prot_P-littoralis_Contig76.176.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.176.6
Unique Nameprot_P-littoralis_Contig76.176.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1286
Homology
BLAST of mRNA_P-littoralis_Contig76.176.6 vs. uniprot
Match: A0A6H5L2A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A2_9PHAE)

HSP 1 Score: 738 bits (1906), Expect = 1.710e-243
Identity = 559/912 (61.29%), Postives = 616/912 (67.54%), Query Frame = 0
Query:  371 MTAVDGWGAXXXXXXXXXXXXXXXXXXXXXXXXKVVARSGREDVAXXXXXXXXXXXXXXXXXXXXXXXXACASREKWQEAVELLEVDMPGAKVKXXXXXXXXXXXXXAGPAGNWEKAYELLDGMWQDSKGARPNKRTYDLVIQACGHGGEWELGVALIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDEARYVHRIRPSLQIYGALLDCLADGEQWADVLVYLDRMVTDGVVPDAAATNTAVLAAAELGDGRRALSLLEGEAAHGSLAERQRRQGVVRDV--VEGEGYSDDLPQQGLQXXXXXXXXXQRERVVLGKKGEDGGGHCTTGSAQAEANVVKAEXXXXXXXXXXXXXXXXXXXXXTRDEGEGWSGXXXXXXXXXXXXXXXXXXXXXXXXXXVKGSTVARRLSRLAGEAGAAGATCVVEAEAGGNSR-GRDSAS-GDGVLEGGWETATPSLLNSVLHALYEAGEDAAVLEAVKRWREKGVLLNPSIYRCALKACGNLGDYNQANDILARMAEELLTPDIVHWNHALRASAACARWREARSRLKEMEVFNISPDEFSYSMALKACSAGLWSGDSWSHRSGW-AKEDGSTSSPPPAQDSSREGRWGSSRGEQQQSKVSPPSRGENAIELLSEMREKGVRLSARSFTLAMAACLESHRDKHAEVEEAGLHNRQRERQPPAADLRLSEAALSLFDQLAVAGETPNASTYALALKACARTANTRRAHNLFWAILDTPAPXXXXXRGSVRTPPSSSSLSLPSSRKNTFGDHGIRPPAAAFHRAERPQQPPPHPQSELRLEVRPWHLASAISAFGAAKDWAGAQQLWDEALRRGVSPRSPGYDAAVLAAVRAGETAAARRLVEEARALGLALS 1277
            MTAVDGWGA                         VVARSGREDVA           XXXXXXXXXXXX ACASREKWQEAVELLEVDMP AKVKXXXXXXXXXXXXXAGP GNWEKAY+LLD MWQD +GA+P+K TYDLVIQACGHGGEWELGV LIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDEARYVHRIRPSLQIYGALL  LA+GE+WADVLVY+DRMV DGV  DAAATNTAVLAAAELGDGRRALSLLEG    GS     R++ +VRD    EG G  + L   GLQ         +R R     +G DGG     G  + E                               E E   G                                AR    + GE       CV E    G  R G DS S  DGV  GGWE  TP LL SVL AL E  ED+AVLEAVKR REKGVLLNPSIYRCALKACGNLGDY+QANDIL RMAEE LTPDIVHWNHALRASAACARW+E R RLKEME    +PDEFSYSMALKACSAGLWSGDSW    GW A+ED S+     A +   EG+   S G++++ KV    RG+NAIELL EM+++GVRLSA ++TLAMAACLE HRD+H E+E AGL    +E+ PP+ADLRL+EAAL LFD+L  AGETP A  YA ALKACARTAN +RA+ LFW +LD  +P       +V+T     S +L S R    G++     A    R  RP  PP     + R EVRPWHLASAI+A+ AA DW GA+QLWDEALRRGVSPRSPGYDAAV  A+RAG+TAAAR+LVEEAR L L L+
Sbjct:  336 MTAVDGWGAALRLLEGVLPDVNTYNAAL-----SVVARSGREDVALALLNRMRIDGXXXXXXXXXXXXDACASREKWQEAVELLEVDMPAAKVKXXXXXXXXXXXXXAGPTGNWEKAYQLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDEARYVHRIRPSLQIYGALLGALAEGERWADVLVYMDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEG--GEGSQQRGGRQREMVRDAGGEEGGGSDNRLLWDGLQ---------RRRRPAAVDEG-DGGRGVVLGQGELEG------------------------------ETEALLGRRQRAATAAGEKRHGEESEVRARTRIRPCPEAARERQGVLGEQ-----NCVDEESEDGTRRTGGDSDSVDDGV--GGWEGVTPGLLISVLRALDEQDEDSAVLEAVKRGREKGVLLNPSIYRCALKACGNLGDYDQANDILVRMAEESLTPDIVHWNHALRASAACARWQETRLRLKEMETSGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEEDKSSCRRKNALNG--EGQLDGS-GDKKEPKVPQACRGKNAIELLQEMKQRGVRLSAHAYTLAMAACLEGHRDRHPELE-AGLD---KEKGPPSADLRLAEAALLLFDRLVAAGETPTADAYAHALKACARTANPQRANALFWFMLDAASPP-----AAVQT-----SSNLSSLRNGASGNYV----ADGQRRHSRPPSPP-----QPRPEVRPWHLASAIAAYDAAGDWTGAKQLWDEALRRGVSPRSPGYDAAVSVALRAGDTAAARQLVEEARGLRLELA 1167          
