mRNA_P-littoralis_Contig77.69.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig77.69.1
Unique NamemRNA_P-littoralis_Contig77.69.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig77.69.1 vs. uniprot
Match: D7G706_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G706_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 8.990e-68
Identity = 135/234 (57.69%), Postives = 150/234 (64.10%), Query Frame = 1
Query:   79 FSTRSHTSLPRARAQTAATPQPDRFQGSRVSRRSMTASSRR--GSSRPRGAGSSHPRQGMFLPHPQAPYEASESNKFYTASPVCTLSRIFSDSSLIQPAWSKVATSPWGEAARVSGGYGERLLNGANSVESPDFMFSKRFPGHVKDFSFKKRTRPFAYGGEANTAVSYDTPNFFRTRHTQVYGRPIEKIDKPRLIKIQLGAQIIAEPEVLETGLNSGVPLDWGDMKITGSSIAV 774
             STRS T  P+ARAQTA  PQPDR +  R + R+ TA SR    SSR RG      R G+FLP  Q  +EA E++KFYTASPVCTLSRIFSDSSLIQP+W KVATSPWGEAARV+GGYGERLLNGANSVESPDFM SK                                          VYGRPIEKIDKPRL+K+ LG QIIAEPEV ET L  G PLDWG M +TGS ++V
Sbjct:    1 MSTRSQTHWPQARAQTANLPQPDRTRSERGTLRATTARSRARDASSRRRGDA----RSGIFLP--QVKFEADENSKFYTASPVCTLSRIFSDSSLIQPSWPKVATSPWGEAARVTGGYGERLLNGANSVESPDFMLSK------------------------------------------VYGRPIEKIDKPRLLKMHLGKQIIAEPEVPETDLAGG-PLDWGGMAVTGSGVSV 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G706_ECTSI8.990e-6857.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:250639..260910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009036635.1
Model size783
Max annot lvl44056.XP_009036635.1|-
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.82e-05
EggNOG OGsCOG3119@1|root,KOG3867@2759|Eukaryota
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_011550.1
Descriptionsulfuric ester hydrolase activity
Cds size783
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791589.5256877-CDS-P-littoralis_Contig77:250638..2508611680791589.5256877-CDS-P-littoralis_Contig77:250638..250861Pylaiella littoralis U1_48CDSP-littoralis_Contig77 250639..250861 +
1680791589.5409253-CDS-P-littoralis_Contig77:251175..2514381680791589.5409253-CDS-P-littoralis_Contig77:251175..251438Pylaiella littoralis U1_48CDSP-littoralis_Contig77 251176..251438 +
1680791589.555241-CDS-P-littoralis_Contig77:259159..2592851680791589.555241-CDS-P-littoralis_Contig77:259159..259285Pylaiella littoralis U1_48CDSP-littoralis_Contig77 259160..259285 +
