prot_P-littoralis_Contig76.158.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.158.3
Unique Nameprot_P-littoralis_Contig76.158.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length957
Homology
BLAST of mRNA_P-littoralis_Contig76.158.3 vs. uniprot
Match: A0A6H5KE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE27_9PHAE)

HSP 1 Score: 879 bits (2270), Expect = 1.460e-306
Identity = 542/983 (55.14%), Postives = 600/983 (61.04%), Query Frame = 0
Query:   32 QGLRVPWSWAARSMVETVMRYPSGLTEAVILAELELLWRRDVRGALVPGKLQAYLDAQYAPLSDVIQACVVRHSDQLVTLVEDHSRSVSCDQSPAKVGMYLHQNFKSCLRYAQEAGHDLLAPGRKVRLTGCRLLTGVAAAVSGSGRAGGGEGG-RRSPGGGDGLSTLLLTEYLAFVLDHRRSDDIRLAAGAFGQTRVRDTFNENSNHEAFFVVCKVLEIRRPRQHNTSSSGQQXXXXXXTLQTVVLECAARMXXXXXXXXXXXQGRWRPSGRVEAGANGGDGRCDSSGGRETVLLHLWDEQTCLTSLFQKGDGLAVYWPWLAEQQQSGDSIHDDSVPLTGRGTSSQQNSLSSQLPLAGDASGWHFEYGSATALFVLPRESRAQLFSAANGNHDNNNAITNSGTGDATGAKGPIEAMTGSGGGGISSRDRSSTAVRAARERVAEGVGRGR---VLHLQDMPVDENGVRDVLQFPRRLCVSDLAPNMSNVSVYGQVVYVVCVPGSSLPAVLPPSRXXXXXXXXXXXXXXXXXXXXXXXLSQLPVKHVXXXXXXXXXXQQPSKDS---TGFGAA-------NVVELWIRDEGGKARVLCCGRKAAADALRCRLGQYVLACGLRTFAAAFPPPDGEAKRPGGDVIVLCGETDETAREDAAAASTGEGRTXXXXXXXXXXXXXXXXXXDNTSRILNTSCLEGLLHCPFLSRHSLLCDRRRAPGPRSSFACKVAVTWVRWSFGGDGLWAFHRRCGTPLPCHYSALGTSADSARHSSRKRPREIRAPGGGGSRTSGAREDVCATCPLCKISVIASR----------------------------------------------ADEAELGYAPLLVALDDGTRCLVAECRSEVVTAALGGINAHVFLQMGQVERKATLDSVIGREIRCVVGGNGAEATADANDVDCFASSGGGDGCSDWGGGDGKIPGRVEFRVERIASANPAADLAHLLS 954
            +G +VP      +++ETV RYPSGLTEAVILAELELLWRRDVRGA VPGKLQAYLDAQYAPLSDVIQACVVRHSDQLVTLVEDHS SVS + SPAKV MYLHQNFK CLRYAQ  GHDLLAPGRKVRLTGCRLLTG A                RRSP  G G STLLLTEYLAFVLDHRRSDD+RLA G FG  RV++TF E SN+E FFV+CK     R +QH        XXXXXX                                                  RETVL HLWDEQTCLTSLF+KGDGL VYWPWL  +QQ   S  D        G  SQQ  +SSQLPL   +SGWHFEYGSATALFVLPRESRAQLFSAAN   D+N      G G +TG  G +E+ +               A R A  R A   GRGR   V  + +MP+DENGVRDVLQFPRRL V+DLAPN+SN S+YGQVV V  VPGSSLPA+LPPSR                       LSQLP+K V          QQ         G GA         VVEL IRD+ G ARVLCCGRKAAADALRCR GQYVL CGLRTFAAAFPP D   + P G V+VLCGE ++ +REDAAA +  EGR                   D+ S +LNTS LEG LHCPFLSRHSLL DRRR PGPR+SFACK AVTW RW+F GDGLWA HRRCG  LPCH+SALG SAD AR +SRKR R++R PG   +  +GAR+ V   CPLC+  V AS                                               ADEAELGYAPLL+ALDDGTRCLVAECRS VV+AA GG+NAH FLQM + ERKAT+DS++GREIRCVVGG GA +                    DW G      GRV  RVERIAS NPAADLA+L+S
