mRNA_P-littoralis_Contig745.19.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig745.19.1
Unique NamemRNA_P-littoralis_Contig745.19.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig745.19.1 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.470e-16
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 2
Query:  101 MSKSHGVHVESRGGFVRLESQEKGKGALLLHPTAVVPDDGGRCSRFLVYHERW-----------KLKVTPTVAIILLYMLVSMSLTLLDKWLITGWGFNAPLALISLTYLTMHLVSLSIR 427
            M ++ G + + R GF R+ S E+ +G +      +V    GR  +  + H              K++V   + IILLYM VSMSLTLLDKWL+TG GFNAPL LISLTYL MHLVSLS R
Sbjct:    1 MVEARGGYGDRRRGFNRVSSTEEQEGDI---EHVLVSKSSGRARQQALVHANSDDGGVMRCGSRKVQVNLILGIILLYMWVSMSLTLLDKWLMTGMGFNAPLTLISLTYLIMHLVSLSTR 117          
BLAST of mRNA_P-littoralis_Contig745.19.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 4.000e-14
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 2
Query:  260 KLKVTPTVAIILLYMLVSMSLTLLDKWLITGWGFNAPLALISLTYLTMHLVSLSIR 427
            K++V   + I+LLY+ VSMSLTLLDKWL+TG GFNAPL LISLTYL MHLVSLSIR
Sbjct:  270 KVQVNLILGIVLLYIWVSMSLTLLDKWLMTGMGFNAPLTLISLTYLIMHLVSLSIR 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig745.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMM1_9PHAE3.470e-1646.67TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FL66_ECTSI4.000e-1475.00TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig745contigP-littoralis_Contig745:114666..126054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FL66
PFAMsTPT
Model size479
Max annot lvl2759|Eukaryota
KEGG koko:K15280
KEGG TC2.A.7
Hectar predicted targeting categorysignal anchor
Exons3
Evalue2.21e-15
EggNOG OGsCOG0697@1|root,KOG1443@2759|Eukaryota
DescriptionUDP-glucose transmembrane transport
Cds size378
COG categoryEG
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791541.1888392-UTR-P-littoralis_Contig745:114665..1147651680791541.1888392-UTR-P-littoralis_Contig745:114665..114765Pylaiella littoralis U1_48UTRP-littoralis_Contig745 114666..114765 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791541.2032394-CDS-P-littoralis_Contig745:114765..1149331680791541.2032394-CDS-P-littoralis_Contig745:114765..114933Pylaiella littoralis U1_48CDSP-littoralis_Contig745 114766..114933 +