1680791589.5712285-CDS-P-littoralis_Contig77:260290..2603561680791589.5712285-CDS-P-littoralis_Contig77:260290..260356Pylaiella littoralis U1_48CDSP-littoralis_Contig77 260291..260356 +
1680791589.589416-CDS-P-littoralis_Contig77:260805..2609101680791589.589416-CDS-P-littoralis_Contig77:260805..260910Pylaiella littoralis U1_48CDSP-littoralis_Contig77 260806..260910 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.69.1prot_P-littoralis_Contig77.69.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig77 250639..260910 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig77.69.1

>prot_P-littoralis_Contig77.69.1 ID=prot_P-littoralis_Contig77.69.1|Name=mRNA_P-littoralis_Contig77.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp
MASRQRERVGAGQTTNFAIPARAVGPFSTRSHTSLPRARAQTAATPQPDR
FQGSRVSRRSMTASSRRGSSRPRGAGSSHPRQGMFLPHPQAPYEASESNK
FYTASPVCTLSRIFSDSSLIQPAWSKVATSPWGEAARVSGGYGERLLNGA
NSVESPDFMFSKRFPGHVKDFSFKKRTRPFAYGGEANTAVSYDTPNFFRT
RHTQVYGRPIEKIDKPRLIKIQLGAQIIAEPEVLETGLNSGVPLDWGDMK
ITGSSIAVRN*
back to top

mRNA from alignment at P-littoralis_Contig77:250639..260910+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig77.69.1 ID=mRNA_P-littoralis_Contig77.69.1|Name=mRNA_P-littoralis_Contig77.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10272bp|location=Sequence derived from alignment at P-littoralis_Contig77:250639..260910+ (Pylaiella littoralis U1_48)
ATGGCTTCCCGTCAACGGGAACGGGTGGGTGCCGGGCAAACAACTAACTT CGCCATACCGGCCCGTGCGGTTGGGCCGTTTTCGACGCGGTCGCACACGA GCTTACCGCGAGCGCGGGCCCAGACGGCTGCCACCCCGCAACCCGATCGG TTTCAAGGCAGTCGAGTCTCTCGCCGGTCAATGACGGCAAGCTCTAGGCG CGGCAGCTCTCGTCCGCGAGGTGGTCATGGTAAGCTTTGATGTGATTAAG TTAGTCGGGGATGGCGGCAGAAAACGGCGTGGTCTTGTGTGATACTGATT AATTGTTACATTTTGCAAACAAAATCACTGGAACTTTACCATGTGATATG CTGTTGTAATGAACAGGTACCTGATACGATACGTATGCGCCCAAACGCAG TAGTTGTACCCTTCTAGTATTACCCTATGCGAGACTATGTGTGCAAGTAC CTTTGTGCATACTCGACAATATCGTCCGACAACAGTCAGAGTTTATCTCA GCACTTTCTCTCTCCGTTTTTTGCCTTCTCTCGTCAGCGGGCAGTTCGCA CCCCAGGCAAGGCATGTTCCTTCCACACCCACAGGCTCCATACGAAGCAA GCGAAAGCAACAAGTTTTACACTGCCTCACCGGTGTGTACGCTCAGTAGA ATATTCTCGGACTCCAGCCTTATCCAGCCTGCTTGGTCGAAAGTGGCGAC