEAPVWKSKISWIKADVLKDDLSAIFEDSKTVISCIGVIGGSYENMETGNGAANIAAVKKSKSAGVEKFVYISVASIVPDSVEGLLGSSSLEGYFAGKREAEAAVLEAFPDSAVVVRPSFVYGGSEFGLSPPRVAGAYGSAVEALLSSSPVKNIARIMPGPVALTLEPPVAVENVAAAAVAGAVGAIPPGIVDGTAEINAAAAE 331          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S0TQM2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TQM2_HEMAN)

HSP 1 Score: 212 bits (539), Expect = 3.360e-59
Identity = 119/237 (50.21%), Postives = 151/237 (63.71%), Query Frame = 1
Query:  391 KVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIK-PSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAA 1098
            KVVVLGG GFVGS+VC+ LVE+G +VTSVS SG  P+ WA G+ WV++V WT GD    DL    S A A +SCVGVIG  D  +  GNG   V  A  A      RFVYVSV+  V +  G +A KGYF GK  +E AIA+++ +   LI  P F+YGGDSF ++PPRV+  YGS ++  LS  P +A+AG+ PG+  +AL PPV  D+VA A  +GALG LQ    DG + I  A
Sbjct:   22 KVVVLGGAGFVGSRVCKTLVESGCSVTSVSLSGVPPE-WAKGEPWVEQVQWTAGDAAKDDLKGTMSGAKACVSCVGVIGFDDEYLAAGNGPPTVEGAKMAKAAGVPRFVYVSVADAVRDNVGSIALKGYFAGKKESEAAIAEAYGADNSLIVCPGFVYGGDSFAISPPRVNQQYGSFVENTLSLAPFKALAGVLPGVAGLALQPPVCVDDVAKAVTSGALG-LQSGRVDGTESIKEA 256          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S0YYY3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYY3_9CRYP)

HSP 1 Score: 209 bits (532), Expect = 9.970e-58
Identity = 118/245 (48.16%), Postives = 153/245 (62.45%), Query Frame = 1
Query:  379 PARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSF-PSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA 1110
            P   KVVVLGG GFVGS+V + LVE+G+ VTSVS SG  P+ WA  + WV++V WT GD    DL  +   + AV+SCVGVIG  +  +  GNG   V    QA      RFVYVSV+  V +  GG+A +GYF GK  +E AIA+++ P   +++ P FIYGGDSF ++PPRV+  YGS ++  LS  P +A+AG  PG+  +AL PPV  D+VA A  AG LG LQ    DG + I AA   A
Sbjct:   53 PNSNKVVVLGGAGFVGSRVSKTLVESGLQVTSVSLSGTPPE-WAKDEPWVEQVEWTAGDSAKDDLKGLMRGSKAVVSCVGVIGFDNEYLAAGNGPPTVEGCQQAKAAGVPRFVYVSVADAVRDNVGGIALQGYFAGKKESEAAIAETYGPERSLVVGPGFIYGGDSFAISPPRVNQAYGSLVENTLSLAPFKALAGALPGVAGLALQPPVCVDDVAKAVTAGVLG-LQSGRVDGTESIKAAGQAA 295          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S3VWQ3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWQ3_EMIHU)

HSP 1 Score: 206 bits (525), Expect = 7.150e-57
Identity = 123/245 (50.20%), Postives = 149/245 (60.82%), Query Frame = 1
Query:  382 ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPV---FSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVA--FKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAA 1101
            A  KV VLGG+GFVGS+ C+ LVE GV+VTSVS SGA PD W AGQ W   V W K + T G    V        AV+S VG IG     +  GNG  NV AA  AA   A R+VY+ V+  V +A   +   F GYF+GK+ AE AIA  F      ++PSFIYGGDSFGL PPRVS GYGS ++ LLS  P+ A+A + PGL+KVAL PPVS + VA A  A A G +     +G   I+AAA