BLAST of mRNA_P-littoralis_Contig76.176.6 vs. uniprot
Match: D7FQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ90_ECTSI)

HSP 1 Score: 704 bits (1818), Expect = 4.070e-236
Identity = 500/828 (60.39%), Postives = 560/828 (67.63%), Query Frame = 0
Query:  458 MPGAKVKXXXXXXXXXXXXXAGPAGNWEKAYELLDGMWQDSKGARPNKRTYDLVIQACGHGGEWELGVALIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDEARYVHRIRPSLQIYGALLDCLADGEQWADVLVYLDRMVTDGVVPDAAATNTAVLAAAELGDGRRALSLLEGEAAHGSLAERQRRQGVVRDVVEGEGYSDDLPQ--QGLQXXXXXXXXXQRER---VVLGKKGEDGGGHCTTGSAQAEANVVKAEXXXXXXXXXXXXXXXXXXXXXTRDEGEGWSGXXXXXXXXXXXXXXXXXXXXXXXXXXVKGSTVARRLSRLAGEA-GAAGATCVVEAEAGGNSRG--RDSASGDGVLEGGWETATPSLLNSVLHALYEAGEDAAVLEAVKRWREKGVLLNPSIYRCALKACGNLGDYNQANDILARMAEELLTPDIVHWNHALRASAACARWREARSRLKEMEVFNISPDEFSYSMALKACSAGLWSGDSWSHRSGWAKEDGSTSSPPPAQDSSREGRWGSSRGEQQQSKVSPPSRGENAIELLSEMREKGVRLSARSFTLAMAACLESHRDKHAEVEEAGLHNRQRERQPPAADLRLSEAALSLFDQLAVAGETPNASTYALALKACARTANTRRAHNLFWAILDTPAPXXXXXRGSVRTPPSSSSLSLPSSRKNTFGDHGIRPPAAAFHRAERPQQPPPHPQSELRLEVRPWHLASAISAFGAAKDWAGAQQLWDEALRRGVSPRSPGYDAAVLAAVRAGETAAARRLVEEARALGLALS 1277
            MP AKVK             AGP GNWEKAY+LLD MWQD +GA+P+K TYDLVIQACGHGGEWELGV LIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFD+ARYVHRIRPSLQIYGALL  LA+GE+WADVLVYLDRMV DGV  DAAATNTAVLAAAELGDGRRALSLLEG    GS     R++GV RDVV  EG   D  Q   GLQ         + +    VVLG+   +G         + EA + + +                       +E E                              V+  T  R  S  AGE  G       V+ EA   +R   RDS S D  + GGWE  TP LLNSVL AL E  ED+AVLEAVKR REKG+LLN SIYRCALKACGNLGDY QANDIL RMAEE LTPDIVHWNHALRASAACARW+E R RL+EME F  +PDEFSYSMALKACSAGLWSGDSW    GW  E+  TSS       S EG+  SS G++Q+ KV    RG++AIELL EM+++GVRLSA ++TLAMAACLE HRD+H E+E AGL    +E+ PP+ADLRL+EA L LFD+L  AGETP A  YA ALKACARTAN +RA+ LFW +LD  +P       +VRT  ++SSL          GDH      A+  R   P   PP P    R EVRPWHLAS I A+ AA DWAGA+QLWDEALRRGVSPRSPGYDAAV AA+RAG+TAAAR+LVEEAR L L L+
Sbjct:    1 MPAAKVKPDVISFTSAIHACAGPTGNWEKAYQLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDQARYVHRIRPSLQIYGALLGALAEGERWADVLVYLDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEG--GEGSQQRGGRQRGVARDVVGEEGGGSDNRQLCDGLQRRRRPAGVDEGDGIRGVVLGQGELEG---------EPEALLERRQRAATAGGEKRHG-----------EESE------------------------------VRARTRIRSSSEAAGERQGVVADENGVDEEAQDGTRRTERDSDSVDDGVGGGWEGVTPGLLNSVLRALDEQDEDSAVLEAVKRGREKGILLNQSIYRCALKACGNLGDYQQANDILVRMAEESLTPDIVHWNHALRASAACARWQETRLRLQEMETFGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEE-DTSSSRRRNALSSEGQLDSS-GDKQEPKVPQACRGKSAIELLQEMKQRGVRLSAHAYTLAMAACLEGHRDRHPELE-AGLD---KEKGPPSADLRLAEATLLLFDRLVAAGETPTADAYAHALKACARTANPQRANALFWVMLDDASPP-----AAVRTSSTASSLC-----NGASGDH-----VASGQRRHSPPPSPPQP----RPEVRPWHLASTIVAYDAAGDWAGAKQLWDEALRRGVSPRSPGYDAAVSAALRAGDTAAARQLVEEARGLRLELA 751          