ATCTCCGTGGGGGGAAGCTGCAAGAGTTTCCGGGGGGTACGGCGAACGAC TTCTTAACGGAGCTAACTCGGTGGAGTCTCCAGACTTCATGTTTAGCAAG GTGAGCGCATTTTCTAACGTACCCAGAGTAAATTGAAGCAAACGCAGTAG TGCACATCTTCGTTTTCTATGTACAGTTTCGGAGTCGAGCTCTGATTTTT CAGATTTAGAAATAAGACTCTCAGATTTAAGCGGCGATCCACAGACCAGC CCTGAAGGCGAGCAGTTTCAGGTGTAAGCGGAGCTGATTTGACCTGTAGG GCCAGGCGATTGCAGGTGGGTACACGTGCGATGAGGGATGGGTTCAGACA AAATGTAATATGGGTCACAGACGACACCGCCGCTGATATCTCCGCGTAGG GAGCAGCTTTAAAGATGACGCTTTCGATGCTGTATACACCATGATGCTGA CCATTCTTGGGTTCCACCTCCATGGCGTTGGGGTGGCGTTCGCATGTTTT GTTGTGGAAAGCCATGCGCCTGCAATGATCGAGGTCGGGGAGTTTCTGGT TTTTTCGATGAGTCCATTTTGAGAGAACAAAGACAGACACAGCAGATAGA TAGGCGTGCCATCACAACCGATCTCTCCATCACAGGAAGAGTAAGTCGCA CATCACCGATACCGCTGCACCACGGTGGGTCGCTATCACATGTAGCTGAT CTCTTTAGCTTCTTCCTGCAGGGAGAGAGCATGCGGTGTGGGCCCTCTGT CTTGTGTCTCACAAAAACAAAAGCAGTGTTGTTGCTTTGTTTTGTCCACC ATGGGTAATGCTGTTGTTGCTGCGCTCTGTCGTGTGCTTGTGCTCTCTGT CCCCTGTACTGACTGGTGTCCAAAGAGACAGCAGTCTTCGTGCGTACAGT CACCAGTAAGACGCAGCATCATCATCATCATCTGTATCTGATGTCATAGC AGGAGGAGGTCGAGACTTGGGCAAGGCAGTAGCAGCAGAAGATATGATCT ACAGCAAGCAGTAGGAGACAGCCTGATCAATAGTACAGCACAGCGGTGGC TATATACACGTACGTGGGCCTGCCGAGAGTGCCTCAGCCACGAAACCTTG GGCTATGGTGTTCGAGCAGGTTGTCACTGAAGCATTCTGCATGGCTAGAG TGGGGCCAGTGCATGCCTGGTGGCCTACTGTAGTTGTTCCCCGTGACGCT TATTTCTAAGAGCGAGAGGAGGAGAGGAGATCATTTATAAACAAGCTCCC ACATTCTGCTCAGTTCTAAATCTGAAAGCGAGCTCTCGGAAATAAGACGG AACTGTCAGCCCCGTTCAGGGGTACGATCCTTATTTCCAAATCTGAAAGC CTAATTCTGAAACTTTTTCCCACTCCGAAACAGTCTTTTAAGAATACCTG GTAGATTTCTCTACGCGACAAAATGATGTCGATCATCGTGCGCATCGCCG GGCGGTTTGGACCTTTCGGGTTCAGAATCCAAGATTGAGGCCATGTGCGT GCTCACTTAAGGGATGAAGGTGTGCCCGTACACGGTCAACACTTCCGGGA TGGTTCAAACAAACGGACGAGTGTGTGTTTCGAGCGGGAAACATCTGCAA GGACGAGAGCGTGGACGATGAGTTTACCCACCGAGTGCAGCGAGCGCATG ACTGCTTCGGGCGCAACGGCCACAGGCGATGTACGATCGTTGGGTAGGGG GGCTTCGACTCAAGGTACAACCGTTCCAAGCCGGAGTCGCGGAGACCCTG CTCTACGCGAGTGAGAGATATGGACCCTAAAGTCAATCAACTACGCCGAA CTCCGGACAACTCACCACCTCTTCCTCTTTCGCTACATCGGATGGAAAGA GAGAAATAGGCCGGATCGCCTCATGTCCTCGCCGAGGCACTCACCAAAAC GGGCTTCGACGAGTGCATCGAGACTACCGTGCGCAAGCGCCTACACTTCG CGAAATCCGTCAAGTGTATAGGAGACAACAGATCCCCGAGGATTTCCCCC TTGGGAGAATTAGAAGGGGGCGTGAGCTACACGTGGGGCAGGAGTTTGAC TGACTGAGGCCACTACGTGTGAAGATCTCGTAGCGTTCGGCATCGTAACC GAAAATAAGGGGTGGGAAGCGAGCGCCAAGAGAGCGGAGGAATGGCACGA