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Homology
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: D7G6V2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V2_ECTSI) HSP 1 Score: 244 bits (623), Expect = 4.120e-67 Identity = 152/361 (42.11%), Postives = 223/361 (61.77%), Query Frame = 1
Query: 6361 QSRKKTNQAITGLSTEFAAHRQETRRDVAEVDLRLQWASQSVAEELVGVRS-DLRYGTEQLVRGXXXXXXXLGEVTEKVDGIWTAVTGGVQEVRYA-----------MEEMRGGMNHIESSLYRARKENLEYFKDVSSRLDEME---RSMRKQQE-----LHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGVILPQIDSRLVESFGVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACENKADIIQCLFDEGK 7383
Q+R + N+AI GLS EFA HR + RRD+A Q ASQ++AEELVG+ + DL+ T++L RG LG V E VDGIW +V+ G+ EV YA +E + M + S + +A++EN + F+ VSSRL E RS +QQ+ L A L +F + G + + L++A ++IL +L VHF AG +A++ ++TK +++ P AK V G F+++ +F++F P + N V +LL IVSS+C+LPPEG++LPQ+D RLV++FGV+C+S P+ +LDRYPEVGGAA+RALLQS L LCR S+ L +DI+ C+N+AD+IQ + D+ K
Sbjct: 9 QARMRRNRAIPGLSKEFAEHRSQARRDLAGNTTGQQSASQAIAEELVGIHAADLQ--TDKLTRGKAAVRTDLGTVME-VDGIWNSVSNGLLEVNYAVRHGTAVIYRSLEGLHEDMASLRSCIDKAQRENSKCFQQVSSRLQAFEEYVRSHHQQQDGKSLQRSLKKARMCLIEFTGTGGGEPQLLDQAKESCMEILIREPHSDSLRVHFLAGCIAIAASFTKHAQQEPPARAKAYVFDGVFRNVMLSFESFWTDPCAARTRNGICVVEYLLSIVSSVCMLPPEGLLLPQLDDRLVKAFGVLCSSEPS-ILDRYPEVGGAAVRALLQSKPLDELCRMSKSLGVDIALCDNRADLIQGMLDKRK 365
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5KDB5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB5_9PHAE) HSP 1 Score: 250 bits (639), Expect = 5.970e-65 Identity = 189/543 (34.81%), Postives = 279/543 (51.38%), Query Frame = 1
Query: 6136 GAMEVAFAAFGAIRLAAFLFSSTRQVL------KKRKGGGENVGGPGVAPGVSLQIDGG--GDTASD-MLGVGMELAMKS-RNPFQSRKKTNQAITGLSTEFAAHRQETRRDVAEVDLRLQWASQSVAEELVGVRSDLR----------------------------YGTEQLVRGXXXXXXXLGEVTEKVDGIWTAVTGGVQEVRY-----------AMEEMRGGMNHIESSLYRARKENLEYFKDVSSRLDEMERS---------MRKQQ------ELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGVILPQIDSRLVESFGVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACENKADIIQCLFDEGKPM----------------------SDDILGRNLPQRIHPASQDGTETKQSDEQKLEDDIAAAY 7506
GA V A+ I+LA+ LF + R ++R+ +N G G V + ++ G DT ++ VG ELAMK+ R F SR +AITGLS EFA HR++ + ++E+ R SQ++AE + VR DLR YGT+QLV+G L V E ++G+ V G+QEV + +++++R M ++ S+ +AR+EN YF+D+SSRL++++ MR+QQ + L A +LN F + G DL L+KA+ C K+L L + L+ H AGI+ V+T+Y K ++ P AK+ V F +IT F + P V +LL++ SSIC+LPPEG++L ++D LVE+FG +C S P+ LLDR+PEVGGAA R+LLQ+ L LCRTS +DIS C NKAD+IQ L D GKP+ SD+++G + + A DG E +S+E KL +A+ Y
Sbjct: 285 GARRVMAEAYLCIQLASALFFAGRWAANRYSAHRRRETVDDNKPGAGYTS-VDINVEVGLECDTVEGAIMAVGTELAMKAHRKFFGSRTLRQRAITGLSPEFATHRRQMQLGLSELAARQGRTSQALAEGFLDVRGDLRDLXXXXXXXXXXXXXXXXXXXXXXNDFRYGTDQLVKGVAAVRTDLDTVIENMEGVREEVVTGLQEVNHTVRQGTAVIYRSLQDLRCDMGELQLSMDQAREENSHYFQDISSRLNDVKLGLIALEATYVMREQQKELSKLQNSLSEAGIYLNQFTGTGGGDLGLLDKAHTCCCKVLRLRPHLDTLDAHKMAGIIMVATSYRKHAQLKPPVTAKQYVFDSDFLNITNLLKPFWADHAAAHTPTWSNVVRYLLELSSSICLLPPEGLVLGELDPGLVEAFGELCCSQPS-LLDRFPEVGGAAWRSLLQAKPLDELCRTSNAAEVDISLCNNKADLIQALLDAGKPLGALTQVIDNGGYKTCCHRKPDSSDEVIGNDR----NSAYGDG-EVYESEESKLAASLASVY 820