BLAST of mRNA_P-littoralis_Contig76.176.6 vs. uniprot
Match: D7FQ89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ89_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 2.850e-7
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0
Query:  124 MMAAAKSRRWREVLGILNHWEEHAARLDAKTYNVSLSAL 162
            MMAAA+ RRW EVL IL HWEE+A RLDAKTYNV+LSAL
Sbjct:    1 MMAAARRRRWTEVLEILGHWEENAGRLDAKTYNVALSAL 39          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.176.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2A2_9PHAE1.710e-24361.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ90_ECTSI4.070e-23660.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQ89_ECTSI2.850e-779.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 738..758
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 992..1030
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1141..1203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1156..1171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 992..1039
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1141..1155
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 115..263
coord: 1033..1268
coord: 447..670
coord: 379..494
coord: 864..977
coord: 220..422
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 151..197
e-value: 1.0E-8
score: 35.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 248..304
e-value: 8.8E-10
score: 38.5
coord: 527..586
e-value: 2.9E-6
score: 27.2
coord: 316..372
e-value: 0.0092
score: 16.0
coord: 382..442
e-value: 2.9E-10
score: 40.1
coord: 889..938
e-value: 0.0025
score: 17.9
coord: 457..516
e-value: 2.9E-5
score: 24.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 507..540
e-value: 7.8E-6
score: 23.8
coord: 295..329
e-value: 5.2E-6
score: 24.3
coord: 154..186
e-value: 6.6E-7
score: 27.1
coord: 225..259
e-value: 3.7E-4
score: 18.5
coord: 260..294
e-value: 6.5E-5
score: 20.9
coord: 331..364
e-value: 2.9E-4
score: 18.8
coord: 188..219
e-value: 1.6E-4
score: 19.7
coord: 613..646
e-value: 9.2E-4
score: 17.2
coord: 398..431
e-value: 1.2E-4
score: 20.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 258..292
score: 11.224429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 293..327
score: 11.290196
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 10.796938
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..257
score: 10.654441
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..465
score: 9.777537