AAGGATCGAGGTGGGGGTGCAGTTGGTTCCTGGACAAGTGGTCCAAAAAA GAGGGAGACGCCAAGGAGACACGCCGACTGAAGAGGGATTCGGGAGCGGT GGAGAACCACGTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGATAACGACGAAAAGATACGGGAGGAGAACACGGTGACCGAAGGAGGGA GATAAACCCCTCGAGCAAACGGCGGCGTGTTGATCCACGAGGGGGAGATA AGCCTTTCGAGCGGCATGGTTGTGTGCTTGGCAAAGCTGCAGGGCAAAAC AACTGTAGAGCAGAAGTCAAGGTGCAATATTGTGGTGCGAGGGACGGAAG GCATGAGTGCGATGGGGAAGAACGAGAGCTCGAGCGGGCAGGCCGTCTGG CGAGACATGTTTCTGTACCGATTCCGTGTCTCTCTTCTTCTAATAAATAC GAAGTATTATATATAGCGATCTAGGGGTATAAGGGTCGAAGTAGAACACA CACCCTCGGCTGCTCCCCAGCCGGGGTCACCCAACCTAGTGGGTCCCTCG TGGACACACCGGGCTCTACCAAAGTAGACAGGGTAGTGTGGGAGTGGTAG CGTGGGAGTGGTAGTGTGGGAGTGGTGTGGTCAGACCCTACTCGGCGCAC GCCGAGGCTGGGTAGGTGATGGAGGTGACGAATGGCACTACAGCAGTCCG GACCAACTATGGTCCGGTCTCCGCGACAGTCAAACTGTCTGCGGCAGCTG TGTCGACACATCACCGCGGAAATCGTGGAACTCGTAGCCTGAGGAGTAGA GAGACTAGGAGGCACCACGTTAGTAAGCACCCTCGTCGACCTTCACGTCG ACGCTGGCCGGGAGTGTCGTCCCCAGCCCGCCTGAACGTAGACAAGTACC GAGCTTGGCAAAGATGGATGGAACGGAGGAAAATTGCAGCTCGAAAGAAA CGGAAGCGAAACCGACCTTTACGCAAGGCTGACCGAAAGAGACGGGCAGA GATGAGAACAAAGGCATGTGCAGGCGAACTGGCAGTGGGCTCCTTCAACG TCCGCACCCTTGCTTACAAGGGCGCCAACGGTATCGGCCACAACTCCAAC ACCGTACTACAGCTCTGTGGTAGCTCCGATTGCGATGTGGTTGGCCTCCA GGAAACCCGGCGTGCTAATGATGGTACCTTCACACACGCGGGATATGTTG TGATCTGGAGTGGAGCACGTGCCGGGACCACCGAGAAGAAAGGAGTGCAC GGGGTCGGGTTGGCTATCAAGCAGTCCATCGTGGATGGGATGGACAAAGG AGGTATGACGGTGGAGTGCATTAGCTCAAGACTGATAAAGGTACGCCTGC AACTCACTGGCTCGAACGGTGTATCCTTTGTGGTTGCCTATGCACCCACC GAGACGGATGGGACTAGTGAGAAAGATGGATTCTGGCTGTCAGTGAGAGA GACAGTCAATGCAGTACCTAGCAGGGAACACGTCGTGGTGATGATGGATG CGAACGCTCGAACTGGTAGAAGAGAGGATGAGAGTACCCCTGATAAGGTG ATGGGCATGTACGGGCGTGACAAGCGGAACGATAACGGGCGGAGACTGGT GGAATTTGCAGCAAGCTGTAGGCTTTCCATCCTGGACACCTTTTTCTGCA AACCCAAAGGCGGGATATCACACTCGTTCAAAAGCTCCAACCGCGGGAAG GGAGAATACTGACTCGATTACATCCTGACCCGCCAGGCAGACCTTCGGTT GGTGCGCAACGTCTCTGTACGGCGCATCGATCGTAAGGATTCCGACCACA ACCTCATCCTTGCCAACATCCGCTTGGCCGAGTGGCACCGAATCGACGTG TGAGGGGTAGCAGCAGCCGTACCTCCGCTAGCATCGATCTACAACGGTTG ATGGCGGACCCCCAACTTCGGAAAGACTTTAGAGACAGAATTTCCCCCAT CATGGAAGGTGCGAATGTGGATGAGCTCGCGTCGGCCTTGACGACTGCTG TGCTGTCCACCGCCGCTGACGTTGCCCCCCGGGCCAAGGGCAAGAGATTG CCAAGTGGCTGGTGCGCCAGTGAGGAAGTGCAGCAGGAGATCCACGTGGC ATGACTCAAGAGGGAGGACGCCCGGAAGCAGCTTCGCGGTGCGCCGAAAG