mRNA_P-littoralis_Contig743.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 244 bits (624), Expect = 3.350e-67 Identity = 177/427 (41.45%), Postives = 233/427 (54.57%), Query Frame = 3
Query: 108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTAL-LRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTS-IYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQ--KEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKLIW----RRAGRLGVLEAALARHSGK 1364
N+LH A +GSA+ A+L+ G + ID+ + G TPL+ A H + ++L+ KGAN SI D+ G+TAL A A+ ++L KA GA DL+A + ++ ++ A D + P G T L AA EG + V+ ELLR ANPLL + P +PLD+AA+ H +VV ELIQ+LG++GC S GA+AL A H+ I+A+LT+AGVVDTG AL AA G+EA+VKFLLR KEG +Y+ + T PL+ C C S APR+ R+LVDAG DTTS V++ G VF+DTP LRK G + RLEAI RLLL+V+AVHA SWLWP G A PP LKL+ RR R L A L R+S K
Sbjct: 107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKA-GA-DLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYT-PLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKG-GVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRAT---ETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 226 bits (577), Expect = 1.560e-61 Identity = 171/429 (39.86%), Postives = 227/429 (52.91%), Query Frame = 3
Query: 108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEG-DTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEG---QQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGD------ASRSKMPPSGHLKLIWRRAGRLGVLEAALARHSGK 1364
N L AA GS K LL+ G +ID+G+ G TPL+ A+ G +P +VR+LL+KGA + D D + H T + AA+ G + V L+ AG+ ++ R G TPL+ AA G++ V LL AKA+PLL + K LPLDVAA+ H EVV+ELI+Q+G+DGCGG SGG NAL A + I+A+LTDAGVVDTG+AL AA G EA +KFLL Q G +T +Y+ TS L+ I C PRV +LLV+AG DTTS V + G + F TP L + L GG + + +++++LE IRRLLL+ EAVHA SWLWP HA A+ + P L + R GR G+L AAL R+S K
Sbjct: 16 NPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNH-CTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTS-LLDGIQRC---RPRVVQLLVEAGADTTSPVLICNQPGEDD-FHITPLGLTMCLL------GGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLL-AALLRYSSK 431
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 221 bits (564), Expect = 4.620e-60 Identity = 177/437 (40.50%), Postives = 222/437 (50.80%), Query Frame = 3
Query: 108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGG-TPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPAL-PLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVR----TSPLITCIFNCC----SGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASR------SKMPPSGH-LKLIWRRAGRLGVLEAALARHSGKP 1367
N LH AA GS + LL+ G +I++G TPLI AAS H V+ ILL KGAN SIV + G TAL VDIR PV G TPLFRA EG L ELLRA ANPL+ + LP L PLD AAR ++ V+ ELIQ++G++GCGG+S G ALL AG + +A+LT AGVVDTG AL +A G EA+VK+LL+ + Y A + VR T+PL++ I+ C S PRVARLLV+AG DTT+ +R T + G +F TP L + L+ G + Q+ RLE IRRLLLQVEAVHA SWLWP G +A+ + P G L ++ RRA R GV+ AL RH KP
Sbjct: 2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTAL--HVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAP----LPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQN------HAKHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGV-VLFSCTPLKLTVHILQDKKVDGTYISK-QRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 193 bits (491), Expect = 4.770e-50 Identity = 156/430 (36.28%), Postives = 206/430 (47.91%), Query Frame = 3
Query: 108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETC-HKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDD----TPKNLVIDTLR-KLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKLIW----RRAGRLGVLEAALARHSGKP 1367
