prot_P-littoralis_Contig76.190.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 1048 bits (2710), Expect = 0.000e+0 Identity = 736/1015 (72.51%), Postives = 778/1015 (76.65%), Query Frame = 0
Query: 1 MTQPPDPAKLAGDLSQRIINHGDALAG--PGKPPLKLLKWALGQLEECARTRSVPPSNVVDVAMEAIKEEIGVHP-LKPPPAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKGKVVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGG--------ISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREITRAREIEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVKVPVRVPLAGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVASLFSKYSKPQHLMFGYYDPQVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMQEAGAAMQEGTRGGKNKLQQDSGKRRHRGDFGSGNEEAEAADGAGGDVDGGQTPPXXXXXXXXXXXXXRQREPVVDALRAGAGEGKESAFFQDSGAVPTKLEQEYQELEVLCRVVYVDSQGLSDSRSVKHTVVHLAPKMLIVMGGSARAKRELVLHVRNQLEQXXXXXXXXXXXXXXXXXXXXPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXECRFVVVDKAMERLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRVDSRGDTPLLCAKPRGEKVGHPAMFLSLGNVNI 1004
M QP D A+LA DLS+R++NH A A PGK PLKLL+WAL QLEECARTRSVP SNVV+VAM AIK+E+GV + PPAA A XXXXXXXXXXXXXXXX RSKGKVVFTPLYGC+EG TGV PVSSILEVGGVTILLDCGWDI FDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAY+SR HEGNFQAFDLDDVD AFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYN++ ERHLR SAL TL RPSVLITDAHN+ TGG R RE +LISTVMDTVRGGGNVLLPTDTAGRVLELLVLL+++WQKHRLGSYKLVLLHNTAFNT EFAK LEWMSE+IG+AFDLQRSNPFELRNVHIMHSLEELD+LG+DPKVV+ATDMSLD+GFSKALL+RWASGGANTILLTG GHG+TTAR L + R+ EA XXXXXXXXXXXXXXXXXXXXXXXXXXXX V VPVRVPLAGEEL+AFR+E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AIVASLFSKYSKPQHLMFGYYDP VPTDEYGVKETEPIGWLAAAMQQQNSEMPAAM XXXXXXXXXXXXX EPVVDALRA AGEGKESAFFQDSGAVPTKLEQE QELEVLCRVVYVDS+GLSD SVK+T V LAPKMLIV GGS RAK ELV +VR+ +E XXXXXXXXXXXXX XXXXXXXXXXXX CRFVVV+KAME +PVALDSGAFDVLLHDSLHT LKWKQL+NYGVAH+ECRVD RGD PLLCAKPR E+VGHPAMFLS+G VN+
Sbjct: 1 MAQPLDAARLAHDLSKRMMNHHGATAAAVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDEMGVPAGEQQPPAAGVAAHPASAPRTSGSAVDGSSSXXXXXXXXXXXXXXXX---------RSKGKVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQ---LEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVP-----VTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRR-AIVASLFSKYSKPQHLMFGYYDPHVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVRHAVEPAAAGRRAXXXXXXXXXXXXX----------------XXXXXXXXXXXXDVACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLDNYGVAHVECRVDPRGDVPLLCAKPRAERVGHPAMFLSVGKVNV 972
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 620 bits (1598), Expect = 1.300e-204 Identity = 419/959 (43.69%), Postives = 530/959 (55.27%), Query Frame = 0
Query: 133 VVFTPLYGC-EEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGN--FQAFDLDDVDTAFARFKTLKFSQHLTFS--GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHN----SPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREITRAREIEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVKVPVRVPLAGEELRAFREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIV-ASLFSKYSKPQHLMFGYYDPQVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMQEAGAAMQEGTRGGKNKLQQDSGKRRHRGDFGSGNEEAEAADGAGGDVDGGQTPPXXXXXXXXXXXXXRQREPVVDALRAGAGEG--KESAFFQDSGAVPTKLEQEYQELEVLCRVVYVDSQGLSDSRSVKHTVVHLAPKMLIVMGGSARAKRELVLHVRNQLEQXXXXXXXXXXXXXXXXXXXXPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXECRFVVVDKAMERLPVALDSGAFDVLLHDSLHTQLKWKQLNNYGVAHMECRVD------------SRGDTPLLCAKPRGEK--VGHPAMFLSLGNVNIVQLQKSLEKAGVSVKFLSGTLRCEGGVTVSPGKDGKMELEGPLCDAYFRVREIMYRQYVIV 1065
