mRNA_P-littoralis_Contig757.25.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig757.25.3
Unique NamemRNA_P-littoralis_Contig757.25.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: D7G8J5_ECTSI (HIT-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J5_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 9.240e-109
Identity = 169/191 (88.48%), Postives = 175/191 (91.62%), Query Frame = 1
Query:    1 MSQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 573
            MSQSKRKAWDAT+QA GH PTR  TKRASGRTVVLSKSMRVVDEETR QVKDARLEALEADNYTED GG+QDDEFALDEDD+RGDR RGRSR GKAP NK KNKGEKD WKERKFKSLHQVLYELTNEL  Y GGATA++IEAP+SK PPRAFCSVCGYHGLYTCTRCGSRFCSSKC EQHKETRCLKFAS
Sbjct:    1 MSQSKRKAWDATVQASGHVPTRTKTKRASGRTVVLSKSMRVVDEETRNQVKDARLEALEADNYTEDHGGEQDDEFALDEDDERGDRPRGRSRAGKAPGNKNKNKGEKDPWKERKFKSLHQVLYELTNELSAYPGGATAVSIEAPVSKHPPRAFCSVCGYHGLYTCTRCGSRFCSSKCYEQHKETRCLKFAS 191          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: W7TJ72_9STRA (Zinc finger, HIT-type n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ72_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.030e-37
Identity = 98/199 (49.25%), Postives = 121/199 (60.80%), Query Frame = 1
Query:    1 MSQSKRKAWDATMQ---AGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKG-----KNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 573
            MS +KR AWD  M    AG     +K  KR+SGR  VLSK+M+VVDEETR++V+DARLEALEADNY E+ G + D+ +   E++       GR +V +    K      +    K +   RK K L Q +YE   E    + G   LT  A  S  P R FCSVCGY GLYTCTRCG R+CSSKC+E HKETRCLKFA+
Sbjct:    1 MSTNKRSAWDEAMGLAGAGIKQTKKKGAKRSSGRQAVLSKAMQVVDEETRREVRDARLEALEADNYVENAGEEMDEAYVDSEEE-------GRPKVKREAKRKRSMAQRQQMANKLISSFRK-KPLAQWVYEAGYER---SNGPNYLTAAAQPSSLPTRCFCSVCGYWGLYTCTRCGMRYCSSKCAETHKETRCLKFAT 188          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A485KXM9_9STRA (Aste57867_13128 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXM9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.590e-32
Identity = 89/193 (46.11%), Postives = 120/193 (62.18%), Query Frame = 1
Query:   16 RKAWDATMQAGGH-APTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKA----PSNKGKNKGEKDVWKERKFKSLHQVLYE----LTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
            ++ WD TM + G  AP     KR SGRTV +SK+M+ VDEETR+QV++ARL+ALEADNY E   GD+D  F LD+D+ +  + + +++  KA    P+ +G+++        RK KSL Q ++E    +TN+    T   T L+     S  PPR FC VCG    YTC RCGSRFCS +C +QHKET CLKF
Sbjct:    7 KRQWDQTMASSGLVAPGHTPKKRFSGRTVKISKAMKHVDEETRQQVRNARLDALEADNYVEATEGDED-MFILDDDEPKKPKSKAKAKQPKAAPLVPTARGRHRI------VRKVKSLRQWIFEECGDVTNDPLSST--PTYLSAAVKPSTHPPRHFCCVCGLFSSYTCGRCGSRFCSVRCGDQHKETGCLKF 190          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: W4G490_9STRA (HIT-type domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G490_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.670e-30
Identity = 85/195 (43.59%), Postives = 108/195 (55.38%), Query Frame = 1
Query:   16 RKAWDATMQAGGHA---PTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKGEKDVWKE--------RKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