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5K3B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B9_9PHAE) HSP 1 Score: 134 bits (336), Expect = 4.140e-29 Identity = 82/240 (34.17%), Postives = 134/240 (55.83%), Query Frame = 1
Query: 6652 EMRGGMNHIESSLYRARKENLEYFKDVSSRLDEMERSMRKQQELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNLPVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETFDAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGV-ILPQIDSRLVESFGVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACENKADIIQCL 7368
E+R + + +S+ + R EN+ +F S ++ + + + L A L +F AS G D+ L++A S K V LE+ F A + +S Y K SP EAK+ ++G+ ++ + F P S RKV +FLL++VS +C+LPPE V +LP++DSRL+ +FG +CAS P EL YP+VGGAA++A+L+ T+ +L + + D++AC +K +I+ L
Sbjct: 78 EVRRDLESVRASVEQCRAENMLFFTTFMSSIEATQHGVDVLRNGPLEEAHMSLKEFEAS-GDDVDELKEA---SRKARTALVTGSTLEIKFTAATITISAGYVHKMKAGSPSEAKQATVKGSLANVVKHFATIWADPSRSGTVEERKVLSFLLNVVSCVCVLPPENVPVLPELDSRLLPAFGALCASEP-ELRRLYPDVGGAAVKAMLEEKTMQSLFELATEVGADVTACTSKDGVIEIL 312
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5KR74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR74_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 2.710e-9 Identity = 57/176 (32.39%), Postives = 83/176 (47.16%), Query Frame = -1
Query: 726 FVEHRDGYESVWLEADFQGLGLSENDKLRRSVLAIL*RVGASITSAARPVNCDFLPAAYDQTFEKIADSRLRSMPVEGVLDRPLIMKENEVWPVGIDECIKLVVTTVY-KCEAASG--R*TAGNMLHAVHEVVEYYHTSTLSASSSSG*ASEGL*SPCPGFESLHLWSKRTDAVTG 1244
+ +DG ES W ADFQG + ++K+R VL L CDFLPA F K+ L+S+ EGV +R L + E+ VW V I++ IKL+ T Y + EAA T G++L +V++ V Y A G + CP + S+ R ++V G
Sbjct: 48 IADLKDGSESAWPAADFQGWIPTADEKVRLFVLIYL------------LAGCDFLPAISGLPFYKVWILALKSVRAEGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLG--KKRTTDICPTYRSMREQCLRMNSVDG 209
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 5.780e-7 Identity = 54/176 (30.68%), Postives = 79/176 (44.89%), Query Frame = -1
Query: 726 FVEHRDGYESVWLEADFQGLGLSENDKLRRSVLAIL*RVGASITSAARPVNCDFLPAAYDQTFEKIADSRLRSMPVEGVLDRPLIMKENEVWPVGIDECIKLVVTTVY-KCEAASG--R*TAGNMLHAVHEVVEYYHTSTLSASSSSG*ASEGL*SPCPGFESLHLWSKRTDAVTG 1244
+ +DG ES W ADFQG + ++K+R VL L CDFLPA F K+ L+S+ EGV + L + E+ VW V I++ I L+ Y + EAA T G++L +V++ V Y A G + CP + S+ R +V G
Sbjct: 283 IADLKDGSESAWPAADFQGWTPTADEKVRLFVLIYL------------LAGCDFLPAISGLPFYKMWILALKSVRAEGVFNHALFVMEDGVWTVNIEQSINLLAIIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLG--KKWTTDTCPTYRSMREQCLRMKSVDG 444
BLAST of mRNA_P-littoralis_Contig76.1.1 vs. uniprot
Match: A0A6H5L577_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L577_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 3.050e-6 Identity = 55/176 (31.25%), Postives = 79/176 (44.89%), Query Frame = -1
Query: 726 FVEHRDGYESVWLEADFQGLGLSENDKLRRSVLAIL*RVGASITSAARPVNCDFLPAAYDQTFEKIADSRLRSMPVEGVLDRPLIMKENEVWPVGIDECIKLVVTTVY-KCEAASG--R*TAGNMLHAVHEVVEYYHTSTLSASSSSG*ASEGL*SPCPGFESLHLWSKRTDAVTG 1244
+ +DG ES W ADFQG + ++K+R VL L DFLPA F K+ L+S+ GV +R L + E+ VW V I++ IKL+ T Y + EAA T G++L V++ V Y A G + CP + S+ R +V G