Sbjct:    4 RGPKVPKFRGHTTLIETVRRYPSGLTEAVILAELELLWRRDVRGAFVPGKLQAYLDAQYAPLSDVIQACVVRHSDQLVTLVEDHSCSVSSNLSPAKVDMYLHQNFKPCLRYAQGVGHDLLAPGRKVRLTGCRLLTGAAXXXXXXXXXXXXXXXXRRSPNCG-GPSTLLLTEYLAFVLDHRRSDDLRLAQGMFGGQRVKNTFEEKSNYEEFFVICKG----RKQQHXXXXXXXXXXXXXXXXX-----------------------------------------------RETVLFHLWDEQTCLTSLFRKGDGLGVYWPWLVREQQPRSSGGDQGSAAAPGGLPSQQQLVSSQLPLPRASSGWHFEYGSATALFVLPRESRAQLFSAAN--EDSN------GDGFSTGGPG-VESRSSXXXXXXXXXXXXVVASRKAFSRGAVVNGRGRGGTVGAVHEMPIDENGVRDVLQFPRRLFVTDLAPNLSNASIYGQVVSVASVPGSSLPAILPPSRGMSSLSSS---------------LSQLPLKPVMLMQQELQQLQQQESGMGLVAGRGAXXXXXXXXKVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPSDDSEQGPDGHVVVLCGEAEDMSREDAAATTGAEGRAAAGARAGEAGGGG-----DSVSGVLNTSSLEGFLHCPFLSRHSLLHDRRRTPGPRASFACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASADPARRTSRKRQRDMREPGCVRNGGTGARQGVSVMCPLCQAGVSASLSSSQFTFVHDTAAAVLTVALISFCHWACVVARARRLLRQRSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVSAAFGGMNAHDFLQMDEAERKATVDSLVGREIRCVVGGGGAASEVXXXXXXXXXXX---XXEGDWDGA-----GRVGLRVERIASVNPAADLAYLVS 897          
BLAST of mRNA_P-littoralis_Contig76.158.3 vs. uniprot
Match: D7FQ83_ECTSI (CDC24_OB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ83_ECTSI)

HSP 1 Score: 696 bits (1796), Expect = 1.090e-236
Identity = 471/965 (48.81%), Postives = 529/965 (54.82%), Query Frame = 0
Query:    1 MDWVQQHCDRLRSNLQHVVDGGATAAQRTGGQGLRVPWSWAARSMVETVMRYPSGLTEAVILAELELLWRRDVRGALVPGKLQAYLDAQYAPLSDVIQACVVRHSDQLVTLVEDHSRSVSCDQSPAKVGMYLHQNFKSCLRYAQEAGHDLLAPGRKVRLTGCRLLTGVAAAVSGSGRAGGGEGGRRSPGGGDGLSTLLLTEYLAFVLDHRRSDDIRLAAGAFGQTRVRDTFNENSNHEAFFVVCKVLEIRRPRQHNTSSSGQQXXXXXXTLQTVVLECAARMXXXXXXXXXXXQGRWRPSGRVEAGANGGDGRCDSSGGRETVLLHLWDEQTCLTSLFQKGDGLAVYWPWLAEQQQSGDSIHDDSVPLTGRGTSSQQNSLSSQLPLAGDASGWHFEYGSATALFVLPRESRAQLFSAANGNHDNNNAITNSGTGDATGAKGPIEAMTGSGGGGISSRDRSSTAVRAARERVAEGVGRGR---VLHLQDMPVDENGVRDVLQFPRRLCVSDLAPNMSNVSVYGQVVYVVCVPGSSLPAVLPPSRXXXXXXXXXXXXXXXXXXXXXXXLSQLPVKHVXXXXXXXXXXQQPSKDSTGFGAA--------NVVELWIRDEGGKARVLCCGRKAAADALRCRLGQYVLACGLRTFAAAFPPPDGEAKRPGGDVIVLCGETDETAREDAAAASTGEGRTXXXXXXXXXXXXXXXXXXDNTSRILNTSCLEGLLHCPFLSRHSLLCDRRRAPGPRSSFACKVAVTWVRWSFGGDGLWAFHRRCGTPLPCHYSALGTSADSARHSSRKRPREIRAPGGGGSRTSGAREDVCATCPLCKISVIASRADEAELGYAPLLVALDDGTRCLVAECRSEVVTAALGGINAHVFLQMGQVERKATLDSVIGREIRCVVGGNGAEATADANDVDCFASSGGGDGCSDWGGGDGKIPGRVEFRVERIASANPAADLAHLLS 954