            ++ WD TM + G A     + + KR SGRTV +SK+M+ VDEETR+QV++ARL+ALEADNY E   G  +D F LD+DDD            K    K K K  K    +        RK KSL Q+++E   +    T     +T     +K PPR FC VCG    YTC RCGS+FC  +C  QHKET CLKF
Sbjct:    7 KRQWDQTMASSGLAVPGSAKVSRKRFSGRTVKISKAMKHVDEETRRQVRNARLDALEADNYMESTDGADEDMFVLDDDDD----------AKKPTKPKSKAKANKHQVPQALGRHRMVRKVKSLRQLIFEECGDGMSSTD-INYVTAAVKPAKTPPRHFCCVCGLLSSYTCGRCGSKFCCVRCGNQHKETGCLKF 190          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A024TKA6_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKA6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 8.230e-30
Identity = 83/199 (41.71%), Postives = 110/199 (55.28%), Query Frame = 1
Query:   16 RKAWDATMQAGG-------HAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKGEKDVWKE-------RKFKSLHQVLYELTNELCVYTGGA-TALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
            ++ WD TM + G       H P     KR SGRT+ +SK+M+ VDEETR+QV++ARL+ALEADNY E+     +D F LDEDDD        ++    P +K K KG   V +        RK KSL  +++E   ++          +T      K PPR FC VCG   +Y+C RCGS+FC  +C  QHKET CLKF
Sbjct:    7 KRQWDQTMASSGVVAPGSGHVP----RKRFSGRTMKISKTMKHVDEETRRQVRNARLDALEADNYMENTDDGDEDMFVLDEDDD------AVAKKASKPKSKAKAKGTLHVPQAQGRHRVVRKIKSLRHLIFEECGDVAPGNDSVINYVTAAVKPPKTPPRHFCCVCGLLSVYSCGRCGSKFCCVRCGNQHKETGCLKF 195          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A7S1U8Q5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Q5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.590e-29
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 1
Query:   16 RKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAP-------SNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPM--SKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS 573
            RK W+ TM+A G       ++R+S R   +S+ +RVVD ETR+ V++ARL+ALEADNY E+    QDD +   + ++     + +              + K K+ G K  WK+RK+K L QV+YE   +    TG A+     A M  S+ PPRAFCSVCGY G + C RCG R+C  +C E HKETRC+KF +
Sbjct:    9 RKGWNETMKAMGAKAPGGNSRRSSSRIATVSRDLRVVDAETREHVRNARLDALEADNYMEEHVA-QDDAYEEVDSEEEAAEPKAKXXXXXXXXXXXXXTTAKAKDPGHK--WKKRKYKPLRQVVYEQGYDA---TGAASVNHSSAAMGPSRFPPRAFCSVCGYFGTFKCPRCGMRYCRRRCQEAHKETRCMKFGT 197          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A067BTG0_SAPPC (HIT-type domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BTG0_SAPPC)

HSP 1 Score: 121 bits (304), Expect = 8.040e-29
Identity = 91/199 (45.73%), Postives = 115/199 (57.79%), Query Frame = 1
Query:    4 SQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRV---GKAPSNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTG-GATALTIEAPMSKQPPRAFCSVCGY------HGLYTCTRCGSRFCSSKCSEQHKETRCLKFA 570
            S++ ++ WD TM + G A      KR SGR V +SK+M+ VDEETRKQV++ARL+ALEADNY E    D DDE    EDD  G ++  +SR     KAP     + G + V   RK KSL Q+++E   E     G G   +T     +  PPR FC VCGY         Y C RCGSRFCS KC +QH+ET CLKF+
Sbjct:    3 SKNAKRQWDQTMASSGLALPTAPRKRNSGRAVKISKAMKHVDEETRKQVRNARLDALEADNYVE-PTEDGDDEDLYIEDDAVGPKKSSKSRAKGKAKAPVVPISSSGRRRV--VRKVKSLAQLVFE---ECGTGEGLGPNYVTAAVKPATTPPRKFCVVCGYPFDRTLFSNYACGRCGSRFCSVKCGDQHRETGCLKFS 195          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A6G0X8S1_9STRA (HIT-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8S1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.500e-26