Sbjct: 919 IADLKDGSESAWPAADFQGWIPTADEKVRLFVLTYL------------LAGSDFLPAISGLPFYKMWILALKSVRAGGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAFAGIATTPGDLLRNVNDSVRNYVDLIRVAIVKLG--KKRTADTCPTYRSMREQCMRMKSVDG 1080
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G450 |
| PFAMs | LRR_1,LRR_8 |
| Model size | 10103 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | signal peptide |
| Exons | 8 |
| Evalue | 6.02e-29 |
| EggNOG OGs | COG4886@1|root,KOG0619@2759|Eukaryota |
| Description | regulation of response to stimulus |
| Cds size | 1851 |
| COG category | U |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791564.9844868-UTR-P-littoralis_Contig76:2654..4765 | 1680791564.9844868-UTR-P-littoralis_Contig76:2654..4765 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig76 2655..4765 - |
| 1680791565.0994601-UTR-P-littoralis_Contig76:7917..13348 | 1680791565.0994601-UTR-P-littoralis_Contig76:7917..13348 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig76 7918..13348 - |
| 1680791565.1146102-UTR-P-littoralis_Contig76:13616..14031 | 1680791565.1146102-UTR-P-littoralis_Contig76:13616..14031 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig76 13617..14031 - |
| 1680791565.1315267-UTR-P-littoralis_Contig76:14217..14512 | 1680791565.1315267-UTR-P-littoralis_Contig76:14217..14512 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig76 14218..14512 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791565.0201952-CDS-P-littoralis_Contig76:4765..5361 | 1680791565.0201952-CDS-P-littoralis_Contig76:4765..5361 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 4766..5361 - |
| 1680791565.0350044-CDS-P-littoralis_Contig76:5572..5996 | 1680791565.0350044-CDS-P-littoralis_Contig76:5572..5996 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 5573..5996 - |
| 1680791565.0494664-CDS-P-littoralis_Contig76:6326..6521 | 1680791565.0494664-CDS-P-littoralis_Contig76:6326..6521 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 6327..6521 - |
| 1680791565.061222-CDS-P-littoralis_Contig76:6667..6907 | 1680791565.061222-CDS-P-littoralis_Contig76:6667..6907 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 6668..6907 - |
| 1680791565.077082-CDS-P-littoralis_Contig76:7162..7270 | 1680791565.077082-CDS-P-littoralis_Contig76:7162..7270 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 7163..7270 - |
| 1680791565.0878131-CDS-P-littoralis_Contig76:7629..7917 | 1680791565.0878131-CDS-P-littoralis_Contig76:7629..7917 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig76 7630..7917 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig76.1.1 >prot_P-littoralis_Contig76.1.1 ID=prot_P-littoralis_Contig76.1.1|Name=mRNA_P-littoralis_Contig76.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=617bp
MEVAFAAFGAIRLAAFLFSSTRQVLKKRKGGGENVGGPGVAPGVSLQIDG GGDTASDMLGVGMELAMKSRNPFQSRKKTNQAITGLSTEFAAHRQETRRD VAEVDLRLQWASQSVAEELVGVRSDLRYGTEQLVRGLAVVRNDLGEVTEK VDGIWTAVTGGVQEVRYAMEEMRGGMNHIESSLYRARKENLEYFKDVSSR LDEMERSMRKQQELHLPMAFKHLNDFMASEGVDLRPLEKAYNCSLKILNL PVQVGALEVHFGAGIVAVSTAYTKLSKEFSPPEAKKRVLRGTFKSITETF DAFLPSPFPSDDPNCRKVATFLLDIVSSICILPPEGVILPQIDSRLVESF GVMCASNPTELLDRYPEVGGAALRALLQSMTLSNLCRTSELLHIDISACE NKADIIQCLFDEGKPMSDDILGRNLPQRIHPASQDGTETKQSDEQKLEDD IAAAYAGLPRSTQWGGKIPNGTSEYGGSYHLDAKRPVGCDNTGQRRQSEQ SDEQRLEDAVAAAFAGLSRSGRWGEEAKSGTSNHGRGRHFDGERPAAFGN MVRRRESGQSDEQRFEDDIAAAYADFPRSVSRGEEAWSGTSEYGEGLNND QQPVEEREPKATEQTQ* back to topmRNA from alignment at P-littoralis_Contig76:2655..14512- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig76.1.1 ID=mRNA_P-littoralis_Contig76.1.1|Name=mRNA_P-littoralis_Contig76.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11858bp|location=Sequence derived from alignment at P-littoralis_Contig76:2655..14512- (Pylaiella littoralis U1_48) GGGGGCGCAGAACCAACCCATGCTGCTCATCAACCTTTTCTACATTAAAA
AGGACAACAGCAGCATCAGTTTTGAGATTCCGGGATGTTATCATCTTGTT
CACGCAAGACCCGATGCTCGACCTTTTCTTTAGAAAAGAGTGACACACGG
GACAGCAAAATGGACACCACCAATCGTGGCAGCTATGTCAAACACAACGC
CAACGCATGTCCGCAGGACCCTCCCCCACACCCTTCCTCCCTGCCCCGCC
CCTTTCCAAAAAGTCCGGAGCGCCAAGTGCCCAAGTCAACCAGCCCACAG
TTGTCTCTTCCGAACGAACGCTTCAGCAAAATCAGGGTGTCGATGTTTTT
CTCGCACGCATCCGACGCTATGAAAACATACGTTACAGGGTCTGTTCATC
CGTCGATAACGTCTTGTCTGTATGGCAGAGAACGTGAAATTATTAAAGAG
TGAATTAGCAAATGCCCTGCACTGTGCGGGCACGTGCAGAAACCTGTACA
AAGCACTATTTCCGAACCTGCGCAAAACTCACACACGCATGCCTGACGCG
GTGCAGTTGCCCCCAGCTCTAGCCGTTGCCAATGACCTCCGCGACAGCAC
CTTCTTCTTCGCCTCTCACGGACAATCCAACTCCCCCTCAAACGACGCGT
CCGTCTCTCTGTCGCTTTCGTGGGACTTGTCCGATTCCCACTCCTGTAGA
CCGTCAGAGTTGTTGTCGTAAATGTCCTGCTCCGATGATCGACCTCTGAG
CTTGAAGTGTCCCCACCCCCGCGCCGAGGCTGCATCCGCTCCATCAGGTG
AGGTGGAGAAAAGAGCGATGGTACGTAGTCGCAACGTCCGAGGAAAGAGT
ACTGTGCAGTGCCTCACACGCGCCTCGGGATAATGAGACGAATGAGGTAG
GTTATAACGACCCCTGCAGTCGTAGGCGAGCAAGTATTCCCTCCACCTGC
AGCCGCACGTCTTGCACTTGCGGTTGACGGCCAGTTCCGGACAGCCACCT
CACGCTATTGCTGTTGTCTTTTGTCGGGGCCAACGTTAGATATCTTAGAC
AGCCGCCGTACGCGATTTCGCGCGTTGAGTTCCTCCGCCTCGCGCCCCTT
GTGTTTCGGGTCGACACCTGACCCTTGTCGTTGAACACCCCTCTCTGAAC
TCGTCTCTTTTCAGATCATCCAGCAAGGGCCCTGTGACGGCGTCGGTCCG
CTTGCTCCACAGGTGCAACGACTCGAACCCCGGACAGGGAGACTATAGTC
CTTCTGAGGCCTAGCCTGAGGATGACGACGCAGATAACGTCGACGTATGA
TAGTACTCGACAACTTCGTGGACGGCGTGGAGCATATTCCCCGCGGTTCA
ACGACCAGAAGCAGCCTCGCACTTGTAGACGGTGGTCACCACGAGCTTGA
TGCACTCGTCGATACCCACAGGCCACACCTCGTTTTCCTTCATGATCAAG
GGTCTATCAAGTACGCCCTCGACCGGCATGCTTCTCAGGCGGCTATCCGC
AATTTTCTCGAAGGTTTGATCGTACGCAGCCGGTAGGAAGTCGCAGTTGA
CGGGACGAGCAGCCGAAGTGATGGATGCGCCAACGCGCTACAAGATAGCC
AGAACGGACCGGCGGAGCTTGTCGTTCTCGCTCAGGCCCAAACCCTGGAA
GTCAGCCTCGAGCCATACCGATTCGTAACCGTCCCGGTGTTCTACAAAAA
CGTGGGAGCGACACCGTTAATTCTCTGCACGGTCATTGTCACCGCCACCG
GAACACGACCGTAAGTTTTCCTCGTGTTGATCCCTGTCGACTGGCGTGAC
AAGCCACCTTTCGATATCCGTCCTTGCTCAATTTTGTTTTTCGTCCATGC
GATGAAACTAGTGACCAGTAGTAGCCTAGCTCGCCGATGTCTGGGCCACG
GTGTCGCTTAATACTCCTGGCCGCGGCGTTTCGCGATTGAAGCAGGAGCT
CCCTCGCTGAACGTTGTGTTACCTCCCTGCCCTCTGCGATGTTCCCGGCG
GCGCTTGCAGAGTCGGTGTTGACACCAACCATCGGCACTGATGACTCTTA
CAGCTTAGCACAGACTCTCGCTGCTCCGTCCGTGCCTGTGCCGTCCACGT
CGTACGAACCGAGGTTTCCGGCACCGATGCCGGGTTTCTAGCCGCCACCC
AAACCAGGCTCACTTCTGACACCATGAAACTCCGCAATTTGGTCCTTTCC
GTTGTCTCTGCCCACCCCTGGTCACTCCTGGGGCACTGTCCGTCCTCCAC
CTGTTGGACGGCGAGGTCGCTCGTTCAAGCTTTCAATCATCGCTCCTGCG
CCGGAAAACAACCCTGTCCAACCCTGTCCTTGCCCTGGGCCGACAACGTG
TGCCGTTGGTCGTCGATTTTCTCCGGGTCTCTGTGGGCCACTGCCTGCTT
CTTGAACTCATTCTGCTGACTCTTATGTCGATCGAGTAGCACACTCGTTA
TCCACGCCGCCCGCCTCCCCAACAATTGCTTCCTCCTCCGTTCATTTCCT
GATCTTGTCCGTCCTCCGGTTTCCCGGAAACGTACGCCGGAATCCGCGGC
AAATTTCTGTGGAGAGGTGCTGGGTTTGTGCATTGCTCTAGCTGCGACTG
CCGCGACTCCCTCGGGCTCGTGGGATGCTGGAGCCGGACAGAACCCAAGA
AATTTAGACAGACCGCACGATACCCACGTCGGTCACGCCGTTCATCACTG
GTGTGGATGGAGCTGGCGGGGACAGTGCTTGCTTACGTCGCTCCTGCACC
GGCGTTGCTACTCTCCTGCGAGGTGTGGACGGGCGGCGATAGTAGGTGCC
GAATTGTGACGCCGGTAGCGTTATCTTCGACGCTCACAGGCCCCCACCAG
CCACCCGCCGCCGCTTTGCCACATACCTTCACCAAAGACAGCTTGGAATC
AACTCTGCTTCGCCCTCCATCACCGCTGCTGCGTTGTGAGGCCAGTGAAC
AGGTTTTCTCGCACCTTGTTTTCCGCATGACCACTGTGTTATACCAATCA
CATGTATGTGTCAACTATTCAGCGACTGACTGGTTGGACAACGGTCAAGG
TACTTATCTAAAGAAAAAATAACTATTTTCCCACGGTTGTGATCCCTTTA
ATCAGCTCACAGGTTTGGAAGTAAGGTGGTCTGCTCTCTTTTTCTTGGAA
CTTGAAAGAATGTGCCTGGCATTTCAGGCACGGACTACTTCTCAAAAAGA
CACCAGAAAAATATCCCATCCCCATGAACCCCGAATGTCACTTTTGTTAG
ATTCACGCCGTAGAAAATAAAAGCGCAGGCTTCCTTGCTTGCCACTCTGT
AAGTCGTACCAGAGGCAAGGGGCGTCGCTGATTACACGGATTACAAGCCT
AGGGGAAGAATCCGAGGTTCAACAGGTAAAAGCTACCCGAGCCCCGAGTG
TGGCCCTTGTCAGCTTCACTTTACTACTATTTCACCAGCAAGCCGCTGAC
TGTTTGGCACAGTGATGAAAGTGCGTTCCTAAAGCGCCGTTCCCGTCGAA
AGCTTAGATGGGCAGAAAAAAACGTTTGTATTTCCATCGTGCAACACTGA
AGAATGACATAAGATTGCTTTACTCTGCGCGCCCCCGTGCAATTTCTCGG
TAAATGGTGCATGGTTAGCCTGGATTATCAAGTTTCACTCTCCGTGTCTA
AAGCTTTCGGGTAGATGACATGGTTTTGGCACACGTTCAGTGCTTGTGCT
TTGCTTAAAGTCAACCTCGACACACTGCTTGAGGTCACAAAACCTCCGCT
TTCATTCGTGCTAGATGGGCAAGCATTCTGTATTATCTTACCATTGAAAC
GCTTTGAAATTGCCACGGGGTCATCAAACCTATTCCTTGGTGGTCAAAAA
CAAATTGAGCGTGATATCTGAACGTCGCGAAGTCGTTCAAGGCTGGGAGT
GACCTAGAGCCACCGCCCTGACACCTTCCAGTAGGCTGCTCGTTTGTGGC
GGGGACTCGCCAGGCTCGCTAAAACCAACTAGTTGAGGCTCGTTCAAAGG
TATTCGCTGACGTGTAAATGACCCCCGGAGGTCGAAGGTGGGATCAAAAC
TACAGGATTTACAACCTTTTGGCGAAATTACTTATCAAAGTAAAACCTTC
TGTGGCTATCAACTCCGTGTACCACTCTCCGTGTCGACGTAGGATACGTG
GTGAAAAGCTCAATCAAGAAGCGGAGATATGCATCGATCGAGTTTTGATA
TTCCAACCCCATCGTTCGAAACGGCCTTAGCTTGTCACAAAGAAATGATA
ATACTCCGCGTAGTTGATACTCGGCCTGTGTAAATATTCTGCTAGCTCTC
CGCACCGGTGATTCATTTGGCCAACCTCGACGCCTTCTGACGGTTGGACG
TGAATTCGAATCCCGCCATTAATAGTGTCACGTGATCCGAACTTTTCTCG
GAACATGCAATTAAAGTCGGTGGGTACAGCACATTCGACCGTACGGTCGA
CGAGGAAAAGGGCAGTCAAATCCTTTTCGAAAACAAAAAAAGGCAACTAC
CGCGTACGGAAGATAATCACAAAACGAAAAAAACGTACTTCAAGAAGTAC
TTGGTATCAACCACGTAACTTTCATCCTGTGTGACCTCTACTGGCACGTC
CAATCCATCTGGCGCCAAGAGTAAAATAGATTTGACAGCACCCAACACAA
GAGACAATACGCGGTGATGCATCTCTCTGGCAAAACAATAATCTCAACCG
CTAAGAACCCGCGTCCTACCGAGTGTGAGCAGCAGATACAGGTGACAGCC
AAGAAGCTTTGACGTCAATACGTGCAGCTGGGGGAGTGAGAAGTTGATCG
CGTAGTTAAGTCAAGTATCAGCTCGAAGTGTGGAATGTTAGCCTTTGGGA
GGTGCCCGCGCGCGTTTGCGTATACGTTCCTACAGTTCTCGCCGAATCGG
TTTTTGGCACGCCTGGTAGACCCCCGCCACATACATGAATCATTCCGCGC
AGTGCAGGTTTGCCCGGAGCCCTTTACGAGCTCGCTTCATTCAGTTTTCA
TGGCACAGTGATTGGTATCGCTGGCTGAAGCTTGGTTGTAAATCGCAATT
CCGGCGTTGAACAATATTGTCGCGAGTGCTGGGATAGGCAAATCTTGGGC
GAAGATTTACCGATTCGGGTCGGTTTCGACCGATTTCCGAATCTCCGCCA
ACACATTTTTTCCGACCAGACGTGAGTCTCATCTTCTTTCTAGGACCTTG
ACAAACAAAAACCTTTTTTGTGAAGATTTGATGACCGCAAGCATAGTTCC
GAAAGCTGTAAAATTAAGTTCTCAATCGCTGCCGCGAGCACTAGACTCCA
TGCGGGAGCTGAATTACATCAGTTATCGTCCACGTTATGATGAACGCTCT
GACTTCACCTACATAAACGACGACTGTCATGCCAGGATCTCTTCTTTCAT
CCCCCGCTAAAGACAACGAAACTAAGACACCATAGCCATCAATTTGACGA
AGTATCTTTTCTCTCACGAAGGCGCCATAGCCATCCTTTAGTCAAAGCAT
TTTTTCATTTACCAAGGCACCAGCAGCTATCATCGTGAAGACTTTGTCTG
TGTACAGAACTCATAGAGCAAGCTGTGCGAAAGCCAATAGAAAACAATGC
CGTAAATGTTTTCACTATTGTAGTATAGCATGTGGTAAATAGGAGGCGAC
ATGAGCGGCTCCCACGACGCCAGAATGAAACTCCGAACCTTTCTCCCCAG
TCCTATCAATCCGTTTTCTACAAGAAACGGCATGTCTGCGAAAACTACAT
GTGGGCGGCCCTGTTTGCCATATATTGATTATTTGTGGCCACAGCTTTCT
CAACCACCAAAAACGTACGAAGTACTTTGAAGTAGTAGAGAGTACTTTGA
CGCTACGACACCCCTTGTGGTCATGGTTGATTCTGTGCTCCTCTTTGTAG
ATCGACCGTGTTGAATGTTGCGTGTGCCGATGAGGCATTGTGTGCCTTTC
ACCATGACTTACACTTCAGTATTTGTTCGTCGGTGCACTACATACTTCGG
TGTATTAAACTTTCAGAGTGGGGTTCATCGTGCAGGAGGGGTGCCGGGCG
CGTTGCTTCTCGACTCTCGGTGTGTCACAGAAAAGTTGATGAATGAGTAT
CGTTTTCTGCCAGGCATAGTCAATTTTGTTCCCCTCGTTGCTGTGGGGGG
ATTTCGCCATTATTTGCATCATTCAAATCTCAACCAAACGTTGTTCTTGT
TTTCAATGTGGCGCATGACCCGATGCCACTGTTTGTTCCTGCGACCCTAA
GTGTCCTGCTCTGTACTTCGAAATAAAAGCTCCCGGCTTCAAATATGTAT
CATTCCCACGCCGGCGAGGTGCATGTTGATAGTTCACCCGCTCTTTCTTT
GCATGGAGCGCACCCCTTGGGCTTGTGTTCACGTATCTTTTTCCATGCAC
CTCGCCTCTACACCTTCTGCATATCCTTTTCTTGCCAATTTATTTTTTAT
CCACAAATATGCATCAAGTCGTTCGCTGTGTGCTGCTGTGTGCTGTTGGA
TCTAAACTACGACCAGCAGCAAGGTTAAACGAAACGCTGCCTTTAATGAA
CCTCCTCCGTGTACGCTGCCGCTTCGTCAGAACACCGTGGGAGCCATGGA
AGTCGCATTCGCAGCCTTTGGGGCAATACGCCTCGCTGCGTTTCTGTTCT
CGAGCACTCGGCAGGTTCTTAAGAAAAGAAAGGGCGGCGGCGAGAATGTA
GGCGGCCCAGGTGTCGCTCCAGGCGTGTCTCTTCAGATCGACGGTGGTGG
CGATACAGCAAGTGACATGTTGGGGGTTGGGATGGAGCTTGCGATGAAGT
CACGAAACCCCTTCCAGTCAAGGAAAAAGACGAACCAGGCAATTACAGGG
TTGTCAACCGAGTTCGCGGCACACCGGCAAGAGGTGCGGGTGGCCTTAAT
GCAGGCCAGAAAGGTCGGGCGATGCCTCGCCTGTTCCTTTCTTTCGCTGA
TACTTCGAAGTACGTTTTGAGCTGTTCGAGTGTTAAATTGATGATACCGT
GCGGGTGCTGAAGTCGAAAATGGCTCATGTTCTTGGACCGTGAACTATTT
GGTTGTTCAAGTATTAGACAACCTCCGGAGCAGGCAAAGCATGGGCGTGT
TGGACATTTCTAAGAGCTGAATGGAACGCCTCTTTTTCTACCCTTGGTAT
TTGTGATTCAGCCGCTGAGCAGCTTCATGGCGCCTCTCTCAGCAAGTCGT
GCTCATGTACATAACCAAACACCCGTTGCGCATCGCATGCAGACAAGGCG
GGACGTCGCGGAGGTCGATCTCAGGCTACAGTGGGCAAGCCAGTCAGTTG
CCGAAGAGCTCGTGGGGGTCCGCAGCGACTTGCGATATGGCACAGAGCAG
GTGAGGCATCTATCGAAACCACTACTGACGCCGATTCTGCATCATTTACG
CCGTTTGTTGTTTTGGGCCTGAAGGGTCTTTAGGATTTCCTCGTCGGGGT
TGGGCATACGATTTGCAGGCTGTGTGAACGTTACGTTCGCGTCCAGTCAA
AAACGTTTATCATATCTTCTTGGTAGTAGACGGAATTAACAATTAACCCA
GGCGCAAAGCGAGTTCTAACCTCCCGCCACGGAAATGCGATTTGTGGCCC
CAAAGCTGGTGCGGGGCCTGGCTGTTGTTCGAAACGACCTCGGAGAAGTC
ACCGAAAAGGTGGATGGGATCTGGACGGCCGTAACGGGTGGAGTTCAGGA
GGTGCGATATGCCATGGAGGAGATGCGAGGCGGTATGAACCACATAGAAT
CCTCACTGTACAGGGCCCGGAAAGAGAATCTCGAATACTTCAAGGATGTT
TCGTCGAGACTGGACGAGATGGAGCGAAGCATGAGAAAGCAACAGGTGGG
TGGCACGGCGAATCAGTTGCTTCAAAAACTGGAAAGACGTGCAGGAATAT
CTGGGATAGATGATAGCAATATCTTCAACGTTGTTCAATTCGCAAGCGTA
CCCCTCAGCACGTAGCCAAAAATTGCTTTTGATGACCGCAGGAACTTCAC
CTGCCGATGGCCTTCAAGCATCTAAACGACTTCATGGCCAGCGAAGGGGT
GGATCTCAGACCTTTAGAAAAGGCTTACAATTGCTCCCTGAAAATCCTCA
ACCTCCCGGTCCAAGTAGGAGCTCTGGAGGTCCATTTCGGAGCCGGGATC
GTCGCCGTGTCGACCGCCTACACTAAATTATCCAAGGTGCGCTGTCCTTG
TTCTGTTGCGATCCTCATTCATTTGCAGCGCACTTTAGGTGGTTCAGTTG
GTTACACTGTATATCGTCTGACGGTTGGACGGGAGTTCCAAATCCGGTGA
CGTCACGCGCTTCGGGTATTCTCTCACACCATGCCCAACAATAGGAGAGA
AAATGAAGTTGCGGATTACTCAAAACCCGATAATACGGTCGAGGAGAGAA
TGGTACGGCCGGATCCTTCTCGTGACAAAAATACGCGGTAGAAATGCTGT
CAACTGTAGACCGACCGTTGCTGATCTCGGTGGCGGTTTCGTGTGTGTCT
TTCATGTCCCTCTCAGGAATTTTCCCCACCGGAGGCGAAGAAGAGGGTCC
TACGGGGAACATTCAAGAGCATCACTGAAACATTTGACGCTTTCTTGCCC
AGCCCTTTCCCTTCCGACGATCCCAACTGCCGAAAGGTGGCGACGTTTCT
GTTGGACATCGTATCCTCCATCTGCATACTTCCACCGGAAGGTGTCATTC
TCCCACAGATAGACAGCCGGCTCGTTGAGTCATTCGGCGTTATGTGCGCC
TCGAATCCGACAGAGCTGCTCGATCGCTACCCTGAGGTGGGGGGAGCCGC
GCTGCGAGCTCTTCTGCAGTCTATGACACTCAGCAACCTCTGCCGAACGT
CCGAGCTCCTGCACATTGATATTTCTGCTTGCGAAAACAAAGCAGATATT
ATTCAGTGTCTCTTTGACGAAGGGAAGCCCATGAGTGATGGTGAGTAGAT
CCCTTCAGATTCACAAAACTGTATCGCAGTTTAACTTGGGACCCCCGGTG
ACAAATCTCTTCGATGACCACGGGTTGTAGTGCTTTGTTGAAACTCTGAT
GCCCCATTGTGTACCGTGCATTCCCTTCATCAGTCAATCCGATCCATCTT
GAAAGTAGCCCACGTCTCGTTCGTCCAACGTCTTGCGGGTGAAACACGCA
GATATTCTAGGGCGCAACCTCCCGCAAAGGATCCACCCAGCCTCGCAAGA
CGGCACCGAAACCAAGCAGTCGGACGAGCAAAAGCTAGAGGACGATATAG
CCGCAGCTTACGCTGGCCTTCCGAGGTCTACTCAGTGGGGCGGGAAAATC
CCTAATGGGACGAGCGAGTACGGCGGAAGCTATCACCTCGATGCCAAACG
GCCCGTCGGGTGTGACAATACGGGGCAAAGGCGACAAAGCGAGCAGTCGG
ACGAGCAGAGGCTAGAGGACGCTGTAGCCGCAGCTTTCGCTGGCCTCTCG
AGATCTGGTCGGTGGGGTGAGGAAGCAAAGAGTGGGACGAGCAACCACGG
TAGAGGTCGTCATTTCGATGGCGAACGGCCCGCCGCGTTTGGTAATATGG
TCAGAAGGCGAGAAAGCGGGCAGTCTGACGAGCAAAGGTTTGAGGATGAT
ATCGCCGCAGCTTACGCTGACTTCCCCAGGTCTGTATCGCGGGGTGAGGA
AGCCTGGAGTGGAACAAGCGAATACGGTGAAGGCCTTAACAATGACCAAC
AGCCCGTCGAAGAAAGGGAACCCAAAGCGACTGAGCAAACACAGTAGTGA
TGGCATGCCACCTGTTGGATGCTGCCATGTTGGCAGCACAGCGAGAGGCG
ATTAAATTACTCATGCAGCAATTCCTATAGACGTAGTCTCCGGAGATCTG
AATGCATGTTTTGGATAGGTGGAAGGCGTTGTGTTGTGAGCAGACTGCGT
GACGTACGTGATGGTTTGAGAGAGGATCTGGCATATGCCCCCTCTCTCAC
TCGGACATACAGTACACCATCAGAATGGCCAGTCACGGCCGCTCAACCCT
ATCCCTGAGTATCGAGCTAACCGGGGCACGAAGCATTGGAATGCACTTGT
GTGATCGATCACAGGATCAAGTGCCTCGTGTTTTCTGATTACCCGCCTTG
CGGGTGGTAGACTATATATGGAAGATTTCAACGCCCGGAGAACAGCGGGA
GATGGCTCGAGAAGCTTCAAAGAAACAAGGTGTGGGAGATCGATACGAGA
TGGATCAACCATTCTTATCTCCAGCGAGGGGTTATTCAACGCAAGTATCC
ACTCTGCATACTGTACGACTTTCGCAGTACCTCTCCGGCCTTTCGAGACT
CGACCCTGCGCCTTCACCTCGCGGAATTCGAGTGGAAGTTAGAGATACTG
TAGACAAGAACAGGATGACGAGCAATTTGCGGAGTTGAAAAATTGCTGCG
TGGAAAGTTAGGGCGGAGCTGATGGAGCATGAGGTGAGATATCGCCGCGC
ATTTAAAGTAGCAGCTGCACATACCGCAGAAGCAGCCAGGGTGACGGAGG
AATCGCCCGTAGCTGTCCAGTCACGGCCGAAGGTCGGAAATGTGCGTATC
TTCCGTATGTGGTAATTGAATCGATAGCAGTACAGTAGTCGACAACAGCA
GTAGCAACAGCCGCAGAGAGGTTATGAGAGGCTGGATGAGACCTGCTGTG
GATAGCCACCGTACCCTTTTGGCCTGGTGCGAAGTTCTTCGAGAAGATAG
GAGGTGAATGTGGGGGTCGCGCCGCCCTTTGGTCGGGGAAAGCGCCGTGG
CGGTTTTTGGGCGGTGGATACAGGAGACGAGATTTATTTTGTCGGAGTGA
TGAGAGTTTTGGAGAAGAGTTTGATATCCGCCCCAGGCACGTCATTTTTT
CATTCAATTTGGTTTGGACTGCGATTTGTTTCGGCACACCGTTATTTGAT
TTGTTTTGGCTGGCTTTTGTCTTCTGCGTAGGGTAATTATACAATTTGCA
TCAAGGACATTCACGAATATCGTTTGTAGTTCACCATTGGGCGCTTGACG
TTTTTTCGGGAGCAGGGAGAGGGCACTAGGCCGCGAAAGCCCGCACGATC
TCAGGATGGTTCGTTGTTGCCAAAGTATGGGAGAGGAGCGCAACTACTGC
ACTTTTCTCTGTTTCAGTGTATCTTTCTTTCGGATAACTTCGTACTTGCT
GTGTCTCCAGATGAATTACGCTTAGTGTTGGGAACTCATTGATTGGATTC
CTTTTCGGACGAGGTGCTTCATGCGTGAGGACTACCTTTATGTAGTTCGA
AGTATTGAATTGTTTTTGGTTTTCGGGATGAACTATTTTGACTCCGCCAC
GAGCAGACTGATTGGACTACTCGTGCGGCAATTAATAAAGTCGTAGTCTT
CGGAGATCTGGATGGCTTTATATGTGGGGCTACTTCGTACGAAAGGATGT
TGTAAGCACTTTGTATGATGTACGTGATGGCTTGAGACAGGATTTGGCAT
GCGCCCCATTCTTCACTCGAGTATATAAAACATCAGACGGCCTGTCACGG
CCGCTTTACCCCCATTCCTGAGCATCGCGCAAGCTGGGCACGCAACATTT
TCGACTAAAAGGGCCGCGAGAGATGCCCTGAAGAACTTTCTAACCTGGCC
AGAGTACGAGCACAAGTATTTTGAGATGCAAGACGGGGCGAAAATTATGC
GTTGCCTCGGTTGGATTCAAAACCTTTTTATTGGTAGTGAAGGAGATGAA
ACTCGTTGCTCTCTCTCTTTTACAGTACACTGTAGGCACCACGAGTCGTC
GGCTATCGCGAAGGACGGAGATGAGACCAGTATTACAGCCATAGAGTACC
AGTATGTATTTCGTGCCTTGCGACAAGAGAGTAATGATGAAGATGTGCCA
CCATTTCA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig76:2655..14512- >mRNA_P-littoralis_Contig76.1.1 ID=mRNA_P-littoralis_Contig76.1.1|Name=mRNA_P-littoralis_Contig76.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1851bp|location=Sequence derived from alignment at P-littoralis_Contig76:2655..14512- (Pylaiella littoralis U1_48) ATGGAAGTCGCATTCGCAGCCTTTGGGGCAATACGCCTCGCTGCGTTTCT GTTCTCGAGCACTCGGCAGGTTCTTAAGAAAAGAAAGGGCGGCGGCGAGA ATGTAGGCGGCCCAGGTGTCGCTCCAGGCGTGTCTCTTCAGATCGACGGT GGTGGCGATACAGCAAGTGACATGTTGGGGGTTGGGATGGAGCTTGCGAT GAAGTCACGAAACCCCTTCCAGTCAAGGAAAAAGACGAACCAGGCAATTA CAGGGTTGTCAACCGAGTTCGCGGCACACCGGCAAGAGACAAGGCGGGAC GTCGCGGAGGTCGATCTCAGGCTACAGTGGGCAAGCCAGTCAGTTGCCGA AGAGCTCGTGGGGGTCCGCAGCGACTTGCGATATGGCACAGAGCAGCTGG TGCGGGGCCTGGCTGTTGTTCGAAACGACCTCGGAGAAGTCACCGAAAAG GTGGATGGGATCTGGACGGCCGTAACGGGTGGAGTTCAGGAGGTGCGATA TGCCATGGAGGAGATGCGAGGCGGTATGAACCACATAGAATCCTCACTGT ACAGGGCCCGGAAAGAGAATCTCGAATACTTCAAGGATGTTTCGTCGAGA CTGGACGAGATGGAGCGAAGCATGAGAAAGCAACAGGAACTTCACCTGCC GATGGCCTTCAAGCATCTAAACGACTTCATGGCCAGCGAAGGGGTGGATC TCAGACCTTTAGAAAAGGCTTACAATTGCTCCCTGAAAATCCTCAACCTC CCGGTCCAAGTAGGAGCTCTGGAGGTCCATTTCGGAGCCGGGATCGTCGC CGTGTCGACCGCCTACACTAAATTATCCAAGGAATTTTCCCCACCGGAGG CGAAGAAGAGGGTCCTACGGGGAACATTCAAGAGCATCACTGAAACATTT GACGCTTTCTTGCCCAGCCCTTTCCCTTCCGACGATCCCAACTGCCGAAA GGTGGCGACGTTTCTGTTGGACATCGTATCCTCCATCTGCATACTTCCAC CGGAAGGTGTCATTCTCCCACAGATAGACAGCCGGCTCGTTGAGTCATTC GGCGTTATGTGCGCCTCGAATCCGACAGAGCTGCTCGATCGCTACCCTGA GGTGGGGGGAGCCGCGCTGCGAGCTCTTCTGCAGTCTATGACACTCAGCA ACCTCTGCCGAACGTCCGAGCTCCTGCACATTGATATTTCTGCTTGCGAA AACAAAGCAGATATTATTCAGTGTCTCTTTGACGAAGGGAAGCCCATGAG TGATGATATTCTAGGGCGCAACCTCCCGCAAAGGATCCACCCAGCCTCGC AAGACGGCACCGAAACCAAGCAGTCGGACGAGCAAAAGCTAGAGGACGAT ATAGCCGCAGCTTACGCTGGCCTTCCGAGGTCTACTCAGTGGGGCGGGAA AATCCCTAATGGGACGAGCGAGTACGGCGGAAGCTATCACCTCGATGCCA AACGGCCCGTCGGGTGTGACAATACGGGGCAAAGGCGACAAAGCGAGCAG TCGGACGAGCAGAGGCTAGAGGACGCTGTAGCCGCAGCTTTCGCTGGCCT CTCGAGATCTGGTCGGTGGGGTGAGGAAGCAAAGAGTGGGACGAGCAACC ACGGTAGAGGTCGTCATTTCGATGGCGAACGGCCCGCCGCGTTTGGTAAT ATGGTCAGAAGGCGAGAAAGCGGGCAGTCTGACGAGCAAAGGTTTGAGGA TGATATCGCCGCAGCTTACGCTGACTTCCCCAGGTCTGTATCGCGGGGTG AGGAAGCCTGGAGTGGAACAAGCGAATACGGTGAAGGCCTTAACAATGAC CAACAGCCCGTCGAAGAAAGGGAACCCAAAGCGACTGAGCAAACACAGTA G back to top
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