ATCCCACCCTCAGGAGCAACCTCAAGGCGGCCGGGAAGCACCTTGATCGA CTTAGAGCCAGTGCTGTGAATGAGTTCTTCGATGGATTTGTGAGTCAACT CGAGAAGAAAAGCCGCGAAGGGGACCAGGCCGGTTTCTACAAGCACATGA AGGGATTGGATGTGGAGGGGAAGAGGGCCTTCACCTCACAGAACATCAAG GACGAGGATGGAAATCTTTTTCGGGACCCCGCACTTATCCTCGAGCGGTG GGCCAGGTGGTTCCATGCTCTGCTCAACACCAAGTCACCGACCATGGATC CGAGAGTTGTGGACAAGATCGAGCCCTGGCCTCCGTGCGTACCGCTTGAT GACGTCCCTTCGCTGTTTGAGGTTGAGGAAGCAATCCGGGGAATGGCCAA CAGGAAAGCTGTGGGCCCGGACGAGCTACCGGCGGAGCTTATCAAGCTCT TCCTTGACGGAGACCAAGTCCTCCTACGGCAGTTCTACAGTATCATCAAC ATCTGGCAATCGGGAAGGGTGCTACAGCAGTGGAAAGATGCTTCGATCAA GGTGCTGCACAAGAAGGACAAGACGGAATGCGGCAATTACCGAGGCATCT CCCTTGTGGCCCACGCTGGCAAGGTACTCTTGAAGCTGATCGCCACCCGG CTAAGCGATTACTGCGAAAGAGAGGGCATCCTGCCGGAGGAACAGAGCGG TTTCCGACCAAACCGCTCAACGGTTGACATGATGTTCGTGGTTCGACGCC TACACGAGCTTGCGCGGAAGAAGTCAACCCCACTGTACGCCTGCTTTATC GATCTCACGAAAGCCTAAGACTCCGTAGACCGGGCACTACTGTGGTCGGT GCTCAAGCGGCTTGGAGTGCCCCCCAAGATGCTTGCGGTCATTCGCCAAT TCCACGACGGAATGAGAGAATGCGTACGGATGGACGACGGGAGGTGCTCC GACTGGTTTGATGTGGGGCAGGGACTCCGACAGGGATGCAGTCTGGCACC CCTGCTGTTCAACCTTTTCTTTGCTGCGATGCTCATGGTGGCCTTTGCCG AGATCAGCAAGGACGCGGAGGTGATGGCGGACATGGCCAAGGTCAAGAGG AAGGTGACGAAGCGACGGGGAGGAGCGCCCGACTGGTGGAGGCAGTAAAG TCCATCTGGAGTATGCTCTACGCCGACGACGCCTGTATTGTATCTCAATC ACCTGGGAGCCTTGAGAAGATGATGTCGATCATCGTACGTGTGGCCGAGC GGTTTGGCCTGTTGGTGTCAGAACCCAAGACGGAGACCATGTGTATGCTC GCGAAAGGGATGGAGGCGTGCTCGTTCACGATCGACGCTGCCGGGATGGT CTTCAAGCAGAAGAACGACTTTATGTATCTCGGGGGTAAGATTTGTGAGG ACGGTAGCATTGAGGGCGAGATTAACCACCGAGTGCAGCGAGCGCACGCC TGCTTCCGGCGCAACAGCCAGGCAATGTACGACCGCCCGGGGGCCCCTCT TCGACTCAAAGTACGACTCCTCCAAGCTGAAGTCGTGGAGACCCTACTCT ACGGGTGTGTCACATGGAATCTGAAGCCAGCGGAGTACCGCAAGCTTCGG TCAGCCCACCACTTCTTCCTCCTTCGCTGCATCGGATGGAAAAAGAGGGA GAGAACAGACCGACCCCTCTCCTACGCCAAAGCCCTGATCACCGCGGGTT GCGACGAGAGCGTTGAGGTCACCGTGCGCAAGCGGCGACTGTGCTTCGCA GGATTCGTTGCGCGCATGAGAGACGAGAGACTCCCGAAAATTTGCTCTTT TGGGAGAATTGCAGGGGGGAACGAGGTATCTGGGGGGGCAAGAGTTTGAC TGGCTGAGGCGAATGCAGGAGGACCTCGAAGCGTTCGACATCGTGGTCGA CAAAAAAGAGGGGTGGGAGGCAAGTGCCAAGAGAGCTGACGAGTGGTACG ACAGGATCGACGAGGGTGCGCGGCGGTTCACGGACGAGTGGCTCAAGAAA GAGGGAGACTTATCAGAGACACGTCGACGGAAAAGGGAGAGGGACGCGGC TGAGGGGCAGGCCTTGACCAAAAGAGGGAGAACGGATGGCGGGGATACAC GAGAGGAGGGGTACGGGGGGGCACAAGGGCAGCGGGGTAGTGGGGTTAGA GTTGCACAGCACAAGAAGAAGCAGTCCAAAGCCAAGCTACGGGGTGGCCG GAGTGGAAAACCTGTAGGGCGGAATTGTGGTGTAGCTGCTGCCAAAGATG TGGGGCAGAAACAACTGGATACGGTGGTGCCAGTAGCAGGAGGCATGAGT GCGACTGAGGAGAGCAAGCGTGAACAGGCAGACCTCGTGGCAAGACATGT TTGCGATTGATTGCATGCCTTTTATTTTATTTTTATCATCTCCCCCCCCC CCCCGACTTCCGGTACTTCCGGTCTTCTTTTCCCTTTTCGTTCCCCTGCT TCCTCTTTGTTTGGCGGCCTGTTTGTTGTGTTTGTGTACGAATGCACTCC TTCAGTCTTTGTGCCCTCCCTGTATCTTCTTCTTTTTTATTTTATTTTTT GTCTTTCGTCTATTGATCTTATAGTTACTTGGACCATTGCCCTGGTTTGC GTTTGCCTTGGTCTGTCATGGCCCTGGGCCCTGGTTCGATGTACGAAGTA CTTCGAAGTATATAGTTATGGTTGAGGTTTGTCTTGGTTATTTTTTGTTT GTCGGACTGTTTCCAATTTTTGTTTTTCTTTCAAGCCTGTTATTTTATTC TGTATTTCGTTTGGTACTCTGGCCACCACAGATGGTACCCCAACGGTACC ATATCTGATTTGACTGTGGGTGATCATAGTCCATATATTTTATTTTTATT TTATTTTTATTTTATTTATTTTTTTCCTCCTAGCACGATATGTGCCTGGT TTGTGACCACGGGCTAGACTGCGGCGGTAGTGAGCTAATGTGAGAATCAA CAACAACAACAACAACAACAACAACAACAACAACAATATGTGTCGTCTGT GTGCTTCTTTCATACCACGTGTTTTAGTCCTCTTTTTTGTTCGATTTTTT TACGTATTTGTGTTTGTATTTTCAGCCACCATTAAAGATGCTCCCCTTCT CGCCGTATCCCTGGTATGTGGAGTCTCGTTCGTTTCAGTCATTGCTCATT TTGGCAATGAGTTGACGTAAAATCAAGCAGATTTAACAGCAACGACAACT TTTGTAGAAAGTCGGAAGGGCCGATACGGTACGAAAAAAAAACGAATGGC AAAGGGCTACTCTCTTTACCACTCTTTCGACAAAGGCGTCACATGCTGCT GTAGGCCATGTGAATTGTACAAGTATTGCACGAATGCCGCATGTCTTTGT TGTGCTCTCGGTATTGGCATACTTCGTCGTCTGCCATATATAACATGGTA CCTGCCGAGCCTTTAATATTGATCTTTTCAATCCGCAAATGGTGCTCTCT TCTACTTCTTCGAGCTAGGGCGTGTTCTCATCTACCCTATATCTGCTATT GTTGTTCGGCTCCGCGAGCAGAGATTTCCCGGACACGTGAAGGATTTCAG CTTCAAGAAGAGGACACGGCCCTTCGCGTACGGTGGTGAGGCCAACACGG CTGTATCCTACGACACGCCCAACTTCTTCCGCACCCGCCACACGCAGGTT AGGGCACGCAGTGTTCACGCCGGGCGGCTTCTTGCTCGCGGGTTGCCAAT AGTTTGGGTTGGTTTACACTGTAGTCTCACGTAATGACGCATTTTTGTCG TGTCGGCGCGCTGTAGGTGAAGCCTTTCTCGAGCCCGTCATGGGCTATCG CATTACGTGATACGTCATGAAAATCTATGGCAGCGAGAAGTAATTATGAT GATGAGCGCCAAGAACCCTATATTGAATCATTTTGTGTCAGATTCGAAGG GTAAGCGTCGCTAAGACTTACTGCGTGCCCGATATTGTACGAGGTATTTC AAAGTCTAGGCCGAAAAATAACGTTTTTTGGATTCTCGTGTTTTCAAGCG ATACATCATAGCGAGAGGGCTTGCTTCGAGGACAATTACATTTGATCATC GCGTGCAATAATTTGAGATTTTGTGCTTTTGAGAAGCTAGAGCTGAAGCC AAGCTCAATTCCACAAAAAATCTGCTGTCGTCAGGCATACTAAGAGCCCA GGACCAGTTCTTGGTGGAACACCATTCATGCTATCCATGGAACCTCAAAA TTATCTTTGTCATCCCAACAGTAACACACGCCTAAGTGACAGATGCTACC AAAATGATGCCGAAGCGGATGTTTGGGGTTTTGCTACAAGCTGCAGTCGA TCTTCCGTGCTCTGCGGGGGGCCTGAGGGTCGGAAAATCGCCCGTTTTGT ATTTTTCCTGCTGTTCCCTCGGAGTATTGGGAACTTCACAAAACACCAAG AATAATTAGACGAAGAAACAAAGCACGGAAGGGAGGGAGGAAGGAGAAAC ACCGTGTTCTGTCCCTGTGCATCCCCTATGTTGCGGGATGAAGGAAAATG ATTCGTAAACTTTTCGATTAACCCTCCAAGCCCACACACGTGCATGTGTG TCTGTTCTGGTCACAAATATCTTCAAGCGGCACAAACGGATGCTCACTCT TCTCGTCTCTCGCACGATGGGGATGGGGTGGGTGTTTCACGTGCAATCGC AGGTGTACGGACGACCAATCGAGAAGATCGACAAGCCCCGCTTGATTAAG ATCCAGCTAGGAGCACAGGTATGGCGGGTATGGCGAACAGCCACTGAGCT GTAACACCTGATTATTGAGTTAATGAAATAAACGGAGCTACGTCGGGGTT TGGGAGATACCGTGAAAACAGGGCTTGACGAGATGCGAACGGTTTCTGGC GTTTCTCGATATGTTCCCGGTGCAATATTTTGACCTCACGAGTGCCACGC GCTCTCCACACCATGCAACCGAGGCTTTTGCCTGGAGTTCAATCTCCAAT CTTACGGTAGCCAGAAGGCGGTAAAACAGCCATTGCCTTCAATGCAGTTT CAATGGTGGGATAGCGACGATGCTCCTCCTGATGACCAAATGGGTCGACG CTCGATGCAGACACTAATCCGGTTGGGCAGGCTTGTGTTCAAAACCTCTT CCCGCAATGAGATGTGTTTGCCGACCTTTTCTCGTGCGTCCCGCGTTGAC ACGTTATTACCCCATAGATCATCGCTGAGCCTGAAGTCCTAGAGACGGGC CTCAACAGCGGCGTGCCTTTGGATTGGGGTGACATGAAAATCACAGGCTC GAGCATAGCGGTTCGAAACTAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig77:250639..260910+

>mRNA_P-littoralis_Contig77.69.1 ID=mRNA_P-littoralis_Contig77.69.1|Name=mRNA_P-littoralis_Contig77.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=783bp|location=Sequence derived from alignment at P-littoralis_Contig77:250639..260910+ (Pylaiella littoralis U1_48)
ATGGCTTCCCGTCAACGGGAACGGGTGGGTGCCGGGCAAACAACTAACTT
CGCCATACCGGCCCGTGCGGTTGGGCCGTTTTCGACGCGGTCGCACACGA
GCTTACCGCGAGCGCGGGCCCAGACGGCTGCCACCCCGCAACCCGATCGG
TTTCAAGGCAGTCGAGTCTCTCGCCGGTCAATGACGGCAAGCTCTAGGCG
CGGCAGCTCTCGTCCGCGAGGTGCGGGCAGTTCGCACCCCAGGCAAGGCA
TGTTCCTTCCACACCCACAGGCTCCATACGAAGCAAGCGAAAGCAACAAG
TTTTACACTGCCTCACCGGTGTGTACGCTCAGTAGAATATTCTCGGACTC
CAGCCTTATCCAGCCTGCTTGGTCGAAAGTGGCGACATCTCCGTGGGGGG
AAGCTGCAAGAGTTTCCGGGGGGTACGGCGAACGACTTCTTAACGGAGCT
AACTCGGTGGAGTCTCCAGACTTCATGTTTAGCAAGAGATTTCCCGGACA
CGTGAAGGATTTCAGCTTCAAGAAGAGGACACGGCCCTTCGCGTACGGTG
GTGAGGCCAACACGGCTGTATCCTACGACACGCCCAACTTCTTCCGCACC
CGCCACACGCAGGTGTACGGACGACCAATCGAGAAGATCGACAAGCCCCG
CTTGATTAAGATCCAGCTAGGAGCACAGATCATCGCTGAGCCTGAAGTCC
TAGAGACGGGCCTCAACAGCGGCGTGCCTTTGGATTGGGGTGACATGAAA
ATCACAGGCTCGAGCATAGCGGTTCGAAACTAG
back to top