1680791541.218761-CDS-P-littoralis_Contig745:123961..1240431680791541.218761-CDS-P-littoralis_Contig745:123961..124043Pylaiella littoralis U1_48CDSP-littoralis_Contig745 123962..124043 +
1680791541.228275-CDS-P-littoralis_Contig745:125926..1260541680791541.228275-CDS-P-littoralis_Contig745:125926..126054Pylaiella littoralis U1_48CDSP-littoralis_Contig745 125927..126054 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig745.19.1prot_P-littoralis_Contig745.19.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig745 114766..126054 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig745.19.1

>prot_P-littoralis_Contig745.19.1 ID=prot_P-littoralis_Contig745.19.1|Name=mRNA_P-littoralis_Contig745.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=126bp
MSKSHGVHVESRGGFVRLESQEKGKGALLLHPTAVVPDDGGRCSRFLVYH
ERWKLKVTPTVAIILLYMLVSMSLTLLDKWLITGWGFNAPLALISLTYLT
MHLVSLSIRARLRRRRQGEGVGVRVA
back to top

mRNA from alignment at P-littoralis_Contig745:114666..126054+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig745.19.1 ID=mRNA_P-littoralis_Contig745.19.1|Name=mRNA_P-littoralis_Contig745.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11389bp|location=Sequence derived from alignment at P-littoralis_Contig745:114666..126054+ (Pylaiella littoralis U1_48)
TGCGGGATGAGCATCGAGTTAGGGTGCGATCGTTGCGTCGCCACAACACC ACGCTTGCAGGAGCAACGAGGCTCTCCCATTATCCCTAGAATCGATCGGT ATGTCCAAAAGCCATGGTGTTCATGTTGAAAGTCGCGGTGGGTTCGTGCG TCTGGAAAGCCAGGAGAAAGGCAAAGGTGCACTTCTGCTGCACCCAACTG CTGTTGTTCCAGATGATGGCGGCAGATGTTCGCGGTTCTTGGTGTACCAT GAGCGATGGAAGCTGAAGGTGAGGGGTTTGAGGGCACCTGGCTTCTGTTC GGGAGGGAGGGAGCGAGTGCTTAGCGACGCGTGCGAAGCTTGGATTGTTT GTGCTTGATCACACAAGAAGCAGCAGCAGCAGCAGCAAGCAGCAGCAGTC CTGTCTGTGACAGGAGCACGATACAGCAGTACTGTAGCAGTCAGCAGTCA ATTTGAACAGCAGTACAAGCACAGGGTGCAGTACTAGGACAGCTATCATT TGATGTGTCACTGCTGTGTCACTCCAGTATTCGTTCGAACTAAGGAATTT GTAGGGTTGGGTACTGGCGCTGAAATGGGCAGTCACCAGAAAGCGGTGTG CCGCCGGGTTTCCATGCCACCCAGCGGTACACCAAAATGCACCTTGGCAT TTGAGCCCCGTCCGCGTCGCTGATTGGCCAATGAAGCCCTAACTGTTCCG AGGCTTCCCAGGTCGATTCGTACCGGTTTTCGGAATGGGGTGTGGTGTAC GGACTTTTGGCGCGGATCTGGCGGGGCACAGCACCGCCAGCGGAAAATTT CCGAGACCGTTCGCGCCGAAAACAATTTGGAAGAACTTTCCAGAAATTTC GAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTGTTGTTG TTGTTGTTGATTCTCACATTAGCTCACTACCGCCGCAGTCTAGCCCGTGG TCACAAACCAGGCACATATCGTGCTAGGAGGAAAAAAATAAAAAAATAAA