Identity = 80/203 (39.41%), Postives = 111/203 (54.68%), Query Frame = 1
Query:   16 RKAWDATMQAGGH-APTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGD------------------RQRGRSRVGKAPSNKGKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
            ++ WD TM++ G  AP +   KR SGRTV +SK+M++VDEETR+QV++ARL+ALEADNY E Q  D +D F L++                        +  GR R+                   RK KSL Q+++E   +         +  ++ P  K+PPR FC+VCG+   Y C RCGS+FCS +C +QHKET CLKF
Sbjct:    7 KRQWDQTMKSSGLVAPGQAPKKRFSGRTVKISKAMKLVDEETRQQVRNARLDALEADNYVE-QTEDDEDMFVLEDXXXXXXXXXXXXXXXXXXATPVVPQALGRRRI------------------VRKVKSLRQLIFEECGDGESSIPNYISAAVKPP--KEPPRHFCAVCGHFSCYNCGRCGSKFCSVQCGDQHKETGCLKF 188          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: K3X0J0_GLOUD (HIT-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0J0_GLOUD)

HSP 1 Score: 114 bits (285), Expect = 4.510e-26
Identity = 86/193 (44.56%), Postives = 110/193 (56.99%), Query Frame = 1
Query:   16 RKAWDATM----QAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDD---DRGDRQRGRSRVGKAP-SNKGKNKGEKDVWKERKFKSLHQVLYELTNEL-CVYTGGATALTIEAPMSKQPPRAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKF 567
            +K W+ T+     A   A     TKR SGRTV LSK+M+ VDEETR  V++ARL+ALEADNY  D   D DD  A D DD   D GD   G    GK   + K +    K   K+ K KSL Q+++E       V       +T+ A  S +P R FC VCG+  +Y+CTRCGSR+C  KC ++HKE+ CLKF
Sbjct:    8 KKRWNETILRTTAAAATAKRAAKTKRFSGRTVKLSKAMQHVDEETRTIVRNARLDALEADNYGVDAEADGDD--ANDVDDMYIDDGDVPSGAGTPGKDKRARKNRKLATKAKAKKWKVKSLAQLVFEEHGAGDAVDPNMPNYITVAAAASTRPARRFCCVCGFFAVYSCTRCGSRYCRIKCGDEHKESSCLKF 198          
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Match: A0A1V9YMM7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMM7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.260e-24
Identity = 88/226 (38.94%), Postives = 118/226 (52.21%), Query Frame = 1
Query:    4 SQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQVKDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNKGKNKG----------EKDVWKERKFKSLHQVLYELTNELCVYTGGATA----LTIEAPMSKQPPRAFCSVCGY------HGL------------------YTCTRCGSRFCSSKCSEQHKETRCLKF 567
            S++ ++ WD TM + G A  +   KR SGRTV +SK+M+ VDEETRKQV++ARL+ALEADNY E     +D++  +++D     ++  +SR       K K+KG           + V   RK KSL  +++E        TG  T     +T     +K PPR FC VCGY      H                    YTC RCGSRFCS +C +QHKET CLKF
Sbjct:    3 SKNAKRQWDQTMASSGLALPQAPRKRYSGRTVKISKAMKHVDEETRKQVRNARLDALEADNYVEPTDDGEDEDLYIEDDSGTPSKKPLKSRA------KAKSKGTVVPVSISGRRRIV---RKVKSLAHLIFEECG-----TGEDTQRPNYITAAVKPAKTPPRHFCVVCGYPFRYSLHAACTSKTVLRSLTRRTLFSDYTCGRCGSRFCSVRCGDQHKETGCLKF 214          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig757.25.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8J5_ECTSI9.240e-10988.48HIT-type domain-containing protein n=2 Tax=Ectocar... [more]
W7TJ72_9STRA1.030e-3749.25Zinc finger, HIT-type n=1 Tax=Nannochloropsis gadi... [more]