Sbjct:   20 AALKVTVLGGSGFVGSRCCKALVEKGVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAEAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVALRPPVSVEAVAGAAAAAAQGEVSEPVLEGVTAINAAA 263          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S1RWJ9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWJ9_ALECA)

HSP 1 Score: 195 bits (496), Expect = 1.190e-52
Identity = 115/242 (47.52%), Postives = 147/242 (60.74%), Query Frame = 1
Query:  391 KVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGD---PTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASK 1107
            +V VLGG+GFVG ++CE LV AG  V S+SRSG  P    A   W  KV W KGD   P   DL+   + A AV+S +G IG  D    +GNG  N  A + A    A RFV VS S  V ++     F GY  GK RAE A+A  FP++ ++++P+FIYGG+ F  TPPRV+  YGS ++ LL +G  R +A  +PG  K+ALSPP S + VA A VAGALG+  GT  D  DEI AAA+K
Sbjct:   67 RVAVLGGSGFVGRRICEQLVAAGAEVVSLSRSGGPPPGTGA---WASKVQWLKGDVLAPGGSDLAAAVAGADAVVSSIGSIGSGDDA--RGNGATNEAAVAAATSAQAKRFVLVSASSQVAKSGLDAVFGGYIEGKRRAEAAVAAQFPASSLVLQPTFIYGGEDFSATPPRVAGWYGSKVEGLLDTGLFRGLAAATPGFFKLALSPPNSAEEVAAAAVAGALGQASGTLADH-DEIKAAAAK 302          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: R1E7I8_EMIHU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E7I8_EMIHU)

HSP 1 Score: 193 bits (490), Expect = 3.840e-52
Identity = 118/236 (50.00%), Postives = 142/236 (60.17%), Query Frame = 1
Query:  382 ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPV-FSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVA--FKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPP-VSRDNVALACVAGA-----LGRLQG 1062
            A  KV VLGG+GFVGS+ C+ LVE GV+VTSVS SGA PD W AGQ W   V W K + T G    V      AV+S VG IG     +  GNG  NV AA  AA   A R+VY+ V+  V +A   +   F GYF+GK+ AE AIA  F      ++PSFIYGGDSFGL PPRVS GYGS ++ LLS  P+ A+A + PGL+KVAL PP V+  N A     G      LG L+G
Sbjct:   15 AALKVTVLGGSGFVGSRCCKALVENGVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVALRPPGVTAINAAAGAEPGKGLSEMLGALKG 249          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S4QFS6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFS6_9STRA)

HSP 1 Score: 194 bits (493), Expect = 8.290e-52
Identity = 120/254 (47.24%), Postives = 152/254 (59.84%), Query Frame = 1
Query:  385 RTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGD---LSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAK-GNAGRFVYVSVSHLV--------PEAFGGVAFKGYFNGKSRAEEAIAKSFPSTG---VLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAA 1101
            + KV VLGG GFVGS+VC++L E G  VTSVS+SG  P  W AG++W D VSW   D   GD   L+       A++SCVGV+G    E+ KGNG+ NV   + AAK G   R V+VSVS  V        PE FG     GYF GK  AE+A  ++         ++KP+FIYGG SFGL PPRV+  YGS ++ LLS+  IR +A ++PGLIKVAL PP + + VA AC   ALG       DG D+I+ AA
Sbjct:   49 KAKVTVLGGTGFVGSRVCKLLQEEGADVTSVSKSGTIPS-WCAGEAWTDGVSWKSADLLGGDESSLASAIGTPEAIVSCVGVVGFDREELLKGNGNANVAGFNAAAKSGGLKRSVFVSVSSEVAACEEKWLPEFFG-----GYFEGKRMAEKAALEAVEGNADSVCIVKPTFIYGGGSFGLFPPRVNAAYGSAVEELLSNKLIRVLADVTPGLIKVALRPPSAVEAVAGACAKAALGEKVKGTLDGTDDINEAA 296          
