mRNA_P-littoralis_Contig75.103.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: D8LF00_ECTSI (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF00_ECTSI) HSP 1 Score: 471 bits (1212), Expect = 4.990e-156 Identity = 217/274 (79.20%), Postives = 246/274 (89.78%), Query Frame = 3
Query: 183 MEEYSMRRLSDLSAALETEASLGGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFE 1004
ME+Y+MRRLS+LSA LE E+ LGGT L+IVDPQ DFHEGG+LA+ GA DDAERIA + + IDE+VVTLDSHHR+DIAHPMFWTDG G GS+PAPFTLI SEDIQ GTW+PV+ EHKEHC+EYTR+LE+GGKFTLCVWPEHCLIGTPGH+V+PV+N+AIQEWAVA++ VTYVHKGQHPLTEHYSCFAAEVPV GDEAN+KGR +LAKLCARD V+VCGQASSHCVNFSARDLAAAWKRTT G L +++ARRRMGSLVLLKDGMSPV GFE
Sbjct: 1 MEDYNMRRLSNLSAVLEAESGLGGTALLIVDPQADFHEGGALAIQGASDDAERIAQLVTDQSEHIDEIVVTLDSHHRMDIAHPMFWTDGRGGGSYPAPFTLIKSEDIQNGTWLPVEEEHKEHCIEYTRKLEEGGKFTLCVWPEHCLIGTPGHAVNPVINKAIQEWAVAKKRSVTYVHKGQHPLTEHYSCFAAEVPVAGDEANEKGRILLAKLCARDVVVVCGQASSHCVNFSARDLAAAWKRTTAGGLNEDVARRRMGSLVLLKDGMSPVTGFE 274
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A835YMN5_9STRA (Isochorismatase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN5_9STRA) HSP 1 Score: 281 bits (718), Expect = 8.950e-84 Identity = 144/256 (56.25%), Postives = 168/256 (65.62%), Query Frame = 3
Query: 237 EASLGGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFE 1004
EA G L+I+DPQVDFH GGSLAV GA DAERIA F+ H DID++VVTLDSHHR DI+ P FW SG G+ PAPFT ITSE ++ G W PV EH+ HC Y LE G+FT VWPEHCLIGT G +V P +N A+Q+WA+ARR V YV KG +PLTEH+S FAAEVP+ D A++A+L R RV VCGQA SHCVN S RDL W A R +VLL+DG SPV GFE
Sbjct: 7 EAKPEGAVLLIIDPQVDFHPGGSLAVAGADADAERIAAFLRRHEQDIDDVVVTLDSHHRFDISQPGFWV--SGEGNPPAPFTAITSEQVKLGLWKPVLEEHQAHCQRYCEALEARGRFTHVVWPEHCLIGTVGQTVEPRINAALQDWALARRRAVHYVAKGANPLTEHFSAFAAEVPLDSDPGTALNAALVARLRRRARVYVCGQALSHCVNRSVRDLVEHW------------APRSAADIVLLRDGASPVAGFE 248
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A2E7CJX7_9PROT (Isochorismatase domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2E7CJX7_9PROT) HSP 1 Score: 258 bits (659), Expect = 2.160e-75 Identity = 125/248 (50.40%), Postives = 162/248 (65.32%), Query Frame = 3
Query: 261 LMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFE 1004
L I+DPQ DFH GGSLAVPG+ +D+ RIA+FI ++ + IDE+ V+LDSHHR+ IAH +FW D +G HP PFTLI +D+ G W PV + E+ YT+ LE G+F +C+WPEHCLIGT GH+V PV+N+A+QEW + V Y+HKG + LTE YS AAEVP+Q D +L KL D +L+CG+A SHCVN++ RDLAA W + +LVLL D S VPGFE
Sbjct: 12 LFIIDPQNDFHPGGSLAVPGSNEDSGRIANFIVDNASLIDEIYVSLDSHHRIHIAHGVFWNDQNGE--HPPPFTLIKHQDVISGKWTPVNPDLLEYAKHYTKSLEDKGRFIVCIWPEHCLIGTAGHAVVPVLNDALQEWVKIKMKPVEYIHKGMNCLTEMYSALAAEVPLQDDPTTSMNLELLKKLNTADNILICGEAKSHCVNYTMRDLAAHWTK-------------EQSALVLLSDCTSAVPGFE 244
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A6G0XHW0_9STRA (Isochorismatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHW0_9STRA) HSP 1 Score: 257 bits (656), Expect = 7.720e-75 Identity = 129/265 (48.68%), Postives = 164/265 (61.89%), Query Frame = 3
Query: 222 AALETEASLGGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFEVGGQ 1016
A +E S GG TL+I+DPQ DFH GGSLA+P A +DA R A FI NHLNDID+L++TLDSH RL IAH +FWT+ G P PFTLITSED+ G W E + + EYT+ LE+GG+FTLC+WPEHC+IGTPG ++ ++EA EW R + YVHKG + TEHYS A+V + D + ++A+L + V VCGQA SHCVNF+ RDL + W G + +L D S V GFE GQ
