mRNA_P-littoralis_Contig743.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig743.1.1
Unique NamemRNA_P-littoralis_Contig743.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 3.350e-67
Identity = 177/427 (41.45%), Postives = 233/427 (54.57%), Query Frame = 3
Query:  108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTAL-LRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTS-IYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQ--KEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKLIW----RRAGRLGVLEAALARHSGK 1364
            N+LH A  +GSA+   A+L+ G + ID+ +  G TPL+ A    H  + ++L+ KGAN SI D+ G+TAL    A     A+ ++L KA GA DL+A    + ++ ++ A                   D + P G T L  AA EG + V+ ELLR  ANPLL +  P      +PLD+AA+  H +VV ELIQ+LG++GC   S GA+AL  A    H+ I+A+LT+AGVVDTG AL  AA  G+EA+VKFLLR   KEG      +Y+    +   T PL+ C   C S APR+ R+LVDAG DTTS V++    G   VF+DTP       LRK     G     +   RLEAI RLLL+V+AVHA SWLWP      G A         PP   LKL+     RR  R   L A L R+S K
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKA-GA-DLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYT-PLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKG-GVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRAT---ETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.560e-61
Identity = 171/429 (39.86%), Postives = 227/429 (52.91%), Query Frame = 3
Query:  108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEG-DTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEG---QQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGD------ASRSKMPPSGHLKLIWRRAGRLGVLEAALARHSGK 1364
            N L  AA  GS K    LL+ G  +ID+G+  G TPL+ A+ G +P +VR+LL+KGA   + D                             D   +  H  T +  AA+ G +  V  L+ AG+ ++ R   G TPL+ AA  G++  V  LL AKA+PLL     + K   LPLDVAA+  H EVV+ELI+Q+G+DGCGG SGG NAL  A     + I+A+LTDAGVVDTG+AL  AA  G EA +KFLL Q  G  +T   +Y+        TS L+  I  C    PRV +LLV+AG DTTS V +    G +  F  TP  L +  L      GG + +    +++++LE IRRLLL+ EAVHA SWLWP       HA         A+ +   P   L +  R  GR G+L AAL R+S K
Sbjct:   16 NPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNH-CTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTS-LLDGIQRC---RPRVVQLLVEAGADTTSPVLICNQPGEDD-FHITPLGLTMCLL------GGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLL-AALLRYSSK 431          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 4.620e-60
Identity = 177/437 (40.50%), Postives = 222/437 (50.80%), Query Frame = 3
Query:  108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGG-TPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPAL-PLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVR----TSPLITCIFNCC----SGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASR------SKMPPSGH-LKLIWRRAGRLGVLEAALARHSGKP 1367
            N LH AA  GS +    LL+ G  +I++G     TPLI AAS  H  V+ ILL KGAN SIV + G TAL                                                        VDIR PV G TPLFRA  EG L    ELLRA ANPL+ +      LP L PLD AAR  ++ V+ ELIQ++G++GCGG+S G  ALL AG    +  +A+LT AGVVDTG AL  +A  G EA+VK+LL+       +   Y   A + VR    T+PL++ I+ C     S  PRVARLLV+AG DTT+ +R T + G   +F  TP  L +  L+     G    + Q+  RLE IRRLLLQVEAVHA SWLWP      G    +A+       +  P  G  L ++ RRA R GV+  AL RH  KP
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTAL--HVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAP----LPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQN------HAKHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGV-VLFSCTPLKLTVHILQDKKVDGTYISK-QRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 4.770e-50
Identity = 156/430 (36.28%), Postives = 206/430 (47.91%), Query Frame = 3
Query:  108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETC-HKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDD----TPKNLVIDTLR-KLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKLIW----RRAGRLGVLEAALARHSGKP 1367
            N LH AA  GS +    +L+ G  +ID+G+  G T L+ A+ G +  +V ++L+KGA  SI                                +EA T  H                          ++ R   G TPL+ AA +G++     LL AKA+PLL           LPLD AA   H EVV+ELI+Q+G+DGCGG SGG  AL  A    ++ I+ +LT+AGVVDTG+AL  AA  G E  +KFLL Q     T  ++           +PL+  I +     PRV RLLV+AG DTTS V +     RN +  D    TP  L ++ +R K+   G G    +Q  +LEAIRRLLL+VEAVHA SWLWP  I     AA   +      S  + L      RRA    V  AAL R+S KP
Sbjct:   16 NRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAV-----RNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 5.740e-50
Identity = 163/436 (37.39%), Postives = 208/436 (47.71%), Query Frame = 3
Query:  108 NELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIF----NCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLW----PKVICPAGHAAGDASRSKMPPSGHLK----LIWRRAGRLGVLEAALARHS----GKP 1367
            N+LH AAR GS     A+LS G I+ID GD +G TPL+ A   +HP VV ILL KGA+ S +++ G TAL  SA  G+  V                                                                         RAKANPLL +     +   LPLD AA+   + VV EL+Q+ G+ GCGG +GG  AL  A    HM ++  LT AGVVDTG+AL  A S G+   VKFLL+Q+ G  +   +YV+        +PLI  I       CS  P+V RLLVDAG DTTS VR T   G   V   TP +L  + LR +      A   +   RLE IRRLLL+VEAVHATSWLW    P+V  PAG  A   + S    +  L+    ++ RRA   G + A+L R++    GKP
Sbjct:   16 NKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGY--VVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQ--HLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCS--PKVVRLLVDAGADTTSIVRFTIQPGTLPVVC-TPLSLATEALR-IKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKLDGKP 443          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.850e-43
Identity = 129/324 (39.81%), Postives = 174/324 (53.70%), Query Frame = 3
Query:  414 TSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAG---DASRSKMPPSGHLKLIWRRAGRLGVLE---AALARHSGKP 1367
            T + +AA  G +  +  L++AGA ++ R   G TPLF AA EG++  V  LL AK +PLL     T +  +LPLDVAA   H+EVV+ELI+Q+G+ GCGG SGG  AL  A    H+ ++ +LT+AGVVDTG+A      +     ++  +   +G+  +G + V       R    I C    C   PRV RLLV+AG DTTS V +   DG     + TP  L   T+  LH  G      +Q + LEAI RLLL+VEA+HA SWLW   IC   ++     D + SK      L L  R+  R    E   AAL R+S KP
Sbjct:   19 TPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGRRIWR--RGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDA-IACWHQRCR--PRVVRLLVEAGADTTSTVPI---DGLPGTDNITPMGL---TMLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 3.900e-43
Identity = 145/423 (34.28%), Postives = 198/423 (46.81%), Query Frame = 3
Query:  105 RNELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTS-IYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKL--IWRRAGRLGVLEAALARHSGK 1364
