mRNA_P-littoralis_Contig77.83.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: D7G711_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G711_ECTSI) HSP 1 Score: 509 bits (1312), Expect = 3.150e-172 Identity = 279/343 (81.34%), Postives = 292/343 (85.13%), Query Frame = 1
Query: 82 MLRLTVLAVSMACCSSFLVPPMILRSPPRMDGKVGLQMMSHAEQDAAESSTDEPLYARPVDRGTLLKAIPATVVAGALGVAVAGSAPKSAXXXXXXXXXPARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA 1110
MLRLTVLA MA CSSFLVPP++LR PP M+ G M+ D A+S L PVDR TLL AIPATVVAG LG AVAGSAP+ A PA T VVVLGGNGFVGSKVCE+LVEAG VTSVSRSG+KPD+WAAGQSWVDKVSWTKGDPTAGDLS VF KA+AVISCVGVIGGSD EMEKGNGDVNV AA QAA G AGRFVYVSVSHLVPEAFGG AFKGYF+GKSRAEEAIAKSFPSTGVLIKP+FIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGT FDGADEI+AAASKA
Sbjct: 1 MLRLTVLAAFMAGCSSFLVPPVLLR-PPIMETSKGALHMTQNNDDMADSDYSG-LSDGPVDRRTLLTAIPATVVAGVLGFAVAGSAPEKALARATPKAAPAGTNVVVLGGNGFVGSKVCELLVEAGATVTSVSRSGSKPDKWAAGQSWVDKVSWTKGDPTAGDLSAVFGKAAAVISCVGVIGGSDEEMEKGNGDVNVQAAKQAASGKAGRFVYVSVSHLVPEAFGGAAFKGYFDGKSRAEEAIAKSFPSTGVLIKPTFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTKFDGADEINAAASKA 341
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S0MWV8_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWV8_9CHLO) HSP 1 Score: 243 bits (621), Expect = 5.180e-70 Identity = 158/301 (52.49%), Postives = 184/301 (61.13%), Query Frame = 1
Query: 217 AAESSTDEPLYARPVDRGTLLKAIPAT---VVAGALGVAVAGSAPKSAXXXXXXXXXPARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA 1110
+A SS E V R +L A PA VV G G+ + SA A TKVVVLGGNGFVGS+V E LV G V SVS+SG KP A + DKV+WTK D D S FS A AVISCVGVIGGSD M+ GNG NV AA AA +FVYVSV+ +VP A G+A KGYF GK AE AIA FP T V++ PSFIYGGDSF L PPRV GYG I+ LLSSG +RA++GI G I + L+PPV+ ++VA A VAGALG + DG D I+AAA KA
Sbjct: 43 SAASSKKEETQGTQVTRRQVLTAAPAAALAVVLGTTGMPLEASAMVMANPG---------TKVVVLGGNGFVGSRVVEALVARGAEVVSVSKSG-KP----AAIAGADKVTWTKADVLTADFSETFSGADAVISCVGVIGGSDEYMQTGNGATNVAAAKAAAAAKVPKFVYVSVASIVPAAVDGIALKGYFAGKREAEAAIAAEFPGTSVVVGPSFIYGGDSFVLNPPRVPAGYGGAIEGLLSSGVMRALSGIG-GPIGLTLAPPVAVESVAGAVVAGALGLVPAGKIDGTDAINAAAKKA 328
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A061RK23_9CHLO (Nad-binding rossmann-fold superfamily protein isoform 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RK23_9CHLO) HSP 1 Score: 220 bits (560), Expect = 3.030e-61 Identity = 116/244 (47.54%), Postives = 160/244 (65.57%), Query Frame = 1
Query: 391 KVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQW-AAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGV----AFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASK 1107
KVVVLGG GFVGS++CE L ++G V SVSR G P+ W K+SW K D DLS +F + VISC+GVIGGS ME GNG N+ A ++ +FVY+SV+ +VP++ G+ + +GYF GK AE A+ ++FP + V+++PSF+YGG FGL+PPRV+ YGS ++ALLSS P++ IA I PG + + L PPV+ +NVA A VAGA+G + DG EI+AAA++
Sbjct: 88 KVVVLGGTGFVGSRICERLAKSGFRVISVSRRGKVPEPTDEEAPVWKSKISWIKADVLKDDLSAIFEDSKTVISCIGVIGGSYENMETGNGAANIAAVKKSKSAGVEKFVYISVASIVPDSVEGLLGSSSLEGYFAGKREAEAAVLEAFPDSAVVVRPSFVYGGSEFGLSPPRVAGAYGSAVEALLSSSPVKNIARIMPGPVALTLEPPVAVENVAAAAVAGAVGAIPPGIVDGTAEINAAAAE 331
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S0TQM2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TQM2_HEMAN) HSP 1 Score: 212 bits (539), Expect = 3.360e-59 Identity = 119/237 (50.21%), Postives = 151/237 (63.71%), Query Frame = 1
Query: 391 KVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIK-PSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAA 1098