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 395..429
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..497
score: 8.812943
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..538
score: 10.807899
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 328..362
score: 9.558311
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 610..644
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 13.022082
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 930..964
score: 8.593717
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 574..609
score: 8.637562
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 375..478
e-value: 2.4E-27
score: 97.5
coord: 840..981
e-value: 2.7E-20
score: 74.4
coord: 116..221
e-value: 2.2E-22
score: 81.3
coord: 479..583
e-value: 1.4E-22
score: 81.9
coord: 584..685
e-value: 1.8E-14
score: 55.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 230..374
e-value: 2.3E-38
score: 134.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1030..1281
e-value: 1.5E-20
score: 75.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:491034..501534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.176.6mRNA_P-littoralis_Contig76.176.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 490967..501907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.176.6 ID=prot_P-littoralis_Contig76.176.6|Name=mRNA_P-littoralis_Contig76.176.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1286bp
MVTSCAGLASCSAAPASKQHAFVANTVPRLSRVRQRAFSCQHQQAPAAAA
PAGRSPFSTRKRHRQLLNTAASYHNNAGDIATIGGRLDVGPVCVSRRGSS
KSSSSGSGSGGSSGPNVNTSRNRMMAAAKSRRWREVLGILNHWEEHAARL
DAKTYNVSLSALGKCGRWKEALATLDRMRSKGIPPDLYSFNSAISACGRA
AKWKQALALLSEMEREGSRVSPDLFSYNGAINAAAKDGRWQQALDLLMGI
KRRGLAPDVVSYSSAMSACDRAGEWQRALEVMDLMLQQKIEPNIVSYGTA
ISACARGGRWQKALSLMADIPSRGLEPNAHVYGSAIHACVVGGEHGRALV
LLEEMLERRVVPDAAVFTAAMTAVDGWGAALRLLEDMKREGVLPDTKTYN
AALKVVARSGREDVALALLNKMRTDGYSPDVVSFNTAIDACASREKWQEA
VELLEVDMPGAKVKPDVITFTSVIHACAGPAGNWEKAYELLDGMWQDSKG
ARPNKRTYDLVIQACGHGGEWELGVALIDDMRDLGIKPDAQTFNIAVAAC
ARSGERLAAETLVANMWNARVAPDEFTYASLVAACGRAKEWKRATEIFDE
ARYVHRIRPSLQIYGALLDCLADGEQWADVLVYLDRMVTDGVVPDAAATN
TAVLAAAELGDGRRALSLLEGEAAHGSLAERQRRQGVVRDVVEGEGYSDD
LPQQGLQQGLQQGLQQQRERVVLGKKGEDGGGHCTTGSAQAEANVVKAEE
EVLVLLERKRSSAAAVGGRETRDEGEGWSGGVAARAVVGGNVNSSDDGAA
AAAAAVVKGSTVARRLSRLAGEAGAAGATCVVEAEAGGNSRGRDSASGDG
VLEGGWETATPSLLNSVLHALYEAGEDAAVLEAVKRWREKGVLLNPSIYR
CALKACGNLGDYNQANDILARMAEELLTPDIVHWNHALRASAACARWREA
RSRLKEMEVFNISPDEFSYSMALKACSAGLWSGDSWSHRSGWAKEDGSTS
SPPPAQDSSREGRWGSSRGEQQQSKVSPPSRGENAIELLSEMREKGVRLS
ARSFTLAMAACLESHRDKHAEVEEAGLHNRQRERQPPAADLRLSEAALSL
FDQLAVAGETPNASTYALALKACARTANTRRAHNLFWAILDTPAPPPPPP
RGSVRTPPSSSSLSLPSSRKNTFGDHGIRPPAAAFHRAERPQQPPPHPQS
ELRLEVRPWHLASAISAFGAAKDWAGAQQLWDEALRRGVSPRSPGYDAAV
LAAVRAGETAAARRLVEEARALGLALSWSEDDFRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf