mRNA_P-littoralis_Contig741.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: D8LKN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKN8_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.540e-21 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 1
Query: 7 PSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
PSRGCHLITSEIVRQMPELREFKVGMAN+FLKHTSASITLNEN
Sbjct: 28 PSRGCHLITSEIVRQMPELREFKVGMANVFLKHTSASITLNEN 70
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: D8LMU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU1_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 2.210e-17 Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 1
Query: 7 PSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
PSRGCHLITSEI +Q+PELR F+VGMANIFLKHTSAS+T+NEN
Sbjct: 90 PSRGCHLITSEISKQVPELRSFRVGMANIFLKHTSASLTINEN 132
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A7D4SX87_9GAMM (YjbQ family protein n=2 Tax=Thiomicrorhabdus TaxID=2039723 RepID=A0A7D4SX87_9GAMM) HSP 1 Score: 73.9 bits (180), Expect = 1.240e-15 Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1
Query: 4 PPSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
P SRG HLIT EI+RQ+PEL+EFKVGM N+F++HTSAS+T+NEN
Sbjct: 11 PKSRGFHLITDEILRQLPELKEFKVGMMNVFIQHTSASLTINEN 54
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A4P9ZTP0_9FUNG (Uncharacterized protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZTP0_9FUNG) HSP 1 Score: 73.9 bits (180), Expect = 1.270e-15 Identity = 30/41 (73.17%), Postives = 40/41 (97.56%), Query Frame = 1
Query: 13 RGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
RGCHL+TS+IVR++PELR +++G+ANIFL+HTSAS+TLNEN
Sbjct: 15 RGCHLVTSDIVREVPELRNYRIGLANIFLQHTSASLTLNEN 55
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A1Y2G6G5_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G6G5_9FUNG) HSP 1 Score: 73.9 bits (180), Expect = 1.330e-15 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 1
Query: 1 PPPSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
P SRGCHL+T EI +Q+PEL++F VGMAN+FL+HTSAS+TLNEN
Sbjct: 11 PAKSRGCHLVTHEIEKQIPELKDFTVGMANVFLQHTSASLTLNEN 55
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A1E3PTG8_9ASCO (UPF0047-domain-containing protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PTG8_9ASCO) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-15 Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 1
Query: 10 SRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
S GC+L+T EIV Q+PELREFKVGMANIFL+HTSA++TLNEN
Sbjct: 13 SAGCYLVTDEIVSQVPELREFKVGMANIFLQHTSAALTLNEN 54
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A1P8WEH0_9PLAN (Secondary thiamine-phosphate synthase enzyme n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WEH0_9PLAN) HSP 1 Score: 73.2 bits (178), Expect = 2.610e-15 Identity = 30/42 (71.43%), Postives = 40/42 (95.24%), Query Frame = 1
Query: 10 SRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
SRGCHL+TSEI++Q+PE+ EFKVG+ N+F++HTSAS+TLNEN
Sbjct: 15 SRGCHLVTSEILQQVPEVAEFKVGLLNVFIQHTSASLTLNEN 56
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A433QAE9_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QAE9_9FUNG) HSP 1 Score: 72.8 bits (177), Expect = 2.650e-15 Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 1
Query: 4 PPSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
P RGCHLITSEI RQ+P+L+ FKVG+AN+FL+HTSAS+ LNEN
Sbjct: 20 PRPRGCHLITSEIERQLPDLKTFKVGLANVFLQHTSASLCLNEN 63
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A7S2XZV0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV0_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.040e-15 Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 7 PSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
PSRGCHLIT E+V Q+PELR F+VG A++F+KHTSAS+TLNEN
Sbjct: 62 PSRGCHLITREVVSQLPELRRFQVGTAHLFIKHTSASLTLNEN 104
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Match: A0A197K8K9_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K8K9_9FUNG) HSP 1 Score: 72.8 bits (177), Expect = 3.860e-15 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 1 PPPSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNEN 135
P RGCHL+T EI Q+PEL++F VGMANIFL+HTSAS+TLNEN
Sbjct: 11 PAKKRGCHLVTREIENQLPELKQFSVGMANIFLQHTSASLTLNEN 55 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig741.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig741.1.1 >prot_P-littoralis_Contig741.1.1 ID=prot_P-littoralis_Contig741.1.1|Name=mRNA_P-littoralis_Contig741.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=45bp PPPSRGCHLITSEIVRQMPELREFKVGMANIFLKHTSASITLNENback to top mRNA from alignment at P-littoralis_Contig741:123..257- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig741.1.1 ID=mRNA_P-littoralis_Contig741.1.1|Name=mRNA_P-littoralis_Contig741.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=135bp|location=Sequence derived from alignment at P-littoralis_Contig741:123..257- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig741:123..257- >mRNA_P-littoralis_Contig741.1.1 ID=mRNA_P-littoralis_Contig741.1.1|Name=mRNA_P-littoralis_Contig741.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=135bp|location=Sequence derived from alignment at P-littoralis_Contig741:123..257- (Pylaiella littoralis U1_48)back to top |