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S1B627_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B627_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.600e-50
Identity = 110/246 (44.72%), Postives = 141/246 (57.32%), Query Frame = 1
Query:  382 ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGD---LSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAF---KGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAA 1101
            A   V VLGG+GFVGS+VC  LV +G +V SVSRSGA P  W A   W   V W   D T G    L       SAV+SCVG +G     ++ GNG  N      A K  A +F+YVSV+  V E+ G + +    GYF GK  AE A   +F      ++PSF+YGG+ FGL PPRVS+ YGSG++ LLS    R +A + PGL+ VA  PPVS D +A AC   ALG ++  + DG   I++AA
Sbjct:   15 APPSVTVLGGSGFVGSRVCRALVRSGASVASVSRSGAPPS-WCADADWSSSVDWRAADLTRGSRESLEEAVGNPSAVVSCVGAVGFDVRGLQLGNGVANAEGVRAAKKTGAEKFIYVSVASEVAESAGWLPYYFRDGYFEGKKDAETAATATFGEEATFLRPSFVYGGEGFGLFPPRVSEAYGSGVEELLSKEGFRFLADLLPGLLGVAFRPPVSVDALAEACARCALGEVEEKDLDGTLAINSAA 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G711_ECTSI3.150e-17281.34NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A7S0MWV8_9CHLO5.180e-7052.49Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A061RK23_9CHLO3.030e-6147.54Nad-binding rossmann-fold superfamily protein isof... [more]
A0A7S0TQM2_HEMAN3.360e-5950.21Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0YYY3_9CRYP9.970e-5848.16Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S3VWQ3_EMIHU7.150e-5750.20Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S1RWJ9_ALECA1.190e-5247.52Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
R1E7I8_EMIHU3.840e-5250.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Em... [more]
A0A7S4QFS6_9STRA8.290e-5247.24Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1B627_9STRA2.600e-5044.72Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:285033..289552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G711
PFAMsNAD_binding_10,NmrA
Model size2515
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons7
Evalue5.51e-180
EggNOG OGsCOG0702@1|root,KOG4288@2759|Eukaryota
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-01_011500.1
Descriptionubiquinone-6 biosynthetic process
Cds size1032
COG categoryGM
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.83.1prot_P-littoralis_Contig77.83.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig77 285114..288137 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791590.052696-UTR-P-littoralis_Contig77:285032..2851131680791590.052696-UTR-P-littoralis_Contig77:285032..285113Pylaiella littoralis U1_48UTRP-littoralis_Contig77 285033..285113 +
1680791590.152093-UTR-P-littoralis_Contig77:288137..2894251680791590.152093-UTR-P-littoralis_Contig77:288137..289425Pylaiella littoralis U1_48UTRP-littoralis_Contig77 288138..289425 +