A0A485KXM9_9STRA2.590e-3246.11Aste57867_13128 protein n=1 Tax=Aphanomyces stella... [more]
W4G490_9STRA2.670e-3043.59HIT-type domain-containing protein n=7 Tax=Aphanom... [more]
A0A024TKA6_9STRA8.230e-3041.71HIT-type domain-containing protein n=1 Tax=Aphanom... [more]
A0A7S1U8Q5_9STRA1.590e-2941.54Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A067BTG0_SAPPC8.040e-2945.73HIT-type domain-containing protein n=3 Tax=Saprole... [more]
A0A6G0X8S1_9STRA2.500e-2639.41HIT-type domain-containing protein n=1 Tax=Aphanom... [more]
K3X0J0_GLOUD4.510e-2644.56HIT-type domain-containing protein n=1 Tax=Globisp... [more]
A0A1V9YMM7_9STRA1.260e-2438.94Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig757contigP-littoralis_Contig757:55682..59076 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8J5
Preferred nameZNHIT1
PFAMszf-HIT
Model size1320
Max annot lvl2759|Eukaryota
KEGG koko:K11663,ko:K12846
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000228,GO:0000785,GO:0000790,GO:0000812,GO:0002682,GO:0002694,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006950,GO:0006952,GO:0006996,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009890,GO:0009892,GO:0009909,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010629,GO:0010948,GO:0016043,GO:0019219,GO:0019222,GO:0019899,GO:0031056,GO:0031063,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031491,GO:0031974,GO:0031981,GO:0032268,GO:0032944,GO:0032991,GO:0033043,GO:0033044,GO:0034728,GO:0040008,GO:0042127,GO:0042129,GO:0042742,GO:0042802,GO:0042826,GO:0043044,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045786,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0048580,GO:0048638,GO:0048831,GO:0050670,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051239,GO:0051246,GO:0051249,GO:0051252,GO:0051253,GO:0051276,GO:0051704,GO:0051707,GO:0051726,GO:0060255,GO:0065007,GO:0070013,GO:0070316,GO:0070317,GO:0070603,GO:0070663,GO:0071824,GO:0071840,GO:0080090,GO:0090311,GO:0097346,GO:0098542,GO:1902275,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1904949,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2001141
Exons6
Evalue1.19e-113
EggNOG OGsKOG3362@1|root,KOG3362@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, HIT-type
Ec32 orthologEc-14_003240.1
Descriptionregulation of histone deacetylation
Cds size576
COG categoryU
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig757.25.3prot_P-littoralis_Contig757.25.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig757 56426..59076 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791562.6419036-UTR-P-littoralis_Contig757:55681..564251680791562.6419036-UTR-P-littoralis_Contig757:55681..56425Pylaiella littoralis U1_48UTRP-littoralis_Contig757 55682..56425 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791562.6548371-CDS-P-littoralis_Contig757:56425..566261680791562.6548371-CDS-P-littoralis_Contig757:56425..56626Pylaiella littoralis U1_48CDSP-littoralis_Contig757 56426..56626 -
