prot_P-littoralis_Contig1192.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1192.6.1
Unique Nameprot_P-littoralis_Contig1192.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length139
Homology
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BLAST of mRNA_P-littoralis_Contig1192.6.1 vs. uniprot
Match: A0A6H5JXC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC0_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.780e-18
Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 0 
Query:   23 RLATPLIAASVSFRCEHVEGFFQSTKRELVSFGASQFCQNELRAQVDVSSAYYAELIARGYVSDTGGSRPLGEDIVEDMRSVRLKLNIINDTPTARYIER 122
            RLATP I   V+FR + VE FFQ  K+EL++ GASQ+CQ E+RAQVD   +Y  EL+  G V + G   PL +D    +R++RLKLNI+   P    +ER
Sbjct:  189 RLATPPITPGVAFRDKLVEEFFQPVKQELLACGASQYCQKEIRAQVDGLESYDVELVTSGNVDEDGQPLPLHDDDFVQIRNLRLKLNILQVAPPDTDLER 288
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BLAST of mRNA_P-littoralis_Contig1192.6.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.470e-15
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 0 
Query:   23 RLATPLIAASVSFRCEHVEGFFQSTKRELVSFGASQFCQNELRAQVDVSSAYYAELIARGYVSDTGGSRPLGEDIVEDMRSVRLKLNIINDTPTARYIERHQRGADV 129
            RLATP + A V+F   HVE FF+  K+EL++ GASQ+CQ     QVD + +Y AEL++ G V + G   P  E+ +  +RS+RLKLN++   P    +E  Q   + 
Sbjct:  817 RLATPPLGAGVAFGDIHVENFFRPVKQELLACGASQYCQ-----QVDEAQSYDAELVSSGRVEENGDPLPFHENDLAKIRSLRLKLNVLQVAPPDTDLEGDQLAGEA 918
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1192.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXC0_9PHAE1.780e-1848.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBY4_9PHAE3.470e-1541.12SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1192contigP-littoralis_Contig1192:39894..40978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1192.6.1mRNA_P-littoralis_Contig1192.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1192 39232..41514 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1192.6.1 ID=prot_P-littoralis_Contig1192.6.1|Name=mRNA_P-littoralis_Contig1192.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp
MDSDVQDPSRHELKEAGHGTLRRLATPLIAASVSFRCEHVEGFFQSTKRE
LVSFGASQFCQNELRAQVDVSSAYYAELIARGYVSDTGGSRPLGEDIVED
MRSVRLKLNIINDTPTARYIERHQRGADVFACLFGANH*
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