1680791590.1635664-UTR-P-littoralis_Contig77:289438..2895521680791590.1635664-UTR-P-littoralis_Contig77:289438..289552Pylaiella littoralis U1_48UTRP-littoralis_Contig77 289439..289552 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791590.066877-CDS-P-littoralis_Contig77:285113..2853391680791590.066877-CDS-P-littoralis_Contig77:285113..285339Pylaiella littoralis U1_48CDSP-littoralis_Contig77 285114..285339 +
1680791590.0846026-CDS-P-littoralis_Contig77:285856..2859771680791590.0846026-CDS-P-littoralis_Contig77:285856..285977Pylaiella littoralis U1_48CDSP-littoralis_Contig77 285857..285977 +
1680791590.097545-CDS-P-littoralis_Contig77:286172..2862011680791590.097545-CDS-P-littoralis_Contig77:286172..286201Pylaiella littoralis U1_48CDSP-littoralis_Contig77 286173..286201 +
1680791590.1143076-CDS-P-littoralis_Contig77:286548..2868641680791590.1143076-CDS-P-littoralis_Contig77:286548..286864Pylaiella littoralis U1_48CDSP-littoralis_Contig77 286549..286864 +
1680791590.130424-CDS-P-littoralis_Contig77:287411..2876221680791590.130424-CDS-P-littoralis_Contig77:287411..287622Pylaiella littoralis U1_48CDSP-littoralis_Contig77 287412..287622 +
1680791590.1418135-CDS-P-littoralis_Contig77:288008..2881371680791590.1418135-CDS-P-littoralis_Contig77:288008..288137Pylaiella littoralis U1_48CDSP-littoralis_Contig77 288009..288137 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig77.83.1

>prot_P-littoralis_Contig77.83.1 ID=prot_P-littoralis_Contig77.83.1|Name=mRNA_P-littoralis_Contig77.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=344bp
MLRLTVLAVSMACCSSFLVPPMILRSPPRMDGKVGLQMMSHAEQDAAESS
TDEPLYARPVDRGTLLKAIPATVVAGALGVAVAGSAPKSALARATPKAAP
ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVD
KVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAA
SQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPST
GVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLI
KVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA*
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mRNA from alignment at P-littoralis_Contig77:285033..289552+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig77.83.1 ID=mRNA_P-littoralis_Contig77.83.1|Name=mRNA_P-littoralis_Contig77.83.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4520bp|location=Sequence derived from alignment at P-littoralis_Contig77:285033..289552+ (Pylaiella littoralis U1_48)