            +NELHFAA  GS +   A+LS GLINI++GDP G TPL+ A+   +  +VRIL+ +GAN  IV + G+TA                  A GA DLEA T    +  ++LAADKGH             ++ R     T                   AKA+PLL +   +     +PLD AA      VV E + QLG+DGCGG S GA+AL HA     +  +A+L +AGVVDTG+AL  A  +  E ++KFLLRQ++       +YV  A      +PL+      CS        + D G                         LV   L +    G    E +Q  +L A+ RLLL+VEAVHA SWLW        H A    R+K+ PS   ++  +   + R   L +A+ R+S K
Sbjct:   14 KNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNA-GA-DLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDR-FVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLL------CS--------IEDEG-------------------------LVDHYLGENRVIGRDITE-EQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTAEVTKRTKVTPSPRSRMFPVLGLSTRRNALLSAVLRYSSK 393          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 4.810e-43
Identity = 154/422 (36.49%), Postives = 196/422 (46.45%), Query Frame = 3
Query:  108 NELHFAARIGSAKHVVALLS-RGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEP-TEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDS-YVTPAGIFVRTSPLITCIFNCCSGAPRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHLKLIWRRAGRLGVLEAALARHSGK 1364
            NELH AA  GSA+  +ALLS R  I++++GD AG TPL+ A +  HP VVRILL+ GAN SI+D+ G  AL                                                                                       A+PLL    P T  +  LPLDVA       VV EL+Q+LG++ CGGES G +AL  A    H+GI+AML  AGVVD G AL AAA++G EA+VKFLLRQ EG  +   S YV     F  T PL+  I  C   + R+ RLLVDAG DTT+A RLT   G+ A+   T    +   L +  A G     G++   L+A  RLLLQVEA HA SW+WP              R++ P    L +  R  G    L  A++R+S K
Sbjct:   16 NELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLT-PLLENI-TCGHCSARIVRLLVDAGADTTAAYRLTGKKGQ-AMAATTHLTAMGCLLLEKKAKGD---TGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEK 429          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.600e-42
Identity = 146/371 (39.35%), Postives = 185/371 (49.87%), Query Frame = 3
Query:  105 RNELHFAARIGSAKHVVALL-SRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTAL-LRSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGD--SYVTPAGIFVRTSPLITCIFNCCSG---APRVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQQRSRLEAIRRLLLQVEA 1196
            +N+LH AA  GS + VVALL SR  I ID G   G TPL+ AA      VVRILL+KGAN S+V E G+TAL   +   GH  VT                        LAA+ G  EV +V                                   RAKANPLL K  P+  +  +PLD AA     EVV ELI+Q+ + GCGG SGG  AL  A    ++ ++++L DAGV+DTG AL  AA + +EA VK LL+Q+ G +  G+   YV      V  +PL+  I    +G   +PRV RLLVDAG DT SAV L  T G+      TP +    +L +   GG  A E +   +L AI RL  QVEA
Sbjct:   16 QNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXX--XXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSG-VTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIG-RSVTPIDFATCSLHENMDGGKTAME-KHVHKLRAIHRLFSQVEA 381          
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Match: A0A6H5JFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP0_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.730e-40
Identity = 148/434 (34.10%), Postives = 205/434 (47.24%), Query Frame = 3