Sbjct: 9 AHVERSHSQGGVTLLIIDPQRDFHPGGSLAIPSADEDAGRTAAFIRNHLNDIDQLIITLDSHQRLHIAHSVFWTNEKGES--PPPFTLITSEDVANGKWKARSPEVQVYVYEYTKALEQGGRFTLCIWPEHCIIGTPGQAIVDPIHEAALEWTAHSRKPIKYVHKGSNCFTEHYSALRADVELPHDPSTSLDHKLIAQLKSSSIVAVCGQALSHCVNFTVRDLVSLWPE---------------GRVAVLVDCSSSVVGFESSGQ 256
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A7S3PLJ4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLJ4_9STRA) HSP 1 Score: 249 bits (635), Expect = 8.520e-72 Identity = 124/253 (49.01%), Postives = 160/253 (63.24%), Query Frame = 3
Query: 249 GGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDE-ANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFE 1004
GG L+++DPQ DFH GGSLA+ A DAERI+ I +L ID + VTLDSH + IAHP+FW + HP PFT +T +D++ G W P + EH+ L Y +LE+ G F L +WPEHCLIGTPGH V V+ EA+Q W A+ V+Y+ KG + TEHYS AEV V G+E D R +L +L D+VL+CGQASSHCVNF+ RD+A W T +L+ L +L+D MSPVPGFE
Sbjct: 19 GGVGLLLIDPQNDFHPGGSLAIADADKDAERISKLIKENLEKIDHIYVTLDSHQKYHIAHPLFWVNEQKV--HPTPFTTVTKKDVENGKWKPTRAEHRIWGLHYVSELERKGNFALTIWPEHCLIGTPGHCVRGVIQEALQAWEDAKEKAVSYIVKGNNSKTEHYSAIKAEVIVPGEEDLTDLNRTLLDELSRHDKVLICGQASSHCVNFTVRDIADNW---TDSSLK---------KLYVLRDAMSPVPGFE 257
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A067BU91_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BU91_SAPPC) HSP 1 Score: 248 bits (633), Expect = 2.100e-71 Identity = 129/266 (48.50%), Postives = 159/266 (59.77%), Query Frame = 3
Query: 222 AALETEAS--LGGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFEVGG 1013
AA+E +A GG L I+DPQVDFH GGSLA+P A DDAER A FI H+ I +LV+TLDSH RL IAH +FW + G+ PAPFTLITSED+ G W P E + + EYT+ LE GG+FTLC+WPEHC+IGT G ++ V+ A EW+ R +TYVHKG + TEHYS A+V + D ++ L V VCGQA SHCVNF+ RDL W R + +L D SPVPGFE G
Sbjct: 9 AAIEADAKDGHGGLALFIIDPQVDFHPGGSLAIPTANDDAERTAAFIRKHMTAITQLVITLDSHQRLHIAHGVFWKNVDGAS--PAPFTLITSEDVANGKWSPRAPELQAYAYEYTKALEAGGRFTLCIWPEHCIIGTKGQAIVDAVHTAALEWSRVSRRPITYVHKGSNCYTEHYSALRADVELPHDPETSLNVGLIDALKTAGVVAVCGQALSHCVNFTVRDLVEHWPAG------------RASDIAILTDCTSPVPGFEASG 260
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A662YD27_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YD27_9STRA) HSP 1 Score: 247 bits (630), Expect = 3.250e-71 Identity = 121/266 (45.49%), Postives = 161/266 (60.53%), Query Frame = 3
Query: 219 SAALETEASLGGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFEVGGQ 1016
+A L GG L+++D QVDFH GGSLA+P A +DA RI FI+ H + ++V+TLDSH R IAH +FW + +G PAPFTLIT+E ++ G W P KE+ L YT+ LE GKFTLC+WPEHCL+G+PGH++ P V A EW + YV KG + TEHYS AE + D A ++++ L D+V+VCG+A SHCVN++ RDL W + R+G LV+L D SPVPGFE G+
Sbjct: 7 AAKLAGAIPTGGLCLLVIDQQVDFHPGGSLAIPTANEDAARITSFISKHAAKLQQIVLTLDSHQRYHIAHGIFWENAAGES--PAPFTLITAESVETGVWKPRNPSLKEYVLAYTKSLEASGKFTLCIWPEHCLVGSPGHNIVPNVLAAALEWTKQSLRPIQYVMKGSNSFTEHYSALKAEFELPYDPATSLNQSLIDSLKLADKVIVCGEAISHCVNYTVRDLVDGWPK------------ERVGDLVILTDCASPVPGFEEAGE 258
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: W2Q9Q4_PHYPN (Isochorismatase domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2Q9Q4_PHYPN) HSP 1 Score: 246 bits (627), Expect = 1.040e-70 Identity = 127/270 (47.04%), Postives = 163/270 (60.37%), Query Frame = 3
Query: 213 DLSAALETEASL--GGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFEVGGQ 1016
+LS A + ++ GG L+++D QVDFH GGSLA+P A +DA RIA FI H + + +LV+TLDSH R IAH +FW + G P PFTLIT+ED+ G W P KE+ L YT LE GKFTLC+WPEHCLIG+PGH++ P V A EW A V Y+ KG + TEHYS AE + D +A++ L D+V+VCG+A SHCVN++ RDLA AW R+ LV+L D SPVPGFE G+
