prot_P-littoralis_Contig76.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig76.1.1
Unique Nameprot_P-littoralis_Contig76.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length617
Homology
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: D7G6V2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V2_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 4.390e-71
Identity = 152/361 (42.11%), Postives = 223/361 (61.77%), Query Frame = 0
Query:   74 QSRKKTNQAITGLSTEFAAHRQETRRDVAEVDLRLQWASQSVAEELVGVRS-DLRYGTEQLVRGXXXXXXXLGEVTEKVDGIWTAVTGGVQEVRYA-----------MEEMRGGMNHIESSLYRARKENLEYFKDVSSRLDEME---RSMRKQQE-----LHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGVILPQIDSRLVESFGVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACENKADIIQCLFDEGK 414
            Q+R + N+AI GLS EFA HR + RRD+A      Q ASQ++AEELVG+ + DL+  T++L RG       LG V E VDGIW +V+ G+ EV YA           +E +   M  + S + +A++EN + F+ VSSRL   E   RS  +QQ+       L  A   L +F  + G + + L++A    ++IL       +L VHF AG +A++ ++TK +++  P  AK  V  G F+++  +F++F   P  +   N   V  +LL IVSS+C+LPPEG++LPQ+D RLV++FGV+C+S P+ +LDRYPEVGGAA+RALLQS  L  LCR S+ L +DI+ C+N+AD+IQ + D+ K
Sbjct:    9 QARMRRNRAIPGLSKEFAEHRSQARRDLAGNTTGQQSASQAIAEELVGIHAADLQ--TDKLTRGKAAVRTDLGTVME-VDGIWNSVSNGLLEVNYAVRHGTAVIYRSLEGLHEDMASLRSCIDKAQRENSKCFQQVSSRLQAFEEYVRSHHQQQDGKSLQRSLKKARMCLIEFTGTGGGEPQLLDQAKESCMEILIREPHSDSLRVHFLAGCIAIAASFTKHAQQEPPARAKAYVFDGVFRNVMLSFESFWTDPCAARTRNGICVVEYLLSIVSSVCMLPPEGLLLPQLDDRLVKAFGVLCSSEPS-ILDRYPEVGGAAVRALLQSKPLDELCRMSKSLGVDIALCDNRADLIQGMLDKRK 365          
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5KDB5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB5_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 2.360e-68
Identity = 188/535 (35.14%), Postives = 278/535 (51.96%), Query Frame = 0
Query:    1 MEVAFAAFGAIRLAAFLFSSTRQVLKKRKGGGENVGGPGVAPGVSLQIDGG--GDTASD-MLGVGMELAMKS-RNPFQSRKKTNQAITGLSTEFAAHRQETRRDVAEVDLRLQWASQSVAEELVGVRSDLR----------------------------YGTEQLVRGXXXXXXXLGEVTEKVDGIWTAVTGGVQEVRY-----------AMEEMRGGMNHIESSLYRARKENLEYFKDVSSRLDEMERS---------MRKQQ------ELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGVILPQIDSRLVESFGVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACENKADIIQCLFDEGKPM----------------------SDDILGRNLPQRIHPASQDGTETKQSDEQKLEDDIAAAY 455
            +++A A F A R AA  +S+ R    +R+   +N  G G    V + ++ G   DT    ++ VG ELAMK+ R  F SR    +AITGLS EFA HR++ +  ++E+  R    SQ++AE  + VR DLR                            YGT+QLV+G       L  V E ++G+   V  G+QEV +           +++++R  M  ++ S+ +AR+EN  YF+D+SSRL++++           MR+QQ      +  L  A  +LN F  + G DL  L+KA+ C  K+L L   +  L+ H  AGI+ V+T+Y K ++   P  AK+ V    F +IT     F      +  P    V  +LL++ SSIC+LPPEG++L ++D  LVE+FG +C S P+ LLDR+PEVGGAA R+LLQ+  L  LCRTS    +DIS C NKAD+IQ L D GKP+                      SD+++G +     + A  DG E  +S+E KL   +A+ Y
Sbjct:  297 IQLASALFFAGRWAANRYSAHR----RRETVDDNKPGAGYTS-VDINVEVGLECDTVEGAIMAVGTELAMKAHRKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQALAEGFLDVRGDLRDLXXXXXXXXXXXXXXXXXXXXXXNDFRYGTDQLVKGVAAVRTDLDTVIENMEGVREEVVTGLQEVNHTVRQGTAVIYRSLQDLRCDMGELQLSMDQAREENSHYFQDISSRLNDVKLGLIALEATYVMREQQKELSKLQNSLSEAGIYLNQFTGTGGGDLGLLDKAHTCCCKVLRLRPHLDTLDAHKMAGIIMVATSYRKHAQLKPPVTAKQYVFDSDFLNITNLLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELDPGLVEAFGELCCSQPS-LLDRFPEVGGAAWRSLLQAKPLDELCRTSNAAEVDISLCNNKADLIQALLDAGKPLGALTQVIDNGGYKTCCHRKPDSSDEVIGNDR----NSAYGDG-EVYESEESKLAASLASVY 820          
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: D7FKB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKB6_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 1.160e-30
Identity = 120/384 (31.25%), Postives = 185/384 (48.18%), Query Frame = 0