N LH AA GS + +L+ G +ID+G+ G T L+ A+ G + +V ++L+KGA SI +EA T H ++ R G TPL+ AA +G++ LL AKA+PLL LPLD AA H EVV+ELI+Q+G+DGCGG SGG AL A ++ I+ +LT+AGVVDTG+AL AA G E +KFLL Q T ++ +PL+ I + PRV RLLV+AG DTTS V + RN + D TP L ++ +R K+ G G +Q +LEAIRRLLL+VEAVHA SWLWP I AA + S + L RRA V AAL R+S KP
Sbjct: 16 NRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAV-----RNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 193 bits (491), Expect = 5.740e-50 Identity = 163/436 (37.39%), Postives = 208/436 (47.71%), Query Frame = 3
Query: 108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIF----NCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLW----PKVICPAGHAAGDASRSKMPPSGHLK----LIWRRAGRLGVLEAALARHS----GKP 1367
N+LH AAR GS A+LS G I+ID GD +G TPL+ A +HP VV ILL KGA+ S +++ G TAL SA G+ V RAKANPLL + + LPLD AA+ + VV EL+Q+ G+ GCGG +GG AL A HM ++ LT AGVVDTG+AL A S G+ VKFLL+Q+ G + +YV+ +PLI I CS P+V RLLVDAG DTTS VR T G V TP +L + LR + A + RLE IRRLLL+VEAVHATSWLW P+V PAG A + S + L+ ++ RRA G + A+L R++ GKP
Sbjct: 16 NKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGY--VVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQ--HLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCS--PKVVRLLVDAGADTTSIVRFTIQPGTLPVVC-TPLSLATEALR-IKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKLDGKP 443
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI) HSP 1 Score: 170 bits (431), Expect = 3.850e-43 Identity = 129/324 (39.81%), Postives = 174/324 (53.70%), Query Frame = 3
Query: 414 TSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAG---DASRSKMPPSGHLKLIWRRAGRLGVLE---AALARHSGKP 1367
T + +AA G + + L++AGA ++ R G TPLF AA EG++ V LL AK +PLL T + +LPLDVAA H+EVV+ELI+Q+G+ GCGG SGG AL A H+ ++ +LT+AGVVDTG+A + ++ + +G+ +G + V R I C C PRV RLLV+AG DTTS V + DG + TP L T+ LH G +Q + LEAI RLLL+VEA+HA SWLW IC ++ D + SK L L R+ R E AAL R+S KP
Sbjct: 19 TPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGRRIWR--RGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDA-IACWHQRCR--PRVVRLLVEAGADTTSTVPI---DGLPGTDNITPMGL---TMLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 172 bits (436), Expect = 3.900e-43 Identity = 145/423 (34.28%), Postives = 198/423 (46.81%), Query Frame = 3
Query: 105 RNELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTS-IYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKL--IWRRAGRLGVLEAALARHSGK 1364
+NELHFAA GS + A+LS GLINI++GDP G TPL+ A+ + +VRIL+ +GAN IV + G+TA A GA DLEA T + ++LAADKGH ++ R T AKA+PLL + + +PLD AA VV E + QLG+DGCGG S GA+AL HA + +A+L +AGVVDTG+AL A + E ++KFLLRQ++ +YV A +PL+ CS + D G LV L + G E +Q +L A+ RLLL+VEAVHA SWLW H A R+K+ PS ++ + + R L +A+ R+S K
Sbjct: 14 KNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNA-GA-DLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDR-FVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLL------CS--------IEDEG-------------------------LVDHYLGENRVIGRDITE-EQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTAEVTKRTKVTPSPRSRMFPVLGLSTRRNALLSAVLRYSSK 393
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 175 bits (443), Expect = 4.810e-43 Identity = 154/422 (36.49%), Postives = 196/422 (46.45%), Query Frame = 3
Query: 108 NELHFAARIGSAKHVVALLS-RGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEP-TEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDS-YVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKLIWRRAGRLGVLEAALARHSGK 1364
NELH AA GSA+ +ALLS R I++++GD AG TPL+ A + HP VVRILL+ GAN SI+D+ G AL A+PLL P T + LPLDVA VV EL+Q+LG++ CGGES G +AL A H+GI+AML AGVVD G AL AAA++G EA+VKFLLRQ EG + S YV F T PL+ I C + R+ RLLVDAG DTT+A RLT G+ A+ T + L + A G G++ L+A RLLLQVEA HA SW+WP R++ P L + R G L A++R+S K