1680791562.6678941-CDS-P-littoralis_Contig757:57038..570841680791562.6678941-CDS-P-littoralis_Contig757:57038..57084Pylaiella littoralis U1_48CDSP-littoralis_Contig757 57039..57084 -
1680791562.6810505-CDS-P-littoralis_Contig757:57523..576511680791562.6810505-CDS-P-littoralis_Contig757:57523..57651Pylaiella littoralis U1_48CDSP-littoralis_Contig757 57524..57651 -
1680791562.690705-CDS-P-littoralis_Contig757:58161..582151680791562.690705-CDS-P-littoralis_Contig757:58161..58215Pylaiella littoralis U1_48CDSP-littoralis_Contig757 58162..58215 -
1680791562.713594-CDS-P-littoralis_Contig757:58543..586021680791562.713594-CDS-P-littoralis_Contig757:58543..58602Pylaiella littoralis U1_48CDSP-littoralis_Contig757 58544..58602 -
1680791562.7279546-CDS-P-littoralis_Contig757:58988..590761680791562.7279546-CDS-P-littoralis_Contig757:58988..59076Pylaiella littoralis U1_48CDSP-littoralis_Contig757 58989..59076 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig757.25.3

>prot_P-littoralis_Contig757.25.3 ID=prot_P-littoralis_Contig757.25.3|Name=mRNA_P-littoralis_Contig757.25.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=192bp
MSQSKRKAWDATMQAGGHAPTRKTTKRASGRTVVLSKSMRVVDEETRKQV
KDARLEALEADNYTEDQGGDQDDEFALDEDDDRGDRQRGRSRVGKAPSNK
GKNKGEKDVWKERKFKSLHQVLYELTNELCVYTGGATALTIEAPMSKQPP
RAFCSVCGYHGLYTCTRCGSRFCSSKCSEQHKETRCLKFAS*
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mRNA from alignment at P-littoralis_Contig757:55682..59076-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig757.25.3 ID=mRNA_P-littoralis_Contig757.25.3|Name=mRNA_P-littoralis_Contig757.25.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=3395bp|location=Sequence derived from alignment at P-littoralis_Contig757:55682..59076- (Pylaiella littoralis U1_48)
ATGTCCCAAAGTAAGAGGAAGGCATGGGATGCTACGATGCAAGCCGGGGG TCATGCGCCAACACGAAAAACAACGAAACGGGCTTCAGGTAAGCGCACCT CACCTCAAAAATATCGAACATAATTCCAGGTCCATGAGTTCGTAGCTGTC CAAGACACTTTGGCACACACGGCCTCTTCCTGGACATATGGATTATTTTG CGCTCGCCTGACATGGGACGATTGCCCCTATCCCCTGGTCATCCGCACCC GATTACTGTTGGCACGTAAACTCATACATGTACGTCTTTCACGGTATCAC ACCTGGTAGTATGTAGACGGGATGGAGAAGCTCTCCTGCTTTTTCGTCGT GCAAGTCTGTCTCAGAGAGTCAGAGAGTCAGTGCGGAACCGTTGGTCTCC ACCTTGTCGGCGGCAAACTCTTTCGCGGAACAACCCCAACCACTTGTGCC CCTCCCTGCCCCCATGCTGAAAAGGGCGGACGGTGGTGCTCAGCAAATCG ATGCGAGTGGTCGACGAAGAAACACGAAAGCAGGTTTGTGCCGTGGCGCT GTCGTAGCACAAGCGGGGATCATTTTAACCACAGAAATTGATTCACAGCA GCCGACGCACACCCAGCACACCTCGACCTCGGTTTGACTGGCGACTGCTG GTACTATATTGTACGTGAGGTAGAGGTGCACTCAGCACTCAGCGTGTGAT AATTTTCGACGACATGCGCTTACGCATGCGATCATGATCCAGAGGGCGAG TGGGATCGCCCATGTATGCACCGCAGGCTTGTGGTTTGCTGGTGGCTTGC CTGACTTTCTCGCGCTGTTGCTGGGTGCTTGTCGCGCATGTCCTTCCCTC CCGTAACATAGGTCAAGGACGCGCGTCTGGAAGCGTTGGAAGCCGACAAC TACACCGAAGACCAGGTAAATCAGGGGAGAGACCTCTTTATCTCTTTTGT ACATCGATTACACTTGGATGCCGCTGCTACTGCTGTGTGTGTTTTCTGTC CGCCTTGCTACATACGGATCAAATTGTTGTCTATGATGTGATTTCGGTAA TTTTAGGATTCAGTGGCTCGCGCGCGCACACTGCTAAGTAATGCTATCTT GATCCTATTCGAGCTTCAATGTTTCGCGACCATCACATCGTCCATGTAGT GCATACCACCACGTCCTTTGCTGGTACCTAGCATCGGTGGTTTTCCTCAG ACTGCAAGGCGCCGGTACGAAAGAGGGTATGATACTCCTGTACTGCTGCA CTCGTGTGCGCCTGCCTCGGTGGAAAGCTACAGCAGTAGTGGGCTCGAGA TGGATGCTTCGTATTATACGTACGAAAGGTGGGTCGCGCGAGAAATTGAA