            MDWVQ+HCDRLRS LQ VVD GA++    G  GLRVPWSW  R+++ETV RYPSGLTEAVILAELELL           G  +A                                   SC +S   + M   ++   C   ++ A    L          CRLLTG                           STLLLTEYLAFVLDHRRSDD+RLA G FG  RV+DTF E SN+E FFVVCK                                                                                               GDGL VYWPWL  +QQ   S  D        G SSQQ  +SSQLPL  D+ GWHFEYGSATALFVLPRESRAQLFSAAN  +D+N      G G +TG  G     +                 R A  R A   GRGR   V    +MP DENGVRD+LQFPRRL V+DLAPNMSN S+YGQVV V  VPGSSLPA+LPPSR                       LSQLP+K V  XXXXXXXX                     NVVEL IRD+ G ARVLCCGRKAAADALRCR GQYVL CGLRTFAAAFPP D   + P G V+VLCGE +E +REDAAA +  EGR  XXXXXXXXXXXX     D+ S +LNTS LEG LHCPFLSRHS L DRRR PGPR+S ACK AVTW RW+F GDGLWA HRRCG  LPCH+SALG SAD AR  SRKRPR++R PG   S  +GA++ V   CPLC+ SV  + ADEAELGYAPLL+ALDDGTRCLVAECRS VVTAA GG+NAH FLQMG+ ERKAT+DS++GREIRCVVGG+GA +                               RV  RVERIAS NPAADLA+L++
Sbjct:    1 MDWVQEHCDRLRSKLQGVVDSGASSG--AGELGLRVPWSWTCRTLIETVRRYPSGLTEAVILAELELLCEGG-------GTFEA----------------------------------PSCPESFRPISM---RSTPRCPTSSRRASFATLT-------NWCRLLTGAXXXXXXXXXXXXXXXXXXXXXXXXXXSTLLLTEYLAFVLDHRRSDDLRLAQGMFGGLRVKDTFEEKSNYEEFFVVCK-----------------------------------------------------------------------------------------------GDGLGVYWPWLVREQQPRSSGGDQGSAAAPGGLSSQQQLVSSQLPLPSDSFGWHFEYGSATALFVLPRESRAQLFSAAN--NDSN------GDGFSTGGPGVESRSSXXXXXXXXXXXXXVVVSRKATSRGAGVDGRGRGGTVGAAHEMPADENGVRDLLQFPRRLFVTDLAPNMSNASIYGQVVSVASVPGSSLPAILPPSRGMSSSSSS---------------LSQLPLKPVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPLDDSEQGPDGHVVVLCGEAEEMSREDAAATTDAEGRAAXXXXXXXXXXXX-----DSVSGVLNTSSLEGFLHCPFLSRHSFLHDRRRTPGPRASLACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASADPARRISRKRPRDMREPGCVRSGRTGAQQGVSVICPLCQSSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVTAAFGGMNAHDFLQMGEAERKATVDSLVGREIRCVVGGDGAASEVXXXXXXXXXXX--------XXXXXXXXXXRVGLRVERIASVNPAADLAYLVA 781          
BLAST of mRNA_P-littoralis_Contig76.158.3 vs. uniprot
Match: A0A0P1AY76_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY76_PLAHL)

HSP 1 Score: 70.9 bits (172), Expect = 1.000e-8
Identity = 103/397 (25.94%), Postives = 149/397 (37.53%), Query Frame = 0
Query:   35 RVPWSWAARSMVETVMRYPSGLTEAVILAELELLWRRDVRG-----ALVPGKLQAYLDAQYAP--LSD----VIQACVVRHSDQLVTLVEDHSRSVSCDQSPAKVGMYLHQNFKSC-------LRYAQEAGHDLLAPGRKVRLTGCRLLTGVAAAVSGSGRAGGGEGGRRSPGGGDGLSTLLLTEYLAFVLDHRRSDDIRLAAGAFGQTRVRDTF---NENSNHEAFFVVCKVLEIRRPRQHNTSSSGQQXXXXXXTLQTVVLECAARMXXXXXXXXXXXQGRWRPSGRVEAGANGGDGRCDSSGGRETVLLHL---WDEQTCLTSLFQKGDGLAVYWPWLAEQQQSGDSIHDDSVPLTGRGTSSQQNSLSSQLPLAGDASGWHFEYGSATALFVLP 407
            R+ + W    ++  +  YP GLTEA+I+ EL  L+ R V G     A    K +   D +     L+D     +QA V+ + D  VTL  D++  V          MYLHQ F+SC       L+Y            RKV  T  ++L      ++           R    G     TLL T YL   L+ +   D RL A +    +V       ++    +   +  KVL+I   R   T              + V+L                        G V+  + G     DS    +T  LHL   WD+Q  L+ LF  GD LA++ P++    Q     HD  +       SSQQ+              ++ EYGSAT LF  P