ATATATGGACTATGATCACCCACAGTCAGATCAGACGTGGTACCGTTGGG GTACCATCTGTGGTGGCCAGGATACCAAACAAATACAGAAAAAATAATAA CAGGCTCGAAAGAAAAACAATAATTGGAAACAGTCCGGCAAACAAAAAAT AACCAAGACAAACCTCAACCATAACCATATACTTCGAAGTACTTCGTGCA TCGAACCAGGGCCCAGGGCCATGACAGACCAAGGCAGACGCAAACCAGGG CGATGGCCCAGTAACTATATGATCAACAGACGAAAGACAAAAAATAAAAT AAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTGAGGGAGTGCATTCG TAGACAAACATAACAAACAGGCCGCCGCCAAACAAAGAGGAAGCAGGGGA ACGAAAAGGGAAAAGAAGATCGGAAGTACCGGAAGTCGGGGGGGGGGGGG GGAGGTGATAAAAATAAATGAAAGGCATGCAATCAATCGCAAACGTGTCT TGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTCATGC CTCCTGCTACTGGCACCACCGTACCCAGTTGTTTCTGCCCCACATCTTTG GCAGCAGCTACACCACCACTCCGCCCTACAGGTTTTCCACTCCGGCCACC CCGTAGCTTGGCATTGGACTGCTTCTTCTTGTGCTGTGCAACTCCAACCC CACTACCCCGCTGCCCTTGTGCCCCCCGTACTCCTCCTCTCGTTTACCCC CGCCATCCGTTCTCCCTCTTTTAGTCAAGGCCTGCCTCTCAGCCGCGTCC TCTCTCTTTTCCGTCGACGTGTCTCTGATAGGTCTCCTCTTTCTTGAGCC ACTCGTCCGTGAACCGCCGCGCACCCTCGTCGACCCTGTCGTACCACTCG TCAGCTCTCTTGGCACTTGCCTCCCACCCCTCCTTTTTGTCGACCACGAT GTCGAACGCTTCGAGGTCCTCCCGCATTCGCCTCAGCCAGTCAAACTCTT GCCCCCCAGATACCTTGCTCCCCCCTGCAATTCTCCCAAGAGAGCAATTT TCGGGAGTCTCTCGTCTCTCATGCGCGCAACGAATCCTGCGAAGCACAGT CGCCGCTTGCGCAGTGTGGCCTCAACGCTCTCGTTGCAACCCGCGGTGAT CAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTGTTCTCTCCCTCTGTTTCC ATCCGATGCAGCGAAGGAGGAAGAAGTGGTGGGCTGACCGAAGCTTGCGG TACTCCGCTGGCTTCAGATTCCATGTGACACACCCGTAGAGTAGGGTCTC CACGACTTCAGCTTGGAGGAGTCGTACTTTTAGTCGAAGAGGGGCCCCGG GCGGTCGTACATTGCCTGGCTGTTGCACCGGAAGCAGGCGTGCGCTCGCT GCACTCGGTGGTTAATCTCGCCCTCAATGCTGCCGTCCTCACAAATCTTA CCCCCGAGGTAGACAAAGTCTTTCTTCTGCTTGAAGACCATCCCGGCAGC GTCGATCGTGAACGAGCACGCCTCCATCCCTTTCGCGAGCATACACATGG TCTCCGTCTTGGGTTCTGACACCAACAGCCCAAACCGCCCGGCCACACGT ACGATGATCGACATCATCTTCTCAAGGCTCCCAGGTGATTGAGATACAAT ACAGGCGTCGTCGGCGTAGAGCATACTCCAGATGGACTTCACTGCCTCCA CCAGTCGGGCGTTCCTCCCCTTCCCCTTCGTCACCTTCCTCTTGACCTTG GCCATGTCCGCCATCACCTCCGCATCCTTGCTGATCTCGGCAAAGGCCAC CATGAGCATCGCAGCAAAGAAAAGGTTGAACAGCAGGGGTGCCAGATTGC ATCCCTGTCGGAGTCCCTGCCCCACATCAAACCAGTCGGAGCACCTCCCG TCGTCCATCCGTACGCATGCTCTCATTCCGTCGTGGAATTGGCGAATGAC CGCAAGCATCTTGGGGGGCACTCCGAGCCGTTTGATCACCGACCACAGTA GTTCCCGGTCTACGGAGTCGTAGGCTTTCGTGAGGTCAATGAAGCAGGCG TACAGTGGGGTTGACTTCTTCCGTGCAAGCTCGTGTAGGCGTCGAACCAC GAACATCATGTCAACCGTTGAGCGGTTTGGTCGGAATCCGCTCTGTTCCT CCGGCAGGATGCCCTCTCTTTCGCAGTAATCGCTTAGCCGGGTGGCGACC