Query:    7 AFGAIRLAAFLFSSTRQVLKK----RKGGGENVGGPGVAP-GVSLQIDGGG--DTASD-MLGVGMELAMKS-RNPFQSRKKTNQAITGLSTEFAAHRQETRRDVAEVDLRLQWASQSVAEELVGVRSDLR----------------------------YGTEQLVRGXXXXXXXLGEVTEKVDGIWTAVTGGVQEVRY-----------AMEEMRGGMNHIESSLYRARKENLEYFKDVSSRLDEMERS---------MRKQQ------ELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVS 327
            A+  I+LA+ LF + R V  +    R+   E+   PG     V + ++ G   DT    ++ VG ELAMK+ R  F SR    +AITGLS EFA HR++ +  ++E+  R    SQ++AE  + VR D R                            YGT+QL++G       L  V E V+G+   V  G+ EV +           +++++R  M  ++ S+ +AR+EN  YF+DVSSRL++++           MR+QQ      +  L  A  +LN F  + G DL  L+KA+ C  K+L L   +  L+ H  AGI+ V+T+Y K ++   P  AK+ V    F +IT +   F      +  P    V  +LLD V+
Sbjct:    4 AYLCIQLASTLFLAGRWVANRYSARRRRETEDYNKPGAGDTSVEINVEFGPECDTVEGAIMAVGTELAMKAQRKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELVARQGRTSQALAEGFLDVRGDFRDLXXXXXXXXXXXXXXXXXXXXXXXXXXYGTDQLIKGVAAVHTDLDTVIENVEGVRNEVVTGLLEVNHTLRQGTAVIYRSLQDLRCVMGELQLSMDQAREENSLYFQDVSSRLNDVKSGLIALEATYVMREQQKELSKLQNSLSEAGMYLNQFTGTGGEDLGLLDKAHTCCCKVLRLRPHLETLDAHKMAGIIMVATSYRKHAQLKPPATAKQYVFDSDFLNITNSLKHFWADHAAAHTPTWSNVVCYLLDCVA 387          
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5K3B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B9_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 2.660e-30
Identity = 82/240 (34.17%), Postives = 134/240 (55.83%), Query Frame = 0
Query:  171 EMRGGMNHIESSLYRARKENLEYFKDVSSRLDEMERSMRKQQELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGV-ILPQIDSRLVESFGVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACENKADIIQCL 409
            E+R  +  + +S+ + R EN+ +F    S ++  +  +   +   L  A   L +F AS G D+  L++A   S K     V    LE+ F A  + +S  Y    K  SP EAK+  ++G+  ++ + F      P  S     RKV +FLL++VS +C+LPPE V +LP++DSRL+ +FG +CAS P EL   YP+VGGAA++A+L+  T+ +L   +  +  D++AC +K  +I+ L
Sbjct:   78 EVRRDLESVRASVEQCRAENMLFFTTFMSSIEATQHGVDVLRNGPLEEAHMSLKEFEAS-GDDVDELKEA---SRKARTALVTGSTLEIKFTAATITISAGYVHKMKAGSPSEAKQATVKGSLANVVKHFATIWADPSRSGTVEERKVLSFLLNVVSCVCVLPPENVPVLPELDSRLLPAFGALCASEP-ELRRLYPDVGGAAVKAMLEEKTMQSLFELATEVGADVTACTSKDGVIEIL 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6V2_ECTSI4.390e-7142.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KDB5_9PHAE2.360e-6835.14Integrase catalytic domain-containing protein n=1 ... [more]
D7FKB6_ECTSI1.160e-3031.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3B9_9PHAE2.660e-3034.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 529..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 555..571

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig76contigP-littoralis_Contig76:4766..7917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig76.1.1mRNA_P-littoralis_Contig76.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig76 2655..14512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig76.1.1 ID=prot_P-littoralis_Contig76.1.1|Name=mRNA_P-littoralis_Contig76.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=617bp
MEVAFAAFGAIRLAAFLFSSTRQVLKKRKGGGENVGGPGVAPGVSLQIDG
GGDTASDMLGVGMELAMKSRNPFQSRKKTNQAITGLSTEFAAHRQETRRD
VAEVDLRLQWASQSVAEELVGVRSDLRYGTEQLVRGLAVVRNDLGEVTEK
VDGIWTAVTGGVQEVRYAMEEMRGGMNHIESSLYRARKENLEYFKDVSSR
LDEMERSMRKQQELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNL
PVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETF
DAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGVILPQIDSRLVESF
GVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACE
NKADIIQCLFDEGKPMSDDILGRNLPQRIHPASQDGTETKQSDEQKLEDD
IAAAYAGLPRSTQWGGKIPNGTSEYGGSYHLDAKRPVGCDNTGQRRQSEQ
SDEQRLEDAVAAAFAGLSRSGRWGEEAKSGTSNHGRGRHFDGERPAAFGN
MVRRRESGQSDEQRFEDDIAAAYADFPRSVSRGEEAWSGTSEYGEGLNND
QQPVEEREPKATEQTQ*
back to top