AGCAATAAATCATACCGTATGGTATCTGGTATGCCCCACAACTGCCCTTA CCCTCGTCAATGTCGGTGTTTTCAGGGTGGGGATCAAGATGATGAGTTTG CCCTGGACGAAGACGACGACCGAGGGGATCGTCAGAGGGGCAGGAGCCGG GTGGGCAAGGCGCCAAGCAACAAGGGAAAGAACAAAGGAGAGAAAGATGT GTGGTGAGAGTCGTACCGTACAGCAGCGCCCGGAGTGGGGAGGGGCGAGG CGGGCATTTGTTATTGCCTACCCTTGGCCTTTTCCACTTGAACCGTCGAC CATACCCTTTCGAGACCGATATTTTTTCAGATTGCGGGAGGAAGCTACTG TAAGCCTGCGATCGGTGTTACTACAGCGATGGTCACCACCGTGTGGGTTT GGTTCCTTGAAAGGCCTTCCCTTACTCCCCCACACAAAACAATGCCCAAC AAACTCGCGGCAGTCTTTGTGGAATATCGCCAGGATTATCTGGTTTGGTT TTTTAACAGGTCCCTCTTTCCCCCAAGCATTATCACGCCCTACAACCTGA CCCTGCCGAGATTTTTTGTTGTGTGTCGAATTTTGCCCGCCGCTTGATCT CCTCCTGGTGGCGTCTCATTGCTGCAACTACATTCAACGCAGGAAAGAGC GAAAGTTCAAGAGCCTGCACCAAGTCCTCTACGAACTGGTGAGCCCTCCT GCGTGCGTCTCAAAAAGGGGAATCGCCGGGGCCACCGTGCGGTCCATGTT AGCGCATGAAGAACGCGCCTGGATTTGCGAGTTTTGCTTTTTCGTTGTCG TTTTTTCTTGTCACTCGCCGGGCGAATGGAACTTGGGACATCCCGGTTTC ACGCCTCGGAAATGTACCAGTAGAGAGTTCCCTCCGAACGCAAAAATCCC ACCCGAGCTTGTGAAGAAAGATGGAAAGTCAGGTCGCCCAGATGCGATTA GTCGGTTCTAACGGGCATTGCAGTTAGGACATCCCCCCCCCGGCGCGCGT GCGCGCTTCCCCTGTTTTCAGCTCCCTGTACCTTCATGCGAGATTTCGGT ATGCGGCCACACTGATTCTCTGTGCGTTCCGATTCTTTATCTATCTGCAG ACGAACGAGCTCTGCGTGTATACGGGTGGAGCAACGGCGTTAACAATCGA GGCGCCCATGTCGAAGCAACCGCCGCGGGCGTTCTGTTCGGTGTGCGGCT ACCACGGGCTGTACACGTGTACACGCTGCGGGTCTCGGTTCTGCAGCTCC AAGTGCTCCGAGCAGCACAAGGAGACCCGTTGCCTCAAGTTCGCGTCGTA AGAGATACTTCGGATACTTCTGGCACGCGACGGTGGAAGACAGTTGTCGG TGGTGGTGGCAATTTAGCGCCTGCATGCGGGTTCTCGGATATTCGTGTTC ACATTATATTGTTAGTATTGGGGTGGGGCGGCGGGCGGCGGGGGGGGCTA GTTGGCTCGTTTTCGGGAAGGTCAAATTCTCTGTGAGGATGGGCACATGA TGTTGGTCGTGAGTCGGACCTACTTGGGGCACAGTTCTTGGATTGGTCGG TTTGAGTATGCGTTTGAGGTATGGAAGCGTCGTCATGGCCTCGACAACAG TCTGCCGGTTCATTTTGTTGGTGTACGTATCACATATGGGACTAGGGTTG GGGTTTATAGAGAGGGTTTCGCGTTAGAGACCGTTGTGGGTTACGTCTCT GCATGATTTATTGACAACAATAAATGAACACAATGACAAAAATGACAAAA AAAACCCGGGTAATTGAGAAGTTGTCGTTTTTTCGAACGCTTCGGCTATT GTTTTCCCCCGGATCCAACGTATACACGTCCAGTGGAGAGAACAGAAGCC TTTCGGACTTGAGGGACCACTCATGCGGAGATGGGTGAGTCTAGCCATTG CTTTTTCACTACATATTTTGCCGCACGAATGGTGTTCGTTGATCGAATGC CTTATCGAGCCTGAGAACTCGTGGTGGAGTTACCGAGGGTGCGCATGGAT AACGAGCAAGCCCCACACCAGAAAACAGGTTGAAATAATTAGCGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig757:55682..59076-

>mRNA_P-littoralis_Contig757.25.3 ID=mRNA_P-littoralis_Contig757.25.3|Name=mRNA_P-littoralis_Contig757.25.3|organism=Pylaiella littoralis U1_48|type=CDS|length=576bp|location=Sequence derived from alignment at P-littoralis_Contig757:55682..59076- (Pylaiella littoralis U1_48)
ATGTCCCAAAGTAAGAGGAAGGCATGGGATGCTACGATGCAAGCCGGGGG
TCATGCGCCAACACGAAAAACAACGAAACGGGCTTCAGGGCGGACGGTGG
TGCTCAGCAAATCGATGCGAGTGGTCGACGAAGAAACACGAAAGCAGGTC
AAGGACGCGCGTCTGGAAGCGTTGGAAGCCGACAACTACACCGAAGACCA
GGGTGGGGATCAAGATGATGAGTTTGCCCTGGACGAAGACGACGACCGAG
GGGATCGTCAGAGGGGCAGGAGCCGGGTGGGCAAGGCGCCAAGCAACAAG
GGAAAGAACAAAGGAGAGAAAGATGTGTGGAAAGAGCGAAAGTTCAAGAG
CCTGCACCAAGTCCTCTACGAACTGACGAACGAGCTCTGCGTGTATACGG
GTGGAGCAACGGCGTTAACAATCGAGGCGCCCATGTCGAAGCAACCGCCG
CGGGCGTTCTGTTCGGTGTGCGGCTACCACGGGCTGTACACGTGTACACG
CTGCGGGTCTCGGTTCTGCAGCTCCAAGTGCTCCGAGCAGCACAAGGAGA
CCCGTTGCCTCAAGTTCGCGTCGTAA
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