Query:  114 LHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHPCVVRILLDKGANPSIVDECGYTALL----RSAGCGHLAVTEMLTKAVGAEDLEAETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGG-TPLFRAAAEGHLGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLGLDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNEAAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAP---RVARLLVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRK----LHAGGGG-AGEGQQRSRLEAIRRLLLQVEAVHATSWLWPK----VICPAGHAAGDASRSKMPPSGHLK----LIWRRAGRLGVLEAALAR 1352
            L  A R G    V  LL RG  + +  +  G T L E+   ++P + RIL+D+GAN    D  G T LL    R +GC   AVTEM                                + +++ AGA V+ R   GG TPLF AA  G L  V  LLR KA+ LL  Q    K   LPLDVAA   H+ VV EL+QQ+GL GCGG SGGA+AL+     G + I+A L DAGVVD G  L +A   G+  +V+ L+ ++ GD      YV+   I      ++   F+  + AP   R+ + L++AG  T   V +         ++D P  ++ D ++     ++ G      E +    L  +RRLL+Q EAV ATSW WP     + C  G      ++ K  PS  L     L+ RR  + G+   AL R
Sbjct:   50 LIIACRHGELALVQLLLDRGA-DTERTNQEGRTALFESL--HYPRIARILIDRGANHGAQDNHGATPLLLAATRKSGCAGQAVTEMXXXXXXXXXXXXXXXXXXXXXXXXXQC--CAFMSLILGAGAGVNARHRPGGETPLFVAARLGRLLSVKVLLRFKADALLPAQFENRKDKWLPLDVAAHRGHLAVVRELVQQVGLGGCGGPSGGADALVITASEGRLDIMAFLLDAGVVDNGDGLRSAIKAGHSKSVRLLMERRAGDVK---QYVSSESIGDEARTVLFHCFHAQALAPSSCRIMQTLIEAGATTRVNVMIN--------YEDRPPTMLTDLVQYADYLINRGRTTLTAEEEMMHGLRGLRRLLMQKEAVTATSWAWPAGEGGMRC-GGTRGIRRTKKKTKPSAALATMMPLLRRRDAKRGMALRALTR 466          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig743.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI3.350e-6741.45EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KQV0_9PHAE1.560e-6139.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI4.620e-6040.50EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE4.770e-5036.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK3_ECTSI5.740e-5037.39EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXY7_ECTSI3.850e-4339.81EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1I8_ECTSI3.900e-4334.28EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI4.810e-4336.49EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JL33_9PHAE1.600e-4239.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFP0_9PHAE4.730e-4034.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig743contigP-littoralis_Contig743:8309..11672 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT11
PFAMsAnk_2,Ank_4
Model size3006
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.89e-73
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Ec32 ortholog descriptionEsV-1-199-related ankyrin repeat protein
Ec32 orthologEc-06_009980.1
Descriptionspectrin binding
Cds size1275
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791538.203115-UTR-P-littoralis_Contig743:8308..99441680791538.203115-UTR-P-littoralis_Contig743:8308..9944Pylaiella littoralis U1_48UTRP-littoralis_Contig743 8309..9944 -
1680791538.2462919-UTR-P-littoralis_Contig743:11577..116721680791538.2462919-UTR-P-littoralis_Contig743:11577..11672Pylaiella littoralis U1_48UTRP-littoralis_Contig743 11578..11672 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791538.2254474-CDS-P-littoralis_Contig743:9944..99631680791538.2254474-CDS-P-littoralis_Contig743:9944..9963Pylaiella littoralis U1_48CDSP-littoralis_Contig743 9945..9963 -
1680791538.235655-CDS-P-littoralis_Contig743:10321..115771680791538.235655-CDS-P-littoralis_Contig743:10321..11577Pylaiella littoralis U1_48CDSP-littoralis_Contig743 10322..11577 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig743.1.1prot_P-littoralis_Contig743.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig743 9945..11577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig743.1.1

>prot_P-littoralis_Contig743.1.1 ID=prot_P-littoralis_Contig743.1.1|Name=mRNA_P-littoralis_Contig743.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=425bp
MASRNELHFAARIGSAKHVVALLSRGLINIDEGDPAGTTPLIEAASGNHP
CVVRILLDKGANPSIVDECGYTALLRSAGCGHLAVTEMLTKAVGAEDLEA
ETCHKVTSIYLAADKGHSEVVRVLIDAGAKVDIRDPVGGTPLFRAAAEGH
LGVVVELLRAKANPLLAKQEPTEKLPALPLDVAARCEHVEVVHELIQQLG
LDGCGGESGGANALLHAGFVGHMGIIAMLTDAGVVDTGVALNAAASKGNE
AAVKFLLRQKEGDTTYGDSYVTPAGIFVRTSPLITCIFNCCSGAPRVARL
LVDAGIDTTSAVRLTTTDGRNAVFDDTPKNLVIDTLRKLHAGGGGAGEGQ
QRSRLEAIRRLLLQVEAVHATSWLWPKVICPAGHAAGDASRSKMPPSGHL
KLIWRRAGRLGVLEAALARHSGKP*
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mRNA from alignment at P-littoralis_Contig743:8309..11672-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig743.1.1 ID=mRNA_P-littoralis_Contig743.1.1|Name=mRNA_P-littoralis_Contig743.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3364bp|location=Sequence derived from alignment at P-littoralis_Contig743:8309..11672- (Pylaiella littoralis U1_48)
CGAGTCTCAGTCTCTCACCAGCAGCCCCACAGGCCACTCCATCCCTTTCT GTAGCATACCAAGATGTTGTCCCTGGAGGCTCTTTTAGAGCAAGAATGGC CTCCAGAAACGAACTGCATTTTGCGGCGAGGATTGGTTCCGCAAAGCATG TGGTGGCCCTGCTGTCCCGTGGGCTGATCAACATCGATGAAGGCGATCCC GCTGGCACAACACCTCTCATTGAGGCCGCCTCAGGCAACCACCCATGCGT GGTCAGGATCCTTCTGGATAAGGGAGCCAACCCATCAATCGTGGACGAGT GCGGTTATACGGCCCTGTTGCGTTCTGCTGGATGCGGACACCTCGCCGTG ACCGAGATGCTCACGAAGGCTGTTGGGGCAGAAGACCTGGAAGCGGAGAC TTGTCATAAGGTGACCTCGATTTACCTGGCTGCGGATAAAGGGCACTCGG AGGTGGTGAGAGTGCTGATCGATGCAGGCGCGAAAGTCGACATCCGGGAC CCCGTAGGAGGAACGCCACTATTCCGTGCGGCTGCAGAAGGACACTTGGG CGTGGTCGTGGAGCTCCTTCGTGCAAAAGCCAACCCCTTGTTGGCGAAAC AGGAACCGACGGAAAAGTTGCCTGCGCTCCCGTTGGACGTGGCAGCAAGA TGCGAGCACGTTGAGGTCGTCCACGAGCTGATACAGCAGCTTGGACTCGA CGGTTGTGGCGGTGAAAGTGGCGGTGCTAACGCTCTCCTTCACGCCGGAT TTGTTGGGCATATGGGTATCATAGCAATGCTGACGGACGCCGGGGTAGTC GACACGGGTGTAGCCCTGAACGCTGCCGCCTCAAAGGGCAATGAGGCAGC AGTAAAGTTCCTCTTGCGACAGAAGGAGGGAGACACAACGTACGGCGATT CTTATGTCACCCCGGCCGGGATATTTGTTCGTACATCACCCTTGATCACT TGCATTTTCAACTGCTGCTCAGGCGCTCCCAGAGTTGCGCGGCTCCTGGT TGACGCCGGGATAGACACAACATCGGCTGTTCGATTGACCACCACCGATG GAAGAAACGCGGTCTTCGACGACACACCCAAGAACCTCGTCATTGACACC CTTCGAAAGCTTCACGCTGGGGGAGGCGGCGCCGGAGAGGGGCAGCAGCG CAGCAGACTGGAGGCTATCCGCCGCTTGCTGTTGCAGGTGGAGGCAGTCC ATGCGACCTCTTGGTTGTGGCCCAAGGTTATCTGTCCTGCCGGCCATGCT GCTGGAGATGCAAGTAGATCTAAGATGCCGCCTTCGGGCCACCTGAAGTT GATTTGGCGAAGGGCTGGAAGGCTTGGTGTGCTCGAGGCGGCCTTGGCCA GGTGGGTGATGACGTGATACGGTCCCAGTGTTTTATCGGGAAGTGGGCGA GGCTGGGGATGGTTCATGTCAGATATCAAGCTGCCTTCTGCGCTGCTTCT ACTGCACCGCCCCTGCAGTAGCTGCTGAAGTGCTTACGTTCACTATTCGC ACGGGTCTTCTTGCCCAATACCGAATTAGTATAATCGTGCTTTGAAGGGA CAAAGTTAATAGGTTGAGTACATGCCCATATAGCTTCCGCTACATACTGT AGTTGGCCAGTGTTCCGACTTCTCGTGGTTTTTGGGACAGGATAATCACT TTAGCATTCGATGCTCGAGCTCGCGGTGTTACCAATCATTATCTCGTGCA TTTTTGCAGGCACTCGGGGAAGCCTTGACACCTGTCGGCTCCCAGGGAGG CGGAGAGCTACCTTTTCGGCGGACAAGGCAGCCACCGGAATACTGCCGTC ATTACAGCAGCACCGCCGCCATGCACATGGGTCAGAGGGGATGGCGTTGT AGTTGAGCTGTGTGGAAGAGGCTGTGGTTGCTGCAAAGGGTGAAGGTCAA GTACCTTCAACTTTGCAAGACGTCTTACAGTTTACTTTTCTCTTTGTTTA TCATCACTAGCACGGCCAACGGTAGATTTAAGCTTGCAGTTCTTTCCTTG ATGGCTGTTTGATAACGCAAGAGCGAAGAGGTTTTTTGTCTGCTGTCAGC TCAGAGCACGGCAGCAGTATTCAGAAGACCGCTCAGCATTCAGTGAATTG TGTCTTGCCCTGAAACCAAATCCCAAGCTATTTGCGAGCGTCAGCTGTGA TGCCGTTTCTGAGGGCAACCTCGTAGGGGTGAAATATCCGGCATTGTTTG CTGGCCTATGGTCTGACGTATGGTGTTCTCTGTTACAGCCGACCATGGTA CGAGCAACTGAAAAACAGGCTCCCCGCACAGCTAGGGTCGAACTTGTGGC AAGTTCTTTCGCTGTCGATGGGTAGAGTCAGTCGGGAGATCTGGCGTATT TCGTGCTGTGTTGTAGCATGGTTATATATCGAGCCCGACGCATGAGCTGC ATGCCTGTGGTAACGAGCACGGAAGGTGTACAGCCTAGCCGGCGTTGCGG AGATCGCCCCCTTCGTGTTATGGTTTCCGGGAACAACAGCGTACAGACAG CGGTAGTGTTGATGATCGAGCATAGACTAGCCGCGGTTGATCTGCCGGTA GTCTGGCTAGCATGGAGAGGCAAACTTTAAGTTGAGGTGCGTTCGTTGGC TACTTATTTCAAACTCGATGGCACCCTGGTCATGGCCGTATCGCGGTTTT TATTCCTCCTGCGTTTTTTTGCTCCGACAAACGACACTTTGGGTGGTGGA AGCGTACTCATGGAAACGGATCTTTCAAAATGTTAGGTGTGCATCCTTGT TGGAGAGCTCATCGTTCGGAGAGTCCGCAAAGTACTCCCTGAATGGTAGG TACGTAAACACACGAGGATGTGATGCTACAGATACCAAATCTGCGGGTGG AAAGTTGTGTCCTGTACCAAAGTTGCCGGTTAAATTTCGCAAATGTTGAT TGCAGTAGTTCTCAGACACTTGATGTTGGTATGTACACATATCCAGTACT TGTACATATCCAGTACTTGTACTGGATATGTGTACATACCGACAGAAGTA CAACCGGGGTTCGCATCCCTCTGTTACCATTCGTGGCGTTGTTGGTATGT ACACATATCCACTGTACTAGTCAGCGAGTACGAGACTCGCTGACTAGTAC AGTGGGTAACTAACTCGCTGACTAGTGGATATATATGTACCTACCCATGG ACTGTCACTTTTTTGGTGAATATCGTATAGATGGTGGCGTTGCGGCCGAT ATCACGTAGTAGACACCCCTGACCAAAAGTGTGACAGATATGCTTGTCTC TTCATGTAAGACACGGTCGGGACACAACTGTCCCAGGCCCGGAGCACGTG CGTTGTAGGTCGCTTGACCTATTAGGGGCGTTTTAATCATGAGTTTCTGA TGTCAATTATTTTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig743:8309..11672-

>mRNA_P-littoralis_Contig743.1.1 ID=mRNA_P-littoralis_Contig743.1.1|Name=mRNA_P-littoralis_Contig743.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1275bp|location=Sequence derived from alignment at P-littoralis_Contig743:8309..11672- (Pylaiella littoralis U1_48)
ATGGCCTCCAGAAACGAACTGCATTTTGCGGCGAGGATTGGTTCCGCAAA
GCATGTGGTGGCCCTGCTGTCCCGTGGGCTGATCAACATCGATGAAGGCG
ATCCCGCTGGCACAACACCTCTCATTGAGGCCGCCTCAGGCAACCACCCA
TGCGTGGTCAGGATCCTTCTGGATAAGGGAGCCAACCCATCAATCGTGGA
CGAGTGCGGTTATACGGCCCTGTTGCGTTCTGCTGGATGCGGACACCTCG
CCGTGACCGAGATGCTCACGAAGGCTGTTGGGGCAGAAGACCTGGAAGCG
GAGACTTGTCATAAGGTGACCTCGATTTACCTGGCTGCGGATAAAGGGCA
CTCGGAGGTGGTGAGAGTGCTGATCGATGCAGGCGCGAAAGTCGACATCC
GGGACCCCGTAGGAGGAACGCCACTATTCCGTGCGGCTGCAGAAGGACAC
TTGGGCGTGGTCGTGGAGCTCCTTCGTGCAAAAGCCAACCCCTTGTTGGC
GAAACAGGAACCGACGGAAAAGTTGCCTGCGCTCCCGTTGGACGTGGCAG
CAAGATGCGAGCACGTTGAGGTCGTCCACGAGCTGATACAGCAGCTTGGA
CTCGACGGTTGTGGCGGTGAAAGTGGCGGTGCTAACGCTCTCCTTCACGC
CGGATTTGTTGGGCATATGGGTATCATAGCAATGCTGACGGACGCCGGGG
TAGTCGACACGGGTGTAGCCCTGAACGCTGCCGCCTCAAAGGGCAATGAG
GCAGCAGTAAAGTTCCTCTTGCGACAGAAGGAGGGAGACACAACGTACGG
CGATTCTTATGTCACCCCGGCCGGGATATTTGTTCGTACATCACCCTTGA
TCACTTGCATTTTCAACTGCTGCTCAGGCGCTCCCAGAGTTGCGCGGCTC
CTGGTTGACGCCGGGATAGACACAACATCGGCTGTTCGATTGACCACCAC
CGATGGAAGAAACGCGGTCTTCGACGACACACCCAAGAACCTCGTCATTG
ACACCCTTCGAAAGCTTCACGCTGGGGGAGGCGGCGCCGGAGAGGGGCAG
CAGCGCAGCAGACTGGAGGCTATCCGCCGCTTGCTGTTGCAGGTGGAGGC
AGTCCATGCGACCTCTTGGTTGTGGCCCAAGGTTATCTGTCCTGCCGGCC
ATGCTGCTGGAGATGCAAGTAGATCTAAGATGCCGCCTTCGGGCCACCTG
AAGTTGATTTGGCGAAGGGCTGGAAGGCTTGGTGTGCTCGAGGCGGCCTT
GGCCAGGCACTCGGGGAAGCCTTGA
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