prot_P-littoralis_Contig745.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig745.19.1
Unique Nameprot_P-littoralis_Contig745.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length126
Homology
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BLAST of mRNA_P-littoralis_Contig745.19.1 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 8.530e-17
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 0 
Query:    1 MSKSHGVHVESRGGFVRLESQEKGKGALLLHPTAVVPDDGGRCSRFLVYHERW-----------KLKVTPTVAIILLYMLVSMSLTLLDKWLITGWGFNAPLALISLTYLTMHLVSLSIR 109
            M ++ G + + R GF R+ S E+ +G +      +V    GR  +  + H              K++V   + IILLYM VSMSLTLLDKWL+TG GFNAPL LISLTYL MHLVSLS R
Sbjct:    1 MVEARGGYGDRRRGFNRVSSTEEQEGDI---EHVLVSKSSGRARQQALVHANSDDGGVMRCGSRKVQVNLILGIILLYMWVSMSLTLLDKWLMTGMGFNAPLTLISLTYLIMHLVSLSTR 117
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BLAST of mRNA_P-littoralis_Contig745.19.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.350e-14
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0 
Query:   54 KLKVTPTVAIILLYMLVSMSLTLLDKWLITGWGFNAPLALISLTYLTMHLVSLSIR 109
            K++V   + I+LLY+ VSMSLTLLDKWL+TG GFNAPL LISLTYL MHLVSLSIR
Sbjct:  270 KVQVNLILGIVLLYIWVSMSLTLLDKWLMTGMGFNAPLTLISLTYLIMHLVSLSIR 325
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig745.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMM1_9PHAE8.530e-1746.67TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FL66_ECTSI1.350e-1475.00TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig745contigP-littoralis_Contig745:114766..126054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig745.19.1mRNA_P-littoralis_Contig745.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig745 114666..126054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig745.19.1 ID=prot_P-littoralis_Contig745.19.1|Name=mRNA_P-littoralis_Contig745.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=126bp
MSKSHGVHVESRGGFVRLESQEKGKGALLLHPTAVVPDDGGRCSRFLVYH
ERWKLKVTPTVAIILLYMLVSMSLTLLDKWLITGWGFNAPLALISLTYLT
MHLVSLSIRARLRRRRQGEGVGVRVA
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