Sbjct:   52 RISFYWVLSKLLRLIEEYPDGLTEAIIVTELTKLFERKVVGDTQQPAGTFTKKRKIRDEEDMGNLLTDGEQKALQAQVISYGDHRVTLALDYATDVIAH-------MYLHQRFRSCINFLNRELKYEPTRKTYPFQDARKVTFTHGKVLERKDVEMA-----------RGEYDGNQVKFTLLPTPYLIVQLNEKNPLDRRLLADSMSLNQVDQLICKAHDCLGIQQLMLKVKVLDIGAVRPCQTP---------LYVHRQVIL-----------------------FGEVDQLSIGVRSNMDS----KTQGLHLMVLWDDQVDLSRLFNIGDTLAIFHPFVHVCDQ-----HDTEIQYILTDYSSQQHL------------NYYLEYGSATVLFTSP 377          
BLAST of mRNA_P-littoralis_Contig76.158.3 vs. uniprot
Match: A0A6A4Q7X9_LUPAL (Putative Cell division control protein 24, OB domain 2 n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A4Q7X9_LUPAL)

HSP 1 Score: 60.5 bits (145), Expect = 1.460e-5
Identity = 57/233 (24.46%), Postives = 92/233 (39.48%), Query Frame = 0
Query:   38 WSWAARSMVETVMRYPSGLTEAVILAELELLW-------------------RRDVRGALVPGK--LQAYLDAQYAPLSDVIQACVVRHSDQLVTLVED-HSRSVSCDQSPAKVGMYLHQNFKSCLRYAQEAGHDLLAPGRKVRLTGCRLLTGVAAAVSGSGRAGGGEGGRRSPGGGDGLSTLLLTEYLAFVLDHRRSDDIRLAAGAFGQTRVRDTFNENSNHEAFFVVCKVLE 248
            WSW    +++T   Y SG+T A++LAEL   W                   + + R   +P    + +  +  +  L+ V++A ++   D  V    + H  ++    S   + +YLH+ F      +    + +L  GR+V LTGC L T    A  GSG                    LL TEYL  VLD  + DD  L    F          ++ N  A++ +   +E
Sbjct:   58 WSWIVSRILKTCTAYSSGVTPAILLAELAQAWCEQRRLGAPKKRLELINQMKENHRRTKLPNTVTIDSIYEKNFLSLNSVLEAVII---DAFVLPGTNIHMLTLGDYWSSNIIDLYLHRRFYG----SANLQNGILNKGREVLLTGCYLRT----AAEGSG-----------------YPRLLPTEYLVIVLDENQDDDAMLLGAQFFSDSFSSISLDSVNKGAYYSLYARIE 262          
BLAST of mRNA_P-littoralis_Contig76.158.3 vs. uniprot
Match: UPI00106BFA99 (uncharacterized protein LOC114525665 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BFA99)

HSP 1 Score: 58.2 bits (139), Expect = 7.030e-5
Identity = 42/160 (26.25%), Postives = 75/160 (46.88%), Query Frame = 0
Query:   18 VVDGGATAAQRTGGQGLRVPWSWAARSMVETVMRYPSGLTEAVILAELELLWRR----DVRGALVPG-KLQAYLDAQYAPLSDVIQACV-----VRHSDQLVTLVEDHSRSVSCDQSPAKVGMYLHQNFKSCLRYAQEAGHDLLAPGRKVRLTGCRLLTG 167
             +D   +  Q+  G    +PW W    +V  + RYP+G+T+A++L+ELE  WR+      +G +     L++ + +++     V +  +     V  +   V ++ +H  S    +    + MYLHQ       Y +     ++A G K+R TGCRL  G
