prot_P-littoralis_Contig77.69.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.69.1
Unique Nameprot_P-littoralis_Contig77.69.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length261
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig77.69.1 vs. uniprot
Match: D7G706_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G706_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 8.990e-68
Identity = 135/234 (57.69%), Postives = 150/234 (64.10%), Query Frame = 0 
Query:   27 FSTRSHTSLPRARAQTAATPQPDRFQGSRVSRRSMTASSRR--GSSRPRGAGSSHPRQGMFLPHPQAPYEASESNKFYTASPVCTLSRIFSDSSLIQPAWSKVATSPWGEAARVSGGYGERLLNGANSVESPDFMFSKRFPGHVKDFSFKKRTRPFAYGGEANTAVSYDTPNFFRTRHTQVYGRPIEKIDKPRLIKIQLGAQIIAEPEVLETGLNSGVPLDWGDMKITGSSIAV 258
             STRS T  P+ARAQTA  PQPDR +  R + R+ TA SR    SSR RG      R G+FLP  Q  +EA E++KFYTASPVCTLSRIFSDSSLIQP+W KVATSPWGEAARV+GGYGERLLNGANSVESPDFM SK                                          VYGRPIEKIDKPRL+K+ LG QIIAEPEV ET L  G PLDWG M +TGS ++V
Sbjct:    1 MSTRSQTHWPQARAQTANLPQPDRTRSERGTLRATTARSRARDASSRRRGDA----RSGIFLP--QVKFEADENSKFYTASPVCTLSRIFSDSSLIQPSWPKVATSPWGEAARVTGGYGERLLNGANSVESPDFMLSK------------------------------------------VYGRPIEKIDKPRLLKMHLGKQIIAEPEVPETDLAGG-PLDWGGMAVTGSGVSV 185
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G706_ECTSI8.990e-6857.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:250639..260910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.69.1mRNA_P-littoralis_Contig77.69.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 250639..260910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.69.1 ID=prot_P-littoralis_Contig77.69.1|Name=mRNA_P-littoralis_Contig77.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp
MASRQRERVGAGQTTNFAIPARAVGPFSTRSHTSLPRARAQTAATPQPDR
FQGSRVSRRSMTASSRRGSSRPRGAGSSHPRQGMFLPHPQAPYEASESNK
FYTASPVCTLSRIFSDSSLIQPAWSKVATSPWGEAARVSGGYGERLLNGA
NSVESPDFMFSKRFPGHVKDFSFKKRTRPFAYGGEANTAVSYDTPNFFRT
RHTQVYGRPIEKIDKPRLIKIQLGAQIIAEPEVLETGLNSGVPLDWGDMK
ITGSSIAVRN*
back to top