prot_P-littoralis_Contig741.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig741.28.1
Unique Nameprot_P-littoralis_Contig741.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length56
Homology
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BLAST of mRNA_P-littoralis_Contig741.28.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.150e-12
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0 
Query:    3 WEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHP 46
            WEY+G+  +G   DWLSED +L+  SFTPLQLDGF+ALWHLYHP
Sbjct:  758 WEYRGKLGSGAVSDWLSEDVMLR--SFTPLQLDGFVALWHLYHP 799
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BLAST of mRNA_P-littoralis_Contig741.28.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.120e-9
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:    3 WEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHPNIT 49
            WEYKG++  GV  DWL E+ +   +SFTPLQLD F+ALWHLY P + 
Sbjct: 1764 WEYKGKSGNGVVSDWLPEETM--RRSFTPLQLDCFVALWHLYFPQLA 1808
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig741.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMP6_9PHAE1.150e-1268.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE1.120e-957.45RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig741contigP-littoralis_Contig741:104007..104174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig741.28.1mRNA_P-littoralis_Contig741.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig741 103974..104395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig741.28.1 ID=prot_P-littoralis_Contig741.28.1|Name=mRNA_P-littoralis_Contig741.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=56bp
MSWEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHPNITL
GRGEP*
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