GAGGTACAGGTACTGCTGTAAAAGCACTGCACTGCCGTAGAGCGAACACC CCTCCGTTCTGGTACCCCCTTCCCCCGAGCCATGCTTCGTCTCACCGTCC TCGCAGTCTCTATGGCGTGTTGCAGCTCGTTTCTAGTTCCCCCAATGATA TTGCGATCGCCACCGCGCATGGACGGCAAAGTCGGTCTTCAGATGATGAG TCATGCGGAACAAGATGCAGCTGAGTCGAGCACCGACGAACCTCTCTACG CTCGACCTGTTGACAGGGGCACCCTGCTGAAGGCCATTCCCGCCACAGTG GTAGCAGGTGCGACACGCGATAAGGTTGGAGAAAATGTATGAGAGCTCCG TCATACATATCCTAAAGCACCAACAGCGAACGACTCATGTTTTTCCAACA ATCCAACTCGCGCGAAATACTATACGCATGTTTAACATGTATGTTCTGGC TCCACTTCCTGGAAACGCACATCTGATACTTGTCGGGTACTGTACTCCTG TACAGCAGTGCCTACAACCGGTGCTGCTGTTGGTTGTATGTATAATGCAC ATCACATGTAACTCGAGTCCGGAAAGCAGCAGCATTGCAAATGCCACGCC GGAGATTATTTTACAAGCACTGACGCTGGGGTAGCCTACAGGTGTACAGC AGCAGCAGCAGATCTACGTAGATGCATGTTTAAATCTGTGCCTGTATGCG CAAGATGGCCTTGTACACATGCACATGATACCGGCAGATAATGTACCGGT ATGCAACCGCCAGCATCCTCCGACATCTGTTTTCCGTTTGCTTTCCTTCA CATATCGGCACAAAACACGCACAGGGGCGCTTGGAGTGGCAGTCGCAGGT TCAGCGCCAAAGAGCGCATTGGCAAGAGCCACGCCCAAGGCCGCGCCGGC GAGAACGAAGGTCGTCGTTCTCGGGGGCAACGGCTTCGTGGGGAGGTGAG AGTGGTGATGGTCCTGCGTGGCGGTGATTGTAGTGATAAATGGTGGCAAT ATTGCCGATCGTGGTGGTAGTGATGACATCCACAACTGACTCTCTCCCAT TGCGTCGTTCGTTCGGCCGTGTGTGCATGACCTCTCTTCACGACCAACAA TACCATCCACCACGTCCAAAACGACAACAAACGCCAACAGCAAAGTGTGC GAAGTCTTGGTCGAAGCCGGTGAGAGTAACAAACACCCTTTCCAGCAGCA GGTGCTGCGAAGGACGTTTACGTAAGGTATTCTATCAAGGGACTTGTTTG GTGAGCTTGCAGATCTCAATTGTGCCACGTGTACGAGTAGGATAGACATG CTGCCAAAGAGCGCACTCGTCGTGCTCCAAGTATGTGTCACCTTTTTCTC TTTCTGCACGACGCTCTGATTGCCTTGATCCACACCCTTCTGGTGAGTGT ACAGTAGGCTCGCGTATGTTACACCGTAAATATTGAGATATGAGTCCTGT TCGCCATCATCCTTACCCTCCAACACGGAGACGCTGTGCGGTCCTCTCCA TGATTTCCACTCACAGGAGTAGCGGTTACAAGCGTTAGCCGCAGCGGCGC CAAGCCCGACCAGTGGGCCGCGGGACAAAGTTGGGTGGACAAGGTCTCGT GGACGAAGGGTGACCCGACCGCGGGTGATCTTTCTCCAGTGTTCAGTAAG GCGTCGGCTGTAATATCTTGCGTGGGGGTCATCGGCGGCAGCGACGCCGA GATGGAAAAGGGAAACGGAGACGTTAACGTCATGGCCGCGTCGCAGGCAG CAAAAGGGAATGCCGGACGCTTCGTGTATGTGTCTGTTTCCCATCTGGTG CCGGAGGCCTTCGGCGGAGTCGCCTTCAAAGGGTGAGCGCAGCCTTGACT CGTGATGGCTCCTGGCTTCTTTGCTTCCTGTTTTTGGCATAAAATCCCCC GTTACCTTCGTTCATGCTGCGTGCTGCTCAAAGACAATTTTGAACGAATC GCCTTGAACGAAATTGCCGCAGCCCAGAGAGTCGCGACTTGTGGGTCCAG CCATTCCATGAGAGGAGGTGCTTCACATCTACAAGCTACACAGGAGTGTG TGCGTGTGTGTGTTAGTTTTCATCCATTGTGTACGCCAGTCTACGCCTCT CGGTTTATGCGGGTGCAGCAGCCAGGGCCAAGCAGGAGCCTCACACAGGA GTTTTGTTTTTCTCCACCGTTCATCTGCGGAGTGTACGACGATATTTGTG CTCCACACGTTCATGTGCTTTTCTTTCCACGCCCAAGGGTTGACACTATT AGGTGTGACGTCATGACACTGTCACGATCCCCCCGCGCCCCGTCGATATT TGTACTGCCGTCCAGCACGTAGTTTTGCTCGCTTAGCATGCAGTGTTGTT CCCTCCTTCTCTCTTTACGTTCCTTGTAGATATTTCAACGGCAAGAGCCG CGCAGAGGAGGCTATCGCCAAGTCCTTCCCGTCCACCGGAGTCCTGATCA AGCCGAGCTTCATCTACGGTGGGGATTCTTTCGGTCTGACACCTCCGAGG GTTTCTGACGGTTACGGCTCGGGTATTGACGCCCTTCTTTCCTCCGGTCC GATTCGAGCGATCGCTGGCATTTCTCCTGGCCTTATCAAGGTGTGATGTG TATGGGTCGTATGTGCGTCAAGTATCTGCGGTGCATTCTGTAACTTTACC AGTTAACGGGTCGTCAGCACGTCTGTGGACTTGCTCTTGATAGATTTCAA TGCGATATTAGCGTGTCCGGGGTGATGGATACGTGGTTCAGGAGGAAGTG ATGCCACGTCTGTTCTGTCCCAACAGTCGACGAATATCATACACAACAAT CGACGATACGGTTTTGATCAATCTCCACGGCGAGTGTTGGGTTTTCTCAT GTGTGGCGTTTCCCGTTGCCCTTTCAGCGAACTCGATGCAACATGATGGC CGTTCCCTGTTGTCACGTCCTATCATTGATTGCTCTTTTCATGCTGCGAT CATACCCTTCGGCTGTGTTGCTGCAGGTTGCGCTATCACCGCCGGTATCG AGGGATAACGTGGCGCTAGCTTGCGTAGCGGGGGCCTTGGGAAGGCTGCA AGGAACGAACTTCGACGGCGCGGACGAAATCAGCGCGGCGGCATCGAAGG CGTGATCGATTTTTTCGGCTAGGACGCGACACGTGTCTGAAAAACGAGCG AACATCGTGTTCCCACGGGCAGTCCGGTCTTCAACGGCTGAACAACACGT