AGCTTCAAGAGTACCTTGCCAGCGTGGGCCACAAGGGAGATGCCTCGGTA ATTGCCGCATTCCGTCTTGTCCTTCTTCTTGTGCAGCACCTTGATCGAAG CATCTTTCCACTGCTGTGGCACCCTTCCCGATTGCCAGATGTTGATGATG ATACTATAGAACTGCCGTAGGAGGGCTTGGTCTCCGTCAAGGAAGAGCTT GATAAGCTCCGCCGGTAGTTCGTCCGGGCCCACAGCTTTCCTGTTGGCCA TTCCCCGGATTGCTTCCTCAACCTCAAACAGCGAAGGGACGTCATCAAGC GGTACGCACTGAGGCCAGGGCTCGATCTTGTCCACCACTCTCGGATCCAG GGTCGGTGACTTGGTGTTGAGCAGAGCATGGAACCACCTGGCCCACCGCT CGAGGATAAGTGCGGGGTCCCGAAGAAGATTTCCATCCTCGTCCTTGATG TTCTGTGAGGTGAAGGCCCTCTTCCCCTCCACATCCAATCCCTTCATGTG CTTGTAGAAACCGGCCTGGTCCCCTTCGCGGCTTTTCTTCTCGAGCTGAC TCACAAATCCATCGAAGAACTCATTCACAGCACTGGCTCTAAGTCGATCA AGGTGCTTCCCGGCCGCCTTGAGGTTGCTCCTGAGGGTGGAATCTTTCGG CGCACCGCGGAGCTGCTTCCGGGCGTCCTCCCTTTTAAGCCATGCCACGT GGATCTCCTGCTGCACTTCCTCACTGGCGCACCAGCCACTTGGCAATCTC TTGCCCTTGGCCCGGGGGGCAACGTCAGCGGCGGTGGACATCACAGCAGT TGTCAAGGCCGGCGCGAGCTCATCCACATTCGCACCTTCCATGATGGGGG AAATTCTGTCTCTAAAGTCTTTCCGAAGTTGGGGGTCCGCCATCAACCGT TGTAGATCGATGCTAGCGGAGGTACTGCTGCTGCTACCCCTCACACGTCG ATTCGGTGCCACTCGGCCAAGCAAGCGGATGTTGGCAAGGACGAGGTTGT GGTCGGAATCCTTACGATCGATACGCCGTACGGAGACGTTGCGCACCAAC CGAAGGTCTACCTGGCGGGTCAGGATGTAATCGAGCCGATATTCTCCCTT CCCGCGGTTGAAGGTTTTGAACGAGTGTGATATCCCGCGTTTGGGTGTGC AGAAAAAGGTGTCCAGGATGGAAAGCCTACAGCTTGCTGCAAATTCCACC AGTCTCCGCCCGTTATCGTTCCGCTTGTCACGCCCGTACATGCCCATCAC CTTATCAGGGGTACTCTCATCCTCTCTTCTACCAGTTCGAGCGTTCGCAT CCATCATAACCACGACGTGTTCCCTGCTAGGTACTGCATTGACTGTCTCT CTCACTGATAGCCAGAATCCATCTTTCTCACTAGTCCCATCCGTCTCGGT GGGTGCATAGGCAACCACAAAGGATACACAGTTCGAGCCAGTGAGTTGCA GGCGTACCTTCATCAGTCTTGCGCTAATGCACTCCACCGTCATACCTCCT TTGTCCATCCCATCCACGATGGACTGCTTGATAGCCAGCCCGACCCCGTG CACTCCTTTCTTCTCGGTGGTCCCAGCAAGTGCTCCACTCCAGATCACAA CATATCCCGCGTGTGTGAAGGCACCATCATTAGCACGCCGGGTTTCCTGG AGGCCAACCACATCGCAATCGGAGCTACCACAGAGCTGTAGCACGGTGTT GGAGTTGTGGCCGATACCGTTGGCGCCCTTGTAAGCAAGGGTGCGGACGT TGAAGGAGCCCACTACCAGTTCGCCTGCACGTGCCTTTGTTCTCATCTCT GCCCATCTCTTTCGGTCAGCCTTGCGTACAGGTCGGTTTCGCTTCCGTTT CTTTCGAGCTGCAATTTTCCTCCGTTCCATCCATCTTTGCCAAGCTCGGT ACTCGTCTACGTTCAGGCGGGCTGGGGACGACACTCCCGGCCAGCGTCGA CGTGAAGGTCGACGAGGGTGCTTACTAACGTGGTGCCTCCTAGTCTCTCT GCTCCTCAGGCTACGAGTTCCACGATTTCCGCGGTGATGTGTCGACACAG CTGCCGCAGACAGTTTGACTGTCGCGGAGACCAGACCATAGTTGGTCCGG ACTGCTGTAGTGCCATTCGTCACCTCCATCACCTACCCAGCCTCGGCGTG CGCCGAGTAGGGTCTGACCACACCACTCCCACACTACCCTGTCTACTTTG GTAGAGCCCGGTGTGTCCAAGAGGGACCCACTAGGTTGGGTGACCCCGGC