KVVVLGG GFVGS+VC+ LVE+G +VTSVS SG P+ WA G+ WV++V WT GD DL S A A +SCVGVIG D + GNG V A A RFVYVSV+ V + G +A KGYF GK +E AIA+++ + LI P F+YGGDSF ++PPRV+ YGS ++ LS P +A+AG+ PG+ +AL PPV D+VA A +GALG LQ DG + I A
Sbjct: 22 KVVVLGGAGFVGSRVCKTLVESGCSVTSVSLSGVPPE-WAKGEPWVEQVQWTAGDAAKDDLKGTMSGAKACVSCVGVIGFDDEYLAAGNGPPTVEGAKMAKAAGVPRFVYVSVADAVRDNVGSIALKGYFAGKKESEAAIAEAYGADNSLIVCPGFVYGGDSFAISPPRVNQQYGSFVENTLSLAPFKALAGVLPGVAGLALQPPVCVDDVAKAVTSGALG-LQSGRVDGTESIKEA 256
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S0YYY3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYY3_9CRYP) HSP 1 Score: 209 bits (532), Expect = 9.970e-58 Identity = 118/245 (48.16%), Postives = 153/245 (62.45%), Query Frame = 1
Query: 379 PARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSF-PSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASKA 1110
P KVVVLGG GFVGS+V + LVE+G+ VTSVS SG P+ WA + WV++V WT GD DL + + AV+SCVGVIG + + GNG V QA RFVYVSV+ V + GG+A +GYF GK +E AIA+++ P +++ P FIYGGDSF ++PPRV+ YGS ++ LS P +A+AG PG+ +AL PPV D+VA A AG LG LQ DG + I AA A
Sbjct: 53 PNSNKVVVLGGAGFVGSRVSKTLVESGLQVTSVSLSGTPPE-WAKDEPWVEQVEWTAGDSAKDDLKGLMRGSKAVVSCVGVIGFDNEYLAAGNGPPTVEGCQQAKAAGVPRFVYVSVADAVRDNVGGIALQGYFAGKKESEAAIAETYGPERSLVVGPGFIYGGDSFAISPPRVNQAYGSLVENTLSLAPFKALAGALPGVAGLALQPPVCVDDVAKAVTAGVLG-LQSGRVDGTESIKAAGQAA 295
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S3VWQ3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWQ3_EMIHU) HSP 1 Score: 206 bits (525), Expect = 7.150e-57 Identity = 123/245 (50.20%), Postives = 149/245 (60.82%), Query Frame = 1
Query: 382 ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPV---FSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVA--FKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAA 1101
A KV VLGG+GFVGS+ C+ LVE GV+VTSVS SGA PD W AGQ W V W K + T G V AV+S VG IG + GNG NV AA AA A R+VY+ V+ V +A + F GYF+GK+ AE AIA F ++PSFIYGGDSFGL PPRVS GYGS ++ LLS P+ A+A + PGL+KVAL PPVS + VA A A A G + +G I+AAA
Sbjct: 20 AALKVTVLGGSGFVGSRCCKALVEKGVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAEAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVALRPPVSVEAVAGAAAAAAQGEVSEPVLEGVTAINAAA 263
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S1RWJ9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWJ9_ALECA) HSP 1 Score: 195 bits (496), Expect = 1.190e-52 Identity = 115/242 (47.52%), Postives = 147/242 (60.74%), Query Frame = 1
Query: 391 KVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGD---PTAGDLSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAFKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAASK 1107
+V VLGG+GFVG ++CE LV AG V S+SRSG P A W KV W KGD P DL+ + A AV+S +G IG D +GNG N A + A A RFV VS S V ++ F GY GK RAE A+A FP++ ++++P+FIYGG+ F TPPRV+ YGS ++ LL +G R +A +PG K+ALSPP S + VA A VAGALG+ GT D DEI AAA+K
Sbjct: 67 RVAVLGGSGFVGRRICEQLVAAGAEVVSLSRSGGPPPGTGA---WASKVQWLKGDVLAPGGSDLAAAVAGADAVVSSIGSIGSGDDA--RGNGATNEAAVAAATSAQAKRFVLVSASSQVAKSGLDAVFGGYIEGKRRAEAAVAAQFPASSLVLQPTFIYGGEDFSATPPRVAGWYGSKVEGLLDTGLFRGLAAATPGFFKLALSPPNSAEEVAAAAVAGALGQASGTLADH-DEIKAAAAK 302
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: R1E7I8_EMIHU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E7I8_EMIHU) HSP 1 Score: 193 bits (490), Expect = 3.840e-52 Identity = 118/236 (50.00%), Postives = 142/236 (60.17%), Query Frame = 1
Query: 382 ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGDLSPV-FSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVA--FKGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPP-VSRDNVALACVAGA-----LGRLQG 1062
