mRNA_P-littoralis_Contig74.159.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 1421 bits (3679), Expect = 0.000e+0 Identity = 908/1371 (66.23%), Postives = 968/1371 (70.61%), Query Frame = 2
Query: 377 RCGWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMDEEYHLLLEEGFVDGTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSTPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDDKYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVVEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRIGEAFASVSNNGSNSXXXXXXXXXXXXXXXXXKTGRTGIGRILKCRFAGGRRFRPARTRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPRRDRRPAGGVFAPGWAPDPAPTARNDSARESEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDEYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGNKVTSDKGRRGEVVEAKMDEGYTVFTVEWSEGKSKRSSAYSTEDVLRDRDDNQGVATLGKAKEKMGVFLLSTLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKLILEKAGITLGRR*RKLVRWTCSWIMKSRSWTPLRTKACGWRWKKNRASK*WD*STTPELT*RVS*EARKI-----SKTSI*LSSTTL*GGRRRPFGWVDPPTWRRP*SIFR*TSFLPESRPKH*RNK-TLSCINPVNRRLLAWG*GVSWRGHG*RIQKSLVTGDLRPASF**GIRC-------------------TGFWIFPGLIIFLCVRQRSIRVML------HQHFATEMRTVKRFLRTVSG--KR-----IWTCLT*SRGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKDDIVKMCNEVLEMNPRKRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAQDLYRMKCQDVHGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRRLLEKEAEKDLAELRKKGGCTEK 4375
R WELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISS+ECPMMLHDGYGHFKALIPLRRMPLEF+M+EEYHLLL+EGFVDGTDEEEAVPGTSD ETSDGTDEVPESAVAVDVAGTEASDGGSTPS +SSDSGGGDSDLGARGAFGE+AEGEEVKAATR+SSKRSHPWDDD+YWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEV EXXXXXXXXXXXXXX AGEE + + N+SARESE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPD+YTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCL KGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPG +VTSDKGRRGE+VEAKMDEGYTVFTVEWSEGKS R SAYSTEDVLRDRDDNQGVATL +AKEKMGVFLL+TLCMVN QVYRFITKNTKLENVSVSSETRPLARDK + IT GR W++ + ++ D E+T S E + + KT + + R G V + + F+ ++ + T + ++ + GV + + Q + + P SF G+RC T ++ + L R + L H + +R + + S KR ++ + GYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKDDIVKMCNEVLEMNPRKRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLA+DLYRMKC+DV+GNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMR L + ++ +KGG K
Sbjct: 67 RAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSQECPMMLHDGYGHFKALIPLRRMPLEFEMEEEYHLLLDEGFVDGTDEEEAVPGTSDSETSDGTDEVPESAVAVDVAGTEASDGGSTPSPESSDSGGGDSDLGARGAFGENAEGEEVKAATRLSSKRSHPWDDDEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXXAGEEERSRVT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNSARESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDKYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLDKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGTEVTSDKGRRGELVEAKMDEGYTVFTVEWSEGKSNRRSAYSTEDVLRDRDDNQGVATLEEAKEKMGVFLLATLCMVNAQVYRFITKNTKLENVSVSSETRPLARDKTV-----DITKGR---------------------------NHAWEETKKARAVDTLMDNEVTFLDSSEDKGLRVEMEEKTCFEMMGL-INDARAHFTGLVRSTEDFQDKHLAFVNHFVRGAQASFRLGRPTNMASSMIHLSVNELPPGVQAKTL--KEQDTQLYQPGEPTSFSLGMRCVLARARVKDSEEFGDGGSSTCQFLMRYPLYRLLDLSRVDNLPLCPTTEHSSHVSPTLRHRDAYSQAFSSHSKRKADLDVFDII--KGGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKDDIVKMCNEVLEMNPRKRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAKDLYRMKCKDVYGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRSFLRRRRKRTWQSSERKGGVPRK 1223
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D7FVQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ8_ECTSI) HSP 1 Score: 990 bits (2560), Expect = 0.000e+0 Identity = 630/876 (71.92%), Postives = 647/876 (73.86%), Query Frame = 2
Query: 377 RCGWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMDEEYHLLLEEGFVDGTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSTPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDDKYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVVEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRIGEAFASVSNNGSNSXXXXXXXXXXXXXXXXXKTGRTGIGRILKCRFAGGRRFRPARTRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPRRDRRPAGGVFAPGWAPDPAPTARNDSARESEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDEYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGNKVTSDKGRRGEVVEAKMDEGYTVFTVEWSEGKSKRSSAYSTEDVLRDRDDNQGVATLGKAKEKMGVFLLSTLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKLILEK 3004
R WELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECP MLHDGYGHFKALIPLRRMP EYHLLLEE FVDGTDEEEAVPGTSDL DEV ESAVAVDVAGTEASDGGS PSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDD++YWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLET+LAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEV EXXXXXXXXXXXXXX EAGEE + + N+SARESEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGD+NSDLEDSGYAPSEAGDTD ECSSTGGETRCEGCEEDFYCELVECPT NAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFS+GGVTDGPDEYTDT+SGSVSGNSKRRRRSAGKK N IPRTSSPRE LMVPKDDQQA+LMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKG+PV EEIWRKCEKENY LYGITVRRAGPTGETIPG KVTSDKGRRGEVVEAKMDEGYTVFTVEWSEGKS R SAYSTEDVLR RDDNQGVATL +AKEKMGVFLL+TLC+VNVQVYRFITKNTKLE VSVSSETRPL+RD K+ + K