Sbjct: 4 ELSQAAQVAGAIPSGGLCLLVIDQQVDFHPGGSLAIPTANEDAARIAAFIRQHSDKLKQLVLTLDSHQRYHIAHGIFWENEEGKS--PDPFTLITAEDVAAGVWRPRDPSLKEYVLAYTTALEASGKFTLCIWPEHCLIGSPGHNIVPNVLAAAMEWTKASLKPVQYIMKGSNSFTEHYSALKAEFELSYDPTTSLNQALVDTLKLADKVVVCGEAISHCVNYTVRDLADAWPA------------ERIHDLVILTDCASPVPGFEEAGE 259
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A6A3TN12_9STRA (Isochorismatase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN12_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.930e-70 Identity = 123/256 (48.05%), Postives = 155/256 (60.55%), Query Frame = 3
Query: 249 GGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFEVGGQ 1016
GG L+++D QVDFH GGSLA+P A +DA RIA FI H + +LV+TLDSH R IAH +FW + G P PFTLIT++D+ G W P K + L YT LE GKFTLC+WPEHCLIG+PGH++ P V+ A EW V YV KG + TEHYS AE + D A +A++ L D+V+VCG+A SHCVN++ RDL AAW + R LV+L D SPVPGFE G+
Sbjct: 17 GGLCLLVIDQQVDFHPGGSLAIPTANEDAARIAAFITKHARQLSQLVLTLDSHQRYHIAHGVFWENAEGQS--PEPFTLITAKDVAAGVWRPRDASLKSYVLAYTTALEASGKFTLCIWPEHCLIGSPGHNIVPNVHAAALEWTKCSLKPVQYVMKGCNSFTEHYSALKAEFELPYDPATSLNQALVDSLKLADKVVVCGEAVSHCVNYTVRDLVAAWPQ------------HRCKDLVILTDCASPVPGFEKAGE 258
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Match: A0A3M6VUV5_9STRA (Isochorismatase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUV5_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.230e-70 Identity = 123/266 (46.24%), Postives = 159/266 (59.77%), Query Frame = 3
Query: 219 SAALETEASLGGTTLMIVDPQVDFHEGGSLAVPGALDDAERIAHFIANHLNDIDELVVTLDSHHRLDIAHPMFWTDGSGSGSHPAPFTLITSEDIQQGTWVPVQGEHKEHCLEYTRQLEKGGKFTLCVWPEHCLIGTPGHSVHPVVNEAIQEWAVARRTGVTYVHKGQHPLTEHYSCFAAEVPVQGDEANDKGRAVLAKLCARDRVLVCGQASSHCVNFSARDLAAAWKRTTTGALEDEIARRRMGSLVLLKDGMSPVPGFEVGGQ 1016
+AA+ GG L+++D QVDFH GGSLA+P A +DA RIA FI H + +LV+TLDSH R IAH +FW + G P PFTLIT++D+ G W P KE+ L YT LE GKFTLC+WPEHCLIG+PGH++ P V+ A EW V YV KG + TEHYS AE + D ++++ L D+V+VCG+A SHCVN++ RDL AAW + R LV+L D SPVPG+E G+
Sbjct: 13 AAAMAGAIPAGGLCLLVIDQQVDFHPGGSLAIPTANEDAARIATFIQKHSRKLKQLVLTLDSHQRYHIAHGIFWENAEGKS--PKPFTLITAKDVAAGLWKPRDPNLKEYVLAYTSALEASGKFTLCIWPEHCLIGSPGHNIVPNVHAAAMEWTKLSLKPVQYVMKGANSFTEHYSALKAEFELPYDPTTSLNQSLVESLKLADKVVVCGEAISHCVNYTVRDLVAAWPKD------------RRSDLVILTDCSSPVPGYEKAGE 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.103.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.103.2 >prot_P-littoralis_Contig75.103.2 ID=prot_P-littoralis_Contig75.103.2|Name=mRNA_P-littoralis_Contig75.103.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp MEEYSMRRLSDLSAALETEASLGGTTLMIVDPQVDFHEGGSLAVPGALDDback to top mRNA from alignment at P-littoralis_Contig75:339862..345764+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.103.2 ID=mRNA_P-littoralis_Contig75.103.2|Name=mRNA_P-littoralis_Contig75.103.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5903bp|location=Sequence derived from alignment at P-littoralis_Contig75:339862..345764+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:339862..345764+ >mRNA_P-littoralis_Contig75.103.2 ID=mRNA_P-littoralis_Contig75.103.2|Name=mRNA_P-littoralis_Contig75.103.2|organism=Pylaiella littoralis U1_48|type=CDS|length=975bp|location=Sequence derived from alignment at P-littoralis_Contig75:339862..345764+ (Pylaiella littoralis U1_48)back to top |