V FTPLYGC ++ G G GPV S+LEVG VTILLDCGWDI FD +LL PL VV R+DLVLISH DLEHLGGLPYA GKLG++A V+ATLP KMGQM VYDA+ R E N F+AF LDD D AF RF+ LK+SQHL FS GRGAGVTITPYAAG +IG ++WR+ WQT+DNDIVYA +YNH RE HL A+ TL+RPS++ITDAH P R + T++++ TVR GGNVLLP DTAGRVLELL+LLD HW +++LGSY LVLLH+ AFNT EFAK LEWMS+ I K FDLQRSNPFE+R+V + HSLEEL LG P VVLATD+SLD+GF+KALL+ WA+ N +LLT GHG + AREL A A V+VP RVPL GEEL A+ EEXXXXXXXXXXXXXXXXX XXXXXXXXXX +V ASLFSK+SKPQHLMFG++D V D+YGV+E EPI WLA +MQ++N +G +EG R L+Q +A AA + V A A A +SAF++D+G +P+K+ + +EL V RV Y+D +GLSD RSV++ + + P+ L+++GGS +A L R++ C V ++ + + ALD+ FDVL+HDSL+T+L+W+ + Y +A ++ V R P+L E+ G PA+F+S G+V + QL +L KAG++ + L G + V+ G DG ++++GPL D YF VR IMYRQY IV
Sbjct: 48 VTFTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTA---TVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQ---LEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELLRGVTAHVRAAAAAGGVEEAPKQRIV----------------------------------------------------VEVPERVPLVGEELTAYLEEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHDAMVEVDDYGVREAEPIAWLAVSMQERNDT-------SGLIHEEGQR---RLLEQ----------------QATAA----------------HLSSAMQVVGLSDADGAVSAATAAAQTALRSDSAFYEDTGVLPSKVVLQERELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSEDARDR----------------------------------------------------HICSAVFTPRSGDTVRAALDTDVFDVLVHDSLYTRLRWQSVKGYELAQVDSAVAPQPRPSGVLGKRERPPPPILFPPQDREEGETGRPAVFVSFGDVQLTQLSTALRKAGMTTALAAAKLTVSGTIVVTKGADGLLKIDGPLSDTYFAVRSIMYRQYTIV 854
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: A0A7S0N1Z8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1Z8_9CHLO) HSP 1 Score: 345 bits (884), Expect = 7.800e-105 Identity = 189/383 (49.35%), Postives = 252/383 (65.80%), Query Frame = 0
Query: 132 KVVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQH--LTFS-GRG--AGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREITRA 509
++ FTPL G P+S +LE+ ILLDCGW+ + D A ++P+ + V ID VL+SH D HLG LPY GK G++A VYATLPV KMGQM +YD YLSR + AFDLDDVD AFA LK+SQH LT S GR A VT+TPY AG ++G +W++S +TED +VYA +NH +ERHL + L + NRPS+LITDA N+ +R AR+ +L TV +RGGG+VL+P DTAGRVLEL++ L+++W +L SYKLVLL N A+NT EFAK +EWM++ I FD R+N F+ R++H+ HS+EEL LG PK+V+A+ SL+ G ++ L V WA+ N +L MG +T ARE+ T A
Sbjct: 6 RIQFTPLNGAHS----ETPLSYLLEIDDFKILLDCGWNDKLDLADIQPIVDRVPEIDAVLLSHSDTTHLGALPYLVGKKGLKAPVYATLPVHKMGQMYMYDHYLSRQAGEDQTAFDLDDVDAAFALITPLKYSQHVHLTASHGRSTSAAVTVTPYNAGHLLGGTLWKISKETED--VVYAVDFNHKKERHLNGTVLESFNRPSLLITDAFNAANRPPARAARDKELTDTVAKVLRGGGSVLIPIDTAGRVLELVLHLEQYWTVAKLASYKLVLLTNVAYNTMEFAK---SHIEWMNDAISTTFDQTRTNAFKTRHLHLCHSVEELAGLGPGPKLVMASMQSLEVGPARELFVTWATNPRNLLLFPDMGQPNTLAREVMRCTAA 379
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC) HSP 1 Score: 356 bits (913), Expect = 1.380e-104 Identity = 187/377 (49.60%), Postives = 252/377 (66.84%), Query Frame = 0
Query: 132 KVVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREITR 508
++ F+PLYG + G G P +L++ G ILLDCGW+ FD LLEPL +V +D VLISHPD EHLG LPYAFGKLGMR KVYATLPV KMG M +YD +LSR +F+ F LDD+DTAF+ F ++++Q G GAG+TITPYAAG M+G A+W+V +T+D +VYA +NH RE+HL + L ++ RP+VLITDA N+ S+T RE LI ++ TVR GNVL+P D AGRVLELL++L+E W + +L +Y+LVLL A+NT EFA+ LEWM E +G+ FD +R N F R++ + HS++E L PKVVLA+ SLD G S+ + V WA N I+ T + +RE+ +++
Sbjct: 7 RIKFSPLYGVQ--GIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNARRLPPSKT-RENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFAR---SHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDRLQPGSLSREVCRLSQ 375
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO) HSP 1 Score: 348 bits (894), Expect = 1.130e-102 Identity = 181/379 (47.76%), Postives = 246/379 (64.91%), Query Frame = 0
Query: 135 FTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREITRAREIE 513
F PL G G P+ +LEV LLDCGWD + + L+ L V+++D VL+SH D +HLG LPYA GKLG+ VYATLPV KMGQM +YD YLS+ E ++ F+L+DVD AF F ++++Q + +G+G G+TITP+ AG +G WR++ + ED I+YA YNH +ERHL +AL T NRP+VLITDA+N T SR R+ L++ VM T+R GGNVL+P DTA RVLELL++LD HW+ ++G Y LVLL+N A+N EFAK LE+M+ +I K+F+ R N F+ +NVH+ HSLEEL++L + PKVVLA+ SL+ G + LLV WAS N IL T + ++ + E E
Sbjct: 18 FVPLCGVH----GQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAK---SMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGTLSSFIQTYMDSDETE 387
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA) HSP 1 Score: 345 bits (886), Expect = 2.450e-101 Identity = 185/373 (49.60%), Postives = 243/373 (65.15%), Query Frame = 0
Query: 133 VVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELRE 505
+ F+PL G P+ +LE+ ILLDCGW+ +D LL+PL+ VV +I+ VLISHPDL HLG LPYA GKLG++AK+ T+PV+KMGQM +YDAY SR + F F+LDDVD AF F LK+SQ T SG+G + ITPYAAG +IG +W++ +T++ I+YA YNH +ERHL P+ L TL +P++LITDA N+ SR R++ LI ++ T+R GGNVLLP DTAGRVLELLV+LD+HW H SY L+ L+N A+NT EFAK LEWMSE I F R N F+ NV + H E+++ + PKVVLA+ SL+ GF++ + V W S N I+ T T AR L E
Sbjct: 5 IKFSPLCGAYN----EDPLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQ---LEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEFPS-PKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLME 366
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: A0A7S0WC87_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WC87_9CHLO) HSP 1 Score: 342 bits (878), Expect = 9.170e-100 Identity = 181/377 (48.01%), Postives = 245/377 (64.99%), Query Frame = 0
Query: 132 KVVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQ-AFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREIT 507
KV+ TPLYG + G P+ + + G ILLDCGW+ QFD LL PL + ID VLISHPD HLG LPYAFGKLGM KVYATLPV KMGQM +YD +L+R + +FQ F LDDVDTAFA F +KF Q G+G G+T+T YAAG +G AVW++ ED +VYA YN +ERHL +A ++RP++LITDA N ++ R+ QL ++ +VR GNVL+P D AGRVLEL++LL+E W + +LGSY+++LL N A+NT +FAK LEWM E + AF+ +R NPF+ + + + HS+EEL L PKVVLA+ SL+ G ++ L WA +N ++LTG + + E+ +++
Sbjct: 28 KVLVTPLYGVK----GEQPMCYHVSIDGCNILLDCGWNDQFDVDLLAPLAAIAPTIDAVLISHPDTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQCDFQETFSLDDVDTAFAAFVPVKFMQLSMLRGKGEGITVTAYAAGHTLGGAVWKIGKDAED--VVYAVDYNVRKERHLNGTAFDAIHRPALLITDACNVGRAVPNKATRDAQLTEAILSSVRKNGNVLIPIDPAGRVLELILLLEEKWAQRQLGSYQIILLTNVAYNTIDFAK---SHLEWMGEGVTTAFERKRENPFDTKFLTLCHSMEELKALPAGPKVVLASFGSLEAGPARHLFAEWADNASNLVILTGQPEPGSLSEEVLQMS 395
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: A0A7R9T8A6_MICPS (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T8A6_MICPS) HSP 1 Score: 341 bits (875), Expect = 3.610e-98 Identity = 179/376 (47.61%), Postives = 249/376 (66.22%), Query Frame = 0
Query: 133 VVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELREITR 508
V TPLYG G P+S +L+ G ILLDCGW+ + +L+PL +V +D VL+SHPD EHLG LPYAFGKLG+ KVYATLPV KMG M +YD +LSR ++ +F F LDDVD AF F ++++QH G G G+++T +AAG M+GA VW+V +ED ++YA YNH +E+HL + L +L RPSVLITD+ S T + R+ ++++ ++ +VR GNVL+P D AGRVLELL+LL+E+W + +LG+Y+LVLL A+NT EFA+ LEWM E + + FD+ R N F+ R + + HS+EEL L PKVVL++ SL+ G S+ L V WAS N I+LT T +RE+ +++R
Sbjct: 94 VKVTPLYGVY----GEDPLSYLLDWDGCKILLDCGWNDRLIVEMLDPLAQVAPSVDAVLVSHPDTEHLGALPYAFGKLGLNCKVYATLPVHKMGLMYMYDHFLSRSYDTDFTLFSLDDVDKAFGSFVPVRYAQHSALEGNGHGISVTAHAAGHMLGATVWKVHKDSED--VLYAVDYNHRKEKHLNGTTLESLKRPSVLITDSL-SVTREVQSKTRDDEIMNVILRSVRQDGNVLIPIDPAGRVLELLLLLEENWSQKQLGAYQLVLLSTVAYNTLEFAR---SHLEWMGENVSRNFDIDRHNVFKTRYLTLCHSIEELHALRPGPKVVLSSFGSLECGASRHLFVEWASDPRNLIILTDRTEPGTLSREVEDLSR 459
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: UPI00155AE16F (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155AE16F) HSP 1 Score: 325 bits (834), Expect = 1.080e-97 Identity = 167/369 (45.26%), Postives = 241/369 (65.31%), Query Frame = 0
Query: 150 PVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMHEGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLG--SYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLTGMGHGSTTARELRE-ITRAREIEAE 515
P IL++ V ILLDCGWD +FD ++ L+ V +D VL+SHPD HLG LPY GKLG+ +YAT+PV+KMGQM +YD Y+S + G+F F LDDVDTAF + LK++Q ++ G+G G++ITP AG MIG +W++ + + DIVYAT +NH +ERHL L L RPS+LITDA+N+ R AR+ +L++ ++ TVR GNVL+ DTAGR+LEL +LD+ W+ G +Y L LL+N ++N EFAK +EWMS+++ KAF+ R+NPF+ +++ + H+L ++ L PKVVLA+ L+ GF++ L ++WAS N+I+LT T A +L E R+IE +
Sbjct: 18 PPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAADTAGRMLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVVEFAKSQ---IEWMSDKLTKAFEGARNNPFQFKHIQLCHTLADVYKLPAGPKVVLASTPDLESGFTRDLFIQWASNANNSIILTTRTSPGTLAMDLVENYAPGRQIELD 382
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Match: K3WHC0_GLOUD (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC0_GLOUD) HSP 1 Score: 334 bits (857), Expect = 2.790e-97 Identity = 172/360 (47.78%), Postives = 247/360 (68.61%), Query Frame = 0
Query: 133 VVFTPLYGCEEGGTGVGPVSSILEVGGVTILLDCGWDIQFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYLSRMH-EGNFQAFDLDDVDTAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHNRERHLRPSALSTLNRPSVLITDAHNSPTGGISRTARETQLISTVMDTVRGGGNVLLPTDTAGRVLELLVLLDEHWQKHRLGSYKLVLLHNTAFNTSEFAKIGFCFLEWMSEEIGKAFDLQRSNPFELRNVHIMHSLEELDDLGNDPKVVLATDMSLDYGFSKALLVRWASGGANTILLT 491
+ FTPLYG + +LE+ V ILLDCGW Q+DT LL+PL+ V+ RIDLVLISH DL H+G LPYA GKLG++A +Y TLPV +MGQ+A+YDAY ++ +G+F F LDDVD F FK LK+S+ LT + G G+ ITP+ AG +IG ++WR+ +T+D I+YA YNH E L+ + L + RP++LITD+ N + R+++++ ++ TVRGGGNVL+PTD++GRVLEL+ +LD++W +++L + LLH+ ++ T + A+ LEW +E I K FD+ R NPF+ ++H++HSLEELD+L + PKVVL T SL+ GF+K L +RWAS N+I+ T
Sbjct: 4 ITFTPLYGVHSSDP---CCAYLLEIDDVCILLDCGWTDQYDTELLKPLQRVIDRIDLVLISHLDLAHMGALPYAIGKLGLKAPIYGTLPVHRMGQIALYDAYQAKTKSDGDFALFTLDDVDAVFENFKQLKYSEKLTLTSSGEGIVITPHVAGHLIGGSLWRIEKETDD--IIYAVDYNHRSEHVLQKTILDSFTRPTLLITDSMNIHSEQPKLKDRDSKIMVEILKTVRGGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRD-PIALLHDMSYYTPKAAQ---AMLEWCNERIAKNFDVGRQNPFQFSHIHLIHSLEELDNLPS-PKVVLTTSSSLECGFAKDLFIRWASDQRNSIIFT 353 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig76.190.1 ID=prot_P-littoralis_Contig76.190.1|Name=mRNA_P-littoralis_Contig76.190.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1066bpback to top |