Sbjct: 16 NELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLT-PLLENI-TCGHCSARIVRLLVDAGADTTAAYRLTGKKGQ-AMAATTHLTAMGCLLLEKKAKGD---TGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEK 429
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.600e-42 Identity = 146/371 (39.35%), Postives = 185/371 (49.87%), Query Frame = 3
Query: 105 RNELHFAARIGSAKHVVALL-SRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTAL-LRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGD--SYVTPAGIFVRTSPLITCIFNCCSG---APRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEA 1196
+N+LH AA GS + VVALL SR I ID G G TPL+ AA VVRILL+KGAN S+V E G+TAL + GH VT LAA+ G EV +V RAKANPLL K P+ + +PLD AA EVV ELI+Q+ + GCGG SGG AL A ++ ++++L DAGV+DTG AL AA + +EA VK LL+Q+ G + G+ YV V +PL+ I +G +PRV RLLVDAG DT SAV L T G+ TP + +L + GG A E + +L AI RL QVEA
Sbjct: 16 QNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXX--XXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSG-VTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIG-RSVTPIDFATCSLHENMDGGKTAME-KHVHKLRAIHRLFSQVEA 381
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5JFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP0_9PHAE) HSP 1 Score: 165 bits (418), Expect = 4.730e-40 Identity = 148/434 (34.10%), Postives = 205/434 (47.24%), Query Frame = 3
Query: 114 LHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALL----RSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGG-TPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAP---RVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRK----LHAGGGG-AGEGQQRSRLEAIRRLLLQVEAVHATSWLWPK----VICPAGHAAGDASRSKMPPSGHLK----LIWRRAGRLGVLEAALAR 1352
L A R G V LL RG + + + G T L E+ ++P + RIL+D+GAN D G T LL R +GC AVTEM + +++ AGA V+ R GG TPLF AA G L V LLR KA+ LL Q K LPLDVAA H+ VV EL+QQ+GL GCGG SGGA+AL+ G + I+A L DAGVVD G L +A G+ +V+ L+ ++ GD YV+ I ++ F+ + AP R+ + L++AG T V + ++D P ++ D ++ ++ G E + L +RRLL+Q EAV ATSW WP + C G ++ K PS L L+ RR + G+ AL R
Sbjct: 50 LIIACRHGELALVQLLLDRGA-DTERTNQEGRTALFESL--HYPRIARILIDRGANHGAQDNHGATPLLLAATRKSGCAGQAVTEMXXXXXXXXXXXXXXXXXXXXXXXXXQC--CAFMSLILGAGAGVNARHRPGGETPLFVAARLGRLLSVKVLLRFKADALLPAQFENRKDKWLPLDVAAHRGHLAVVRELVQQVGLGGCGGPSGGADALVITASEGRLDIMAFLLDAGVVDNGDGLRSAIKAGHSKSVRLLMERRAGDVK---QYVSSESIGDEARTVLFHCFHAQALAPSSCRIMQTLIEAGATTRVNVMIN--------YEDRPPTMLTDLVQYADYLINRGRTTLTAEEEMMHGLRGLRRLLMQKEAVTATSWAWPAGEGGMRC-GGTRGIRRTKKKTKPSAALATMMPLLRRRDAKRGMALRALTR 466 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig743.1.1 >prot_P-littoralis_Contig743.1.1 ID=prot_P-littoralis_Contig743.1.1|Name=mRNA_P-littoralis_Contig743.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=425bp MASRNELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPback to top mRNA from alignment at P-littoralis_Contig743:8309..11672- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig743.1.1 ID=mRNA_P-littoralis_Contig743.1.1|Name=mRNA_P-littoralis_Contig743.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3364bp|location=Sequence derived from alignment at P-littoralis_Contig743:8309..11672- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig743:8309..11672- >mRNA_P-littoralis_Contig743.1.1 ID=mRNA_P-littoralis_Contig743.1.1|Name=mRNA_P-littoralis_Contig743.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1275bp|location=Sequence derived from alignment at P-littoralis_Contig743:8309..11672- (Pylaiella littoralis U1_48)back to top |