CGGGGAGCAGCCGAGGGAGGAAAGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTTTCATCCCTTTCATTGGACGCCACTCTACACCTTCGG GGTATGTAGACGCTCCAACCGGGGTCACACAGAGGGAAGTCAACACAGGA TTTTTTTTTTTTCCTCCACTTCCCTCTGCGGTGCTTGCCTTTTTGGTTGA GCTTTTATCGCGAGAAAGGGGGCAGCAATCCCCTTCCCTCGTCGATGGTA CGATCGAATTATTGTTTACTTACGAATTGATCGATTTCCACTTTCACGCG CAATGTGAGAAAAAAACCCCAGGTGGTGTTACCGGTACTGCACTGGGATC CGAACTCACGCGTGAAAGTCAGAAGGTTGCGTGGGTAACCAACTGAACCA CCGGGGCGACCGGCTCTAGAAGTGATGAGAAAATTCACTCCACAACCAAC GCAAGTCACGTCTTGCCTCCGTTATGTCACGGACATATCAATTCCGATCT TAACGGCACGCCGTCTGCCCAGCAGACAGACAGATATATACCTCTCCGTC CGTTCGGCCAATGGTTTATAAAAGAGATGGAGCTGCACGTTGCGCACATT GCACAGCCATCGTGCACAGATGGCGCGGCTCTCTCGATCTCTCCATGGCT GCTTTGAATGCTGACAGTCCTGCAGGCGATACCTTTCACTCGCCCTGAGC TTGCTTGGTCCACCGAATGTGGGCCGTGCAGCCCCGCTTCGATCGATCAC AACGGTACATCGCCTTTCTTTGCCGGCCACAATGGAGTGCCCTCGGCAAC GAAATATCGCTCGCCGCTCGCGTAGACACTCATTGTCTTTCGGCGTGATG AAGCCTACACCTAGGATGTGGGGTGGTTGGTTTGTCGCCATCGCGACGTG GGCAGAGGGGTGTGACGTGTTGGGTGTGTGCGGTCACAGCTTTGATGCCG GCAGGAGGACTGTCAGCCTTTCAAGCAGCATGGAGAGATTGAGGGAACCG TGCCATCTGTGCACAACGATAGTCGCGCAATGCGTGCAACGTGCAGCTCC ATCTCTTGTAAACCATTAGCCGGACTGACGGAGAGGTCTATCTGCCTGCT GTGCAGATAGCGTGCCGAGAAGATCTGGACTGATGTGTCCGTGACATGAC GGAGACATGGCGTGGCTGCATTGGTTATGCGATGAGTTTTCTCGTCTGTT CAGGAAATTGCTTCAAACCAACAAAGCGACGCCGTTGTAATAATTTTTAT ATGAATAATCGCACAGGTGATAACTACCGGTATAAAATTAACATGAAACT AAAAACCAATTCGTACAAAAACAAACAACAATAACGGCACCACACAAAAA CCGTACATACTCACCACATAATGCATCGTGTGTCACACAAGATGACTCCC AAATTGTCTTGTTGATGTATTTTCTCCCTGTGTTCGTTGCTAATCTCGCT GGATCCTCGTCTAGACAGAGGCGAACACATCGATGTCTCTGTAAGAAAAA TTATAAAAAAAAGTTGTTTTCGGCGCGTACGGTCTCAAGAATATTGCGTT GGGGGTGGCTATAGCCCCGCCAGAACGGCGCCATAAGTCGGTACATCCCC ATGTGAAAAAACGGTACGGATCGACCTGGAAAGCCCCGATCGATCTGGGT TCCTGTACAGGACTTCATCGGCCAGTCAGCGACGCGAACGGGGCTCAAAT GCCAAGGGTGTATTTCGGTGTACCGCGTGGTGGCGGAACCCCGGCGGTAT ACCACTTTTTCTGGCGTCTGCCCCCAAAACGTGACTCATCCTGTGTGACC CCGGCTGATACGTCAAACGTGTACCGAAACGTAATTAGCTAGTGTATGTA GACCGGCGACAAAATAGATGCGTGCATACACACACACGATGGAAAGCAGT TGTAGCTTGCTTTCGATTTTTCGTAGATTTTCTAGCGTGGTGACACACCA TCTGAAAACGCGTGCGATGCCGACTACCTCGAGAACTTGGCGCAACATGC TGCTCAATCAGAAATTGCTTCCGAAATGTTTTTGACTAAAAATTCTTCGG CACATGTCCTCATGTTCGGAAACGAATTCGCTTGCATACCGGCAAGGCAT GAAGAAGTTTAAAAGGTTTTGCAGCCCGACGCCATCGTGATATTCATGCC GGCAATCTAGGGCATGAAAAGAAACAACTTTCACACAATAACGTCAAAGG ATACGTATCAATTTTCGAACTGAAAAGGTTTGCGATAGATGCGGAAGCAA AAAAGAAAATACGACAGGCTGGTTCACGGTAGAAGCAGGAAATTTACTCC CCGGGATTTTCTCACGCGGTTTCTACGAGTTAGACCCTGAAATTTTGCAC ACATCACAAAAAAAAAGGCCAATTCGTCGAAAGTTCCGCAGTTCAACTGG GACCCCAGATATCTGGTGAAAGAAAAAAAAAAAAAGGCCAATTCATCGAA AGTTGCTCAGTGACCCACAGTACATGTGTGCTAAGTTTCAGGGTCTAACT CGAAAAAACCGCGTGAGAAAACCCAGTTGAGTAAGGTGTACTGCTACATA CCAGGTATTCCCTAATTACATGAATTTATAATCAAATCGGCCATTTTGGG TTTCGTAGCCACACTATGATACGTCAGTTTTTGAGGAATTTCGAAAAAAA AAATCGTGAACGCCTTCCTTAAAAACCCAGAGAGACGATACATGTTCGAA AAAAGTATGTATCTCGAATCTGTTTTATATTTTGGGGGGTGTTGTATCAC GTCATTCCGTGAAAATGACACATTTTTGCCCCTAGCGCCAACATGAGAGC TTGAAACGAAAATCCAAGAATGTCACGGTCTTGTACTGTTGATGGCGGTC AGTTTGGTACCAAAGTTGTGCAGATTGGGTCATTATGGCGTTCGGGATTA TATGGGGACGAAATCTGGGGATTTCACCGTGAACCAGCTGTAGCCCGAAC CACGAAAATCGGAATTCGAAAATCGAAAAGCAGACTCGATGGCAACAGAG TGGGTCAGCCTCGCGGGAAGGGGGGTTGATCGGAGAGCACAGAGGGAAAC ACATTCTATGTGTGTTGTGTGTGCCTGCCTTTCTCTCTCCTCTCCCTTTC TATCTCTCTCTCTCTCTCTCTGAACAGACGGCATGATAGCGTGGTCGGTG TGGTCTCCCACGTATCCTCGACGCCAATGTTAACCTTTCGTAACAGGTTG AGCGCGTCAGCCGGGGGGGGGGGTCACAACAGACAGGAACGTCAACACAG GCGTCCTGTTTTTGTTGTTCTCTGGTAGCCTTCTCCGGTGCTAGCGTCAT TTTTAGTGTGGAAAAAATATTCCACGTGAAGGAATTGCAGCCCCCCTTTT CAGTTTAGGTTGCCTTTCATGATTGGATTTGCCGCTTCCGGCCACGCACT CACTCACTCCTTCACCCACCAAGTCATTTACTCACTCACTCACTCATTTA CTCACTCACTCACTCACTCACTTATCACCAACCCACTCACTCACTCACTC ACTCACTCACTTACTCACACATTCACTAATTCACTCACTCTCTCACTCAC TTACTCACTCACTCACTCACTTATCACCAACCCACTCACTCACTCACTCA GTCACTCACTCAGTCACTTACTCACTCAGTCACTAAACTTTCCTTCACCC ACCAAGTCATTTACTCACTCACTTACTCACTCACTCACTCACTCACTCAC TCACTCACTCACTCACTCACTCACTCACTTACTCACACATTCACTAATTC ACTCACTGCTGCTGCTGCTTCTGCTGCTACTGCTGCCGTGGATACATTTG CGCCTCGCCTTTCTCCGCTGTTATACGGTATCCCCTGCATCCCCAGGTGA CTCCAACGGTGGCCATCATCCTGCTCTACATGCTGGTGTCGATGTCTCTC ACGCTCCTTGACAAGTGGCTCATCACAGGTGAGGACTCTCAATGCTGCGC ACCCTCTCACTCCTGTGCAGTAAAGTATCAAGCACTTCGTACTTTCATTT TTGGTCACACCAGCTTTACCTCCACGCCTCTTGTTCTTACTCCTTATTAT TTTTTTCTTCGAAATATTGTTATTTATTTTCATGTGTTTGGTAATCATGT TTTCATGTCTTCGAGTACGAAGCGTTCATTTTTTTATTACTGTTTGCGCA TTTTTCTCGCATTTTGTTCTCCACTTGCATGGGTTTATTAAATTTTCCAA GACGTTGTTGGGGCTAATGACGCAGGGGAGCTGCAACGGTACATTATCTG ATGAGTAATGGAATCACTGGTAGATGTATGTTATTCTTTGTGTTCGTTGC AATACATATTCCAGACCCTCGTCTGGAAAAAGGCGAACACATTGATGTGT TCAATTGAGTCTTGCCAGAAATGAAGCATTTATTCGCATTGGTTTTCCTT TTTTGCCACCAGCGCCTCATTTGGCTTCTATGACGAGTACGTATATGCGA CTGCCGCTGCGGGTTTTGGTTTTGTTCCGATGAGCTTTCACAATGGAAGC TAATTAGAACACGTCGGCCATTTCAGCAGGTGATGGTTCAAGTGTTCCAT CCCAGTCCAATTTCAACGCAATCCAATATAAACAAATCTGTATGCATACT AAAAAGAACCAAAGAGCCAAAGCTTACAATCCAACACATTTCATAAATTT CAATTCAACACATGAAACCAAACGCTTGACATCCACGTCGGCCCCGCCTA GTCTCTTGGTTTGCACCGCGACCCTGGAAACGCCAAGCCATACAGCACAC AGCATACAGGCAGTACCAAGCCTGTTTTATGTGATTTCGTTTGTTTCTCA CATTATTGCTCTCCTCCAACAACCCAGCCCGAGGTCCCAAGCGCTGCCGC CGCTGCTGCAAGACACGTTGACGTGCAAAGTCATTCAACAAGACTTCACA GACAGTATACTGTACATGTTTTATCCTTCTCTACTGAACGGTCATTGTTT TTCCCTTCCCTACGATCACATCATACCCTTGCACCGCCGTACGCACGGCG CGCACACCCGGCGTATCGCCCGGTCCATCCGTCGGTCCCCCGCCCCTGCG CTCCATGGTGTTGTTGTTGTTGTTGTTGATTCTCACATTAGAGCGCTACC ACCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGG AAAATAAAAAACAAAAGAAAACGATCGATGGTCGCCCAATCGAAATCAGA TACAGTATATGGGGTGCCGTTGGGGTACAGTACCATCTGTGGTGGCCAAA CGTACAAAAAGCACAGAGGAAACAGGCTCGAAAGCAAAAAAACAAAATTG TCAACAGGACAAAATCAAGACAAACCTTAACCAGGGAGTGTGTGTGCGTT TTCTTCCCAAATATTCTGGGCACCAGTCTACCGGTACACCTTTCGGTATG AAGTGGGTGCACCAGCCACCAGCCGAGATTGGGTCACACAGAAGGGAGGT ACACACAGGATTTTTTTTTGATACCTGCGGAATATCATATATACAGTACG ATCAACCGTCAGTCGATCAATCGCACCGTCGTAAAAAGGAACGAACATCC GTGACGGGCGGGCGTCGGAGACTGGTTCTTAAATTCCTTGCGGTTCGCGC GTAAAAAACTCTGCAATACGTGGTCACATCTGCTGACTACTGTACGACCA ACCAACCAACCAACCAACCAACCAGCCAACCAAGCAACCAACCAACCAGC CAAGCAACCAATCAACCAGTCGATGAACTGTTGCTACCCCAAGCTTTGTC GTGGCTATGACATTACCCTCAGCCTTACGATCACCGCTTGCGTCGCGTTT ACATGCACCAGGTTGGGGCTTCAACGCTCCCCTCGCGCTGATCTCGCTCA CCTACTTGACCATGCACCTCGTGAGCCTGTCGATACGGGCCCGCCTGAGG CGACGGCGGCAGGGGGAGGGGGTCGGGGTGCGGGTGGCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig745:114666..126054+

>mRNA_P-littoralis_Contig745.19.1 ID=mRNA_P-littoralis_Contig745.19.1|Name=mRNA_P-littoralis_Contig745.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=378bp|location=Sequence derived from alignment at P-littoralis_Contig745:114666..126054+ (Pylaiella littoralis U1_48)
ATGTCCAAAAGCCATGGTGTTCATGTTGAAAGTCGCGGTGGGTTCGTGCG
TCTGGAAAGCCAGGAGAAAGGCAAAGGTGCACTTCTGCTGCACCCAACTG
CTGTTGTTCCAGATGATGGCGGCAGATGTTCGCGGTTCTTGGTGTACCAT
GAGCGATGGAAGCTGAAGGTGACTCCAACGGTGGCCATCATCCTGCTCTA
CATGCTGGTGTCGATGTCTCTCACGCTCCTTGACAAGTGGCTCATCACAG
GTTGGGGCTTCAACGCTCCCCTCGCGCTGATCTCGCTCACCTACTTGACC
ATGCACCTCGTGAGCCTGTCGATACGGGCCCGCCTGAGGCGACGGCGGCA
GGGGGAGGGGGTCGGGGTGCGGGTGGCA
back to top