ACTTATTTTGAGTGGATCTGGACATCATGCTTACCAACCGTTATATGCTG GGCTGGCGCACCATATCGTTGGATTGGGGTGCGCGGAGTGTTCGAGTTTG TCTCGCCGTGTACCACTTAGCAGTGTTTTCCGTGTTATTAATGAATTTCG GAAAAAAAATGTTTTGCTCATATTTTAGCTCATATTATTTGCTCATATTA TCGGCTCAGACAAAATAGAGTGTTTGCGCAAAAGGATTTATTATCTCAAA TATCCTTTCTTGAAAAAAAAAAAAATGAAGCGCGGTGAATAAGAATTCCT TTTAAATAAAATTTGAAAATGAGTTTGCGCAAAAGGAATTCCCTTTTGAC AGAACACCCACACTCTCGTATGTTAGTGCAGAGCAACAATCCAGACACAC ATGCCCACACATATCTTACGGCTGATTATGTGCTACTGCTGTAGGATAGC CAAGACAACGAGTCTTTGGTTCAAGTAGTGGGAAAGGGTGCCGGGTCAAG CGAAGTGAATGCAAACTCAGGGGTCACGGGCAGCAGGGATGGGGCAAGTT CGGCAGAGAGGCTTTCTTTGGTTGTGGAAGAAGGCATGATTGGTGTGTGT CAACTATACTGCTGTTAACTGAGTACAGAGAAGCTGACTGCTGTATGATA CGTACGTTCTATTTTCAAGTGCAGAAAAAAGAGTTCGTTTGCATTTTCAT CGTGCTAGGTATAAACCTCGAGCGATACTTCTCTCCACCGGTTGAATGAA CCCACTTCCAACCCAACCTCCTGCGGACGGAGAGCAGTAAACAGAGGAGA CAGCAAAGAAGTTTTCGCCTTGATACGTGGTGTAGAGAGCGAGAGCGTGA CTGCTGTGACTGCCGGCGTTCTAATGTCTGTGTCCCGCGACAGCTGTATG TTGCCTCTGCTGCGGACGCAGCCAGCCTACACTCGCTACTTTCAAAGAGT CGCTCCTCAGATACTATGTTTTGCACGGCTGGCACGCTTCCACCACATGA ACCAGCGACGAAAGTGTTGGCACGGTGATTGCAGGGTTGTAGGGAACCCT TTTTGAGCTCGCTGCCTTCAGAAATCACGGCGTAGTGATCGGTGTTATCA CGAAACGTAGTGGTGTATCGTCATCTTCTCTAATAGAACACTGTTGCGGA GAGGCCGGGGTGATTTGGCCAATCACATGATGTGCCGACATGGGCTCGCC TGGCAGACCAAATATTCTTTCCAAATATCCTTTCTTGCCGGGATTTTCCG GAATTTGAGAAAAGAAATCCTTTCTGTTGCAGTCACGGAGCCTCTCGGGG AAACCTCGGGGGAACCAAGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig77:285033..289552+

>mRNA_P-littoralis_Contig77.83.1 ID=mRNA_P-littoralis_Contig77.83.1|Name=mRNA_P-littoralis_Contig77.83.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1032bp|location=Sequence derived from alignment at P-littoralis_Contig77:285033..289552+ (Pylaiella littoralis U1_48)
ATGCTTCGTCTCACCGTCCTCGCAGTCTCTATGGCGTGTTGCAGCTCGTT
TCTAGTTCCCCCAATGATATTGCGATCGCCACCGCGCATGGACGGCAAAG
TCGGTCTTCAGATGATGAGTCATGCGGAACAAGATGCAGCTGAGTCGAGC
ACCGACGAACCTCTCTACGCTCGACCTGTTGACAGGGGCACCCTGCTGAA
GGCCATTCCCGCCACAGTGGTAGCAGGGGCGCTTGGAGTGGCAGTCGCAG
GTTCAGCGCCAAAGAGCGCATTGGCAAGAGCCACGCCCAAGGCCGCGCCG
GCGAGAACGAAGGTCGTCGTTCTCGGGGGCAACGGCTTCGTGGGGAGCAA
AGTGTGCGAAGTCTTGGTCGAAGCCGGAGTAGCGGTTACAAGCGTTAGCC
GCAGCGGCGCCAAGCCCGACCAGTGGGCCGCGGGACAAAGTTGGGTGGAC
AAGGTCTCGTGGACGAAGGGTGACCCGACCGCGGGTGATCTTTCTCCAGT
GTTCAGTAAGGCGTCGGCTGTAATATCTTGCGTGGGGGTCATCGGCGGCA
GCGACGCCGAGATGGAAAAGGGAAACGGAGACGTTAACGTCATGGCCGCG
TCGCAGGCAGCAAAAGGGAATGCCGGACGCTTCGTGTATGTGTCTGTTTC
CCATCTGGTGCCGGAGGCCTTCGGCGGAGTCGCCTTCAAAGGATATTTCA
ACGGCAAGAGCCGCGCAGAGGAGGCTATCGCCAAGTCCTTCCCGTCCACC
GGAGTCCTGATCAAGCCGAGCTTCATCTACGGTGGGGATTCTTTCGGTCT
GACACCTCCGAGGGTTTCTGACGGTTACGGCTCGGGTATTGACGCCCTTC
TTTCCTCCGGTCCGATTCGAGCGATCGCTGGCATTTCTCCTGGCCTTATC
AAGGTTGCGCTATCACCGCCGGTATCGAGGGATAACGTGGCGCTAGCTTG
CGTAGCGGGGGCCTTGGGAAGGCTGCAAGGAACGAACTTCGACGGCGCGG
ACGAAATCAGCGCGGCGGCATCGAAGGCGTGA
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