Sbjct: 112 RAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPTMLHDGYGHFKALIPLRRMP-------EYHLLLEESFVDGTDEEEAVPGTSDLXXXXXXDEVTESAVAVDVAGTEASDGGSMPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXEAGEEERSRVT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNSARESEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDKNSDLEDSGYAPSEAGDTDGDNDEDTTSDECSSTGGETRCEGCEEDFYCELVECPTYNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSTGGVTDGPDEYTDTESGSVSGNSKRRRRSAGKKDNCIPRTSSPRELLMVPKDDQQAKLMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGSPVREEIWRKCEKENYALYGITVRRAGPTGETIPGTKVTSDKGRRGEVVEAKMDEGYTVFTVEWSEGKSNRRSAYSTEDVLRTRDDNQGVATLEEAKEKMGVFLLATLCVVNVQVYRFITKNTKLETVSVSSETRPLSRDIKVDIIK 803
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D7FGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY2_ECTSI) HSP 1 Score: 786 bits (2029), Expect = 1.420e-263 Identity = 512/706 (72.52%), Postives = 526/706 (74.50%), Query Frame = 2
Query: 377 RCGWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMDEEYHLLLEEGFVDGTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSTPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDDKYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVVEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRIGEAFASVSNNGSNSXXXXXXXXXXXXXXXXXKTGRTGIGRILKCRFAGGRRFRPARTRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPRRDRRPAGGVFAPGWAPDPAPTARNDSARESEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDEYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENK 2494
R WELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLV CDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQ+++EYHLLLEE FVD TDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGS PSAQSS SGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRS PWDD++YWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLET+LAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEV EXXXXXXXXXXXXXXAEAGEE TQGRP+RDRRPAGGVFAPGWAPDPAP ARNDSARESEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGD+NSDLEDSGYAPSEAGDTD ECSSTGGETRCEGCEEDFYCELVECPTCNA+YCQDCENDLSSDKERT SRCQRADDDGVGDFS+GGVTDGPDEYTDT+SGSVSGNSKRRRRSAGKK N IPRTSSPRE LMVPKDDQQA+LMLSLYRKAREMERKLAG+ +
Sbjct: 125 RAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQINQEYHLLLEESFVDVTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSMPSAQSSGSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSQPWDDNEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXAEAGEE----------------------------------------------------------------------------------------------------------------------------------------------------------TQGRPKRDRRPAGGVFAPGWAPDPAPNARNDSARESEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDKNSDLEDSGYAPSEAGDTDGDNDEDTTSDECSSTGGETRCEGCEEDFYCELVECPTCNAKYCQDCENDLSSDKERTYSRCQRADDDGVGDFSTGGVTDGPDEYTDTESGSVSGNSKRRRRSAGKKDNCIPRTSSPRELLMVPKDDQQAKLMLSLYRKAREMERKLAGKTR 676
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D8LK60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK60_ECTSI) HSP 1 Score: 784 bits (2024), Expect = 6.580e-263 Identity = 527/733 (71.90%), Postives = 537/733 (73.26%), Query Frame = 2
Query: 377 RCGWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMDEEYHLLLEEGFVDGTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSTPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDDKYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVVEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRIGEAFASVSNNGSNSXXXXXXXXXXXXXXXXXKTGRTGIGRILKCRFAGGRRFRPARTRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPRRDRRPAGGVFAPGWAPDPAPTARNDSARESEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDEYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGNPVS 2575
R WELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEF+M+E YHLLL+EGFVDGTDEEEAVPGTSD ETSDGTDEVPESAV VDVAGTEASDGGSTP A+SSDSGGGDSDLGARGAFGE+AE VKAATRVSSKRSHPWDDD+YWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEV EXXXXXXXXXXXXXX EAGEE + + N+SARESEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPD+YTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELM SLYRKAREMERKLAGENKRI EVRNLTLLDLTEAASCL KGNPVS
Sbjct: 123 RAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFEMEEGYHLLLDEGFVDGTDEEEAVPGTSDSETSDGTDEVPESAVVVDVAGTEASDGGSTPCAESSDSGGGDSDLGARGAFGENAE---VKAATRVSSKRSHPWDDDEYWDDDANYYSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXEAGEEERSRVT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNSARESEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDKYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMFSLYRKAREMERKLAGENKRINEVRNLTLLDLTEAASCLDKGNPVS 675
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: A0A6H5JW77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW77_9PHAE) HSP 1 Score: 499 bits (1285), Expect = 2.180e-158 Identity = 346/596 (58.05%), Postives = 360/596 (60.40%), Query Frame = 2
Query: 962 YSGCTIVGEDGWTLVGKEGRRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDETDENEAAEVDEAVDEVVEXXXXXXXXXXXXXXAEAGEEVQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAVTSTTVLLRIGEAