mRNA_P-littoralis_Contig757.25.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: D7G8J5_ECTSI (HIT-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J5_ECTSI) HSP 1 Score: 328 bits (840), Expect = 9.240e-109 Identity = 169/191 (88.48%), Postives = 175/191 (91.62%), Query Frame = 1
Query: 1 MSQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 573
MSQSKRKAWDAT+QA GH PTR TKRASGRTVVLSKSMRVVDEETR QVKDARLEALEADNYTED GG+QDDEFALDEDD+RGDR RGRSR GKAP NK KNKGEKD WKERKFKSLHQVLYELTNEL Y GGATA++IEAP+SK PPRAFCSVCGYHGLYTCTRCGSRFCSSKC EQHKETRCLKFAS
Sbjct: 1 MSQSKRKAWDATVQASGHVPTRTKTKRASGRTVVLSKSMRVVDEETRNQVKDARLEALEADNYTEDHGGEQDDEFALDEDDERGDRPRGRSRAGKAPGNKNKNKGEKDPWKERKFKSLHQVLYELTNELSAYPGGATAVSIEAPVSKHPPRAFCSVCGYHGLYTCTRCGSRFCSSKCYEQHKETRCLKFAS 191
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: W7TJ72_9STRA (Zinc finger, HIT-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ72_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.030e-37 Identity = 98/199 (49.25%), Postives = 121/199 (60.80%), Query Frame = 1
Query: 1 MSQSKRKAWDATMQ---AGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKG-----KNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 573
MS +KR AWD M AG +K KR+SGR VLSK+M+VVDEETR++V+DARLEALEADNY E+ G + D+ + E++ GR +V + K + K + RK K L Q +YE E + G LT A S P R FCSVCGY GLYTCTRCG R+CSSKC+E HKETRCLKFA+
Sbjct: 1 MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEE-------GRPKVKREAKRKRSMAQRQQMANKLISSFRK-KPLAQWVYEAGYER---SNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFAT 188
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A485KXM9_9STRA (Aste57867_13128 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXM9_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.590e-32 Identity = 89/193 (46.11%), Postives = 120/193 (62.18%), Query Frame = 1
Query: 16 RKAWDATMQAGGH-APTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKA----PSNKGKNKGEKDVWKERKFKSLHQVLYE----LTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
++ WD TM + G AP KR SGRTV +SK+M+ VDEETR+QV++ARL+ALEADNY E GD+D F LD+D+ + + + +++ KA P+ +G+++ RK KSL Q ++E +TN+ T T L+ S PPR FC VCG YTC RCGSRFCS +C +QHKET CLKF
Sbjct: 7 KRQWDQTMASSGLVAPGHTPKKRFSGRTVKISKAMKHVDEETRQQVRNARLDALEADNYVEATEGDED-MFILDDDEPKKPKSKAKAKQPKAAPLVPTARGRHRI------VRKVKSLRQWIFEECGDVTNDPLSST--PTYLSAAVKPSTHPPRHFCCVCGLFSSYTCGRCGSRFCSVRCGDQHKETGCLKF 190
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: W4G490_9STRA (HIT-type domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G490_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.670e-30 Identity = 85/195 (43.59%), Postives = 108/195 (55.38%), Query Frame = 1
Query: 16 RKAWDATMQAGGHA---PTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKGEKDVWKE--------RKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
++ WD TM + G A + + KR SGRTV +SK+M+ VDEETR+QV++ARL+ALEADNY E G +D F LD+DDD K K K K K + RK KSL Q+++E + T +T +K PPR FC VCG YTC RCGS+FC +C QHKET CLKF
Sbjct: 7 KRQWDQTMASSGLAVPGSAKVSRKRFSGRTVKISKAMKHVDEETRRQVRNARLDALEADNYMESTDGADEDMFVLDDDDD----------AKKPTKPKSKAKANKHQVPQALGRHRMVRKVKSLRQLIFEECGDGMSSTD-INYVTAAVKPAKTPPRHFCCVCGLLSSYTCGRCGSKFCCVRCGNQHKETGCLKF 190
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A024TKA6_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKA6_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.230e-30 Identity = 83/199 (41.71%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 16 RKAWDATMQAGG-------HAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKGEKDVWKE-------RKFKSLHQVLYELTNELCVYTGGA-TALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
++ WD TM + G H P KR SGRT+ +SK+M+ VDEETR+QV++ARL+ALEADNY E+ +D F LDEDDD ++ P +K K KG V + RK KSL +++E ++ +T K PPR FC VCG +Y+C RCGS+FC +C QHKET CLKF
Sbjct: 7 KRQWDQTMASSGVVAPGSGHVP----RKRFSGRTMKISKTMKHVDEETRRQVRNARLDALEADNYMENTDDGDEDMFVLDEDDD------AVAKKASKPKSKAKAKGTLHVPQAQGRHRVVRKIKSLRHLIFEECGDVAPGNDSVINYVTAAVKPPKTPPRHFCCVCGLLSVYSCGRCGSKFCCVRCGNQHKETGCLKF 195
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A7S1U8Q5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Q5_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.590e-29 Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 1
Query: 16 RKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAP-------SNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPM--SKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 573
RK W+ TM+A G ++R+S R +S+ +RVVD ETR+ V++ARL+ALEADNY E+ QDD + + ++ + + + K K+ G K WK+RK+K L QV+YE + TG A+ A M S+ PPRAFCSVCGY G + C RCG R+C +C E HKETRC+KF +
Sbjct: 9 RKGWNETMKAMGAKAPGGNSRRSSSRIATVSRDLRVVDAETREHVRNARLDALEADNYMEEHVA-QDDAYEEVDSEEEAAEPKAKXXXXXXXXXXXXXTTAKAKDPGHK--WKKRKYKPLRQVVYEQGYDA---TGAASVNHSSAAMGPSRFPPRAFCSVCGYFGTFKCPRCGMRYCRRRCQEAHKETRCMKFGT 197
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A067BTG0_SAPPC (HIT-type domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BTG0_SAPPC) HSP 1 Score: 121 bits (304), Expect = 8.040e-29 Identity = 91/199 (45.73%), Postives = 115/199 (57.79%), Query Frame = 1
Query: 4 SQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRV---GKAPSNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTG-GATALTIEAPMSKQPPRAFCSVCGY------HGLYTCTRCGSRFCSSKCSEQHKETRCLKFA 570
S++ ++ WD TM + G A KR SGR V +SK+M+ VDEETRKQV++ARL+ALEADNY E D DDE EDD G ++ +SR KAP + G + V RK KSL Q+++E E G G +T + PPR FC VCGY Y C RCGSRFCS KC +QH+ET CLKF+
Sbjct: 3 SKNAKRQWDQTMASSGLALPTAPRKRNSGRAVKISKAMKHVDEETRKQVRNARLDALEADNYVE-PTEDGDDEDLYIEDDAVGPKKSSKSRAKGKAKAPVVPISSSGRRRV--VRKVKSLAQLVFE---ECGTGEGLGPNYVTAAVKPATTPPRKFCVVCGYPFDRTLFSNYACGRCGSRFCSVKCGDQHRETGCLKFS 195
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A6G0X8S1_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8S1_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.500e-26 Identity = 80/203 (39.41%), Postives = 111/203 (54.68%), Query Frame = 1
Query: 16 RKAWDATMQAGGH-APTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGD------------------RQRGRSRVGKAPSNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
++ WD TM++ G AP + KR SGRTV +SK+M++VDEETR+QV++ARL+ALEADNY E Q D +D F L++ + GR R+ RK KSL Q+++E + + ++ P K+PPR FC+VCG+ Y C RCGS+FCS +C +QHKET CLKF
Sbjct: 7 KRQWDQTMKSSGLVAPGQAPKKRFSGRTVKISKAMKLVDEETRQQVRNARLDALEADNYVE-QTEDDEDMFVLEDXXXXXXXXXXXXXXXXXXATPVVPQALGRRRI------------------VRKVKSLRQLIFEECGDGESSIPNYISAAVKPP--KEPPRHFCAVCGHFSCYNCGRCGSKFCSVQCGDQHKETGCLKF 188
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: K3X0J0_GLOUD (HIT-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0J0_GLOUD) HSP 1 Score: 114 bits (285), Expect = 4.510e-26 Identity = 86/193 (44.56%), Postives = 110/193 (56.99%), Query Frame = 1
Query: 16 RKAWDATM----QAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDD---DRGDRQRGRSRVGKAP-SNKGKNKGEKDVWKERKFKSLHQVLYELTNEL-CVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
+K W+ T+ A A TKR SGRTV LSK+M+ VDEETR V++ARL+ALEADNY D D DD A D DD D GD G GK + K + K K+ K KSL Q+++E V +T+ A S +P R FC VCG+ +Y+CTRCGSR+C KC ++HKE+ CLKF
Sbjct: 8 KKRWNETILRTTAAAATAKRAAKTKRFSGRTVKLSKAMQHVDEETRTIVRNARLDALEADNYGVDAEADGDD--ANDVDDMYIDDGDVPSGAGTPGKDKRARKNRKLATKAKAKKWKVKSLAQLVFEEHGAGDAVDPNMPNYITVAAAASTRPARRFCCVCGFFAVYSCTRCGSRYCRIKCGDEHKESSCLKF 198
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A1V9YMM7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMM7_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.260e-24 Identity = 88/226 (38.94%), Postives = 118/226 (52.21%), Query Frame = 1
Query: 4 SQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKG----------EKDVWKERKFKSLHQVLYELTNELCVYTGGATA----LTIEAPMSKQPPRAFCSVCGY------HGL------------------YTCTRCGSRFCSSKCSEQHKETRCLKF 567
S++ ++ WD TM + G A + KR SGRTV +SK+M+ VDEETRKQV++ARL+ALEADNY E +D++ +++D ++ +SR K K+KG + V RK KSL +++E TG T +T +K PPR FC VCGY H YTC RCGSRFCS +C +QHKET CLKF
Sbjct: 3 SKNAKRQWDQTMASSGLALPQAPRKRYSGRTVKISKAMKHVDEETRKQVRNARLDALEADNYVEPTDDGEDEDLYIEDDSGTPSKKPLKSRA------KAKSKGTVVPVSISGRRRIV---RKVKSLAHLIFEECG-----TGEDTQRPNYITAAVKPAKTPPRHFCVVCGYPFRYSLHAACTSKTVLRSLTRRTLFSDYTCGRCGSRFCSVRCGDQHKETGCLKF 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig757.25.3 >prot_P-littoralis_Contig757.25.3 ID=prot_P-littoralis_Contig757.25.3|Name=mRNA_P-littoralis_Contig757.25.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=192bp MSQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVback to top mRNA from alignment at P-littoralis_Contig757:55682..59076- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig757.25.3 ID=mRNA_P-littoralis_Contig757.25.3|Name=mRNA_P-littoralis_Contig757.25.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=3395bp|location=Sequence derived from alignment at P-littoralis_Contig757:55682..59076- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig757:55682..59076- >mRNA_P-littoralis_Contig757.25.3 ID=mRNA_P-littoralis_Contig757.25.3|Name=mRNA_P-littoralis_Contig757.25.3|organism=Pylaiella littoralis U1_48|type=CDS|length=576bp|location=Sequence derived from alignment at P-littoralis_Contig757:55682..59076- (Pylaiella littoralis U1_48)back to top |