A KV VLGG+GFVGS+ C+ LVE GV+VTSVS SGA PD W AGQ W V W K + T G V AV+S VG IG + GNG NV AA AA A R+VY+ V+ V +A + F GYF+GK+ AE AIA F ++PSFIYGGDSFGL PPRVS GYGS ++ LLS P+ A+A + PGL+KVAL PP V+ N A G LG L+G
Sbjct: 15 AALKVTVLGGSGFVGSRCCKALVENGVSVTSVSTSGAAPD-WCAGQEWAQSVEWRKNELTRGSRESVAIGSPDAVVSAVGAIGFDRQGLLLGNGVANVEAARAAAAAGAKRYVYIGVASEVADARDWLPGFFAGYFDGKADAEAAIADGFEGASTFVRPSFIYGGDSFGLFPPRVSAGYGSAVEELLSFPPLEALANVLPGLLKVALRPPGVTAINAAAGAEPGKGLSEMLGALKG 249
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S4QFS6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QFS6_9STRA) HSP 1 Score: 194 bits (493), Expect = 8.290e-52 Identity = 120/254 (47.24%), Postives = 152/254 (59.84%), Query Frame = 1
Query: 385 RTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGD---LSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAK-GNAGRFVYVSVSHLV--------PEAFGGVAFKGYFNGKSRAEEAIAKSFPSTG---VLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAA 1101
+ KV VLGG GFVGS+VC++L E G VTSVS+SG P W AG++W D VSW D GD L+ A++SCVGV+G E+ KGNG+ NV + AAK G R V+VSVS V PE FG GYF GK AE+A ++ ++KP+FIYGG SFGL PPRV+ YGS ++ LLS+ IR +A ++PGLIKVAL PP + + VA AC ALG DG D+I+ AA
Sbjct: 49 KAKVTVLGGTGFVGSRVCKLLQEEGADVTSVSKSGTIPS-WCAGEAWTDGVSWKSADLLGGDESSLASAIGTPEAIVSCVGVVGFDREELLKGNGNANVAGFNAAAKSGGLKRSVFVSVSSEVAACEEKWLPEFFG-----GYFEGKRMAEKAALEAVEGNADSVCIVKPTFIYGGGSFGLFPPRVNAAYGSAVEELLSNKLIRVLADVTPGLIKVALRPPSAVEAVAGACAKAALGEKVKGTLDGTDDINEAA 296
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Match: A0A7S1B627_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B627_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.600e-50 Identity = 110/246 (44.72%), Postives = 141/246 (57.32%), Query Frame = 1
Query: 382 ARTKVVVLGGNGFVGSKVCEVLVEAGVAVTSVSRSGAKPDQWAAGQSWVDKVSWTKGDPTAGD---LSPVFSKASAVISCVGVIGGSDAEMEKGNGDVNVMAASQAAKGNAGRFVYVSVSHLVPEAFGGVAF---KGYFNGKSRAEEAIAKSFPSTGVLIKPSFIYGGDSFGLTPPRVSDGYGSGIDALLSSGPIRAIAGISPGLIKVALSPPVSRDNVALACVAGALGRLQGTNFDGADEISAAA 1101
A V VLGG+GFVGS+VC LV +G +V SVSRSGA P W A W V W D T G L SAV+SCVG +G ++ GNG N A K A +F+YVSV+ V E+ G + + GYF GK AE A +F ++PSF+YGG+ FGL PPRVS+ YGSG++ LLS R +A + PGL+ VA PPVS D +A AC ALG ++ + DG I++AA
Sbjct: 15 APPSVTVLGGSGFVGSRVCRALVRSGASVASVSRSGAPPS-WCADADWSSSVDWRAADLTRGSRESLEEAVGNPSAVVSCVGAVGFDVRGLQLGNGVANAEGVRAAKKTGAEKFIYVSVASEVAESAGWLPYYFRDGYFEGKKDAETAATATFGEEATFLRPSFVYGGEGFGLFPPRVSEAYGSGVEELLSKEGFRFLADLLPGLLGVAFRPPVSVDALAEACARCALGEVEEKDLDGTLAINSAA 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.83.1 >prot_P-littoralis_Contig77.83.1 ID=prot_P-littoralis_Contig77.83.1|Name=mRNA_P-littoralis_Contig77.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=344bp MLRLTVLAVSMACCSSFLVPPMILRSPPRMDGKVGLQMMSHAEQDAAESSback to top mRNA from alignment at P-littoralis_Contig77:285033..289552+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.83.1 ID=mRNA_P-littoralis_Contig77.83.1|Name=mRNA_P-littoralis_Contig77.83.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4520bp|location=Sequence derived from alignment at P-littoralis_Contig77:285033..289552+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:285033..289552+ >mRNA_P-littoralis_Contig77.83.1 ID=mRNA_P-littoralis_Contig77.83.1|Name=mRNA_P-littoralis_Contig77.83.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1032bp|location=Sequence derived from alignment at P-littoralis_Contig77:285033..289552+ (Pylaiella littoralis U1_48)back to top |