Sbjct:    5 TIDKLVSEFQQRLGTTTSIPWGWFFTKLVTLLSRYPTGVTKAIMLSELECSWRKIEKLQAKGGMNSADSLRSIVLSRHLSPQAVFEVFLKEVKNVEATQTRVAVLMEHETS---SEHSFTMEMYLHQKL-----YGEV--EQIMANGYKLRFTGCRLFDG 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.158.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KE27_9PHAE1.460e-30655.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ83_ECTSI1.090e-23648.81CDC24_OB1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A0P1AY76_PLAHL1.000e-825.94Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A6A4Q7X9_LUPAL1.460e-524.46Putative Cell division control protein 24, OB doma... [more]
UPI00106BFA997.030e-526.25uncharacterized protein LOC114525665 n=1 Tax=Dendr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035200Cell division control protein 24, OB domain 2PFAMPF17245CDC24_OB2coord: 123..260
e-value: 2.0E-12
score: 47.9
IPR035201Cell division control protein 24, OB domain 1PFAMPF17246CDC24_OB1coord: 5..73
e-value: 6.3E-14
score: 52.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 782..801
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 670..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..562
NoneNo IPR availablePANTHERPTHR36033NUCLEIC ACID-BINDING PROTEINS SUPERFAMILYcoord: 27..76
coord: 126..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:430852..441038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.158.3mRNA_P-littoralis_Contig76.158.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 430382..441047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.158.3 ID=prot_P-littoralis_Contig76.158.3|Name=mRNA_P-littoralis_Contig76.158.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=957bp
MDWVQQHCDRLRSNLQHVVDGGATAAQRTGGQGLRVPWSWAARSMVETVM
RYPSGLTEAVILAELELLWRRDVRGALVPGKLQAYLDAQYAPLSDVIQAC
VVRHSDQLVTLVEDHSRSVSCDQSPAKVGMYLHQNFKSCLRYAQEAGHDL
LAPGRKVRLTGCRLLTGVAAAVSGSGRAGGGEGGRRSPGGGDGLSTLLLT
EYLAFVLDHRRSDDIRLAAGAFGQTRVRDTFNENSNHEAFFVVCKVLEIR
RPRQHNTSSSGQQPRKRRQTLQTVVLECAARMGAEQQQKQQQQQGRWRPS
GRVEAGANGGDGRCDSSGGRETVLLHLWDEQTCLTSLFQKGDGLAVYWPW
LAEQQQSGDSIHDDSVPLTGRGTSSQQNSLSSQLPLAGDASGWHFEYGSA
TALFVLPRESRAQLFSAANGNHDNNNAITNSGTGDATGAKGPIEAMTGSG
GGGISSRDRSSTAVRAARERVAEGVGRGRVLHLQDMPVDENGVRDVLQFP
RRLCVSDLAPNMSNVSVYGQVVYVVCVPGSSLPAVLPPSRTTTSAAGGGS
RNTQPSTSTSSSFLSQLPVKHVMLLQQQQQERQQPSKDSTGFGAANVVEL
WIRDEGGKARVLCCGRKAAADALRCRLGQYVLACGLRTFAAAFPPPDGEA
KRPGGDVIVLCGETDETAREDAAAASTGEGRTGGREKKGDGGGGGGGGGG
DNTSRILNTSCLEGLLHCPFLSRHSLLCDRRRAPGPRSSFACKVAVTWVR
WSFGGDGLWAFHRRCGTPLPCHYSALGTSADSARHSSRKRPREIRAPGGG
GSRTSGAREDVCATCPLCKISVIASRADEAELGYAPLLVALDDGTRCLVA
ECRSEVVTAALGGINAHVFLQMGQVERKATLDSVIGREIRCVVGGNGAEA
TADANDVDCFASSGGGDGCSDWGGGDGKIPGRVEFRVERIASANPAADLA
HLLSHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035200Cdc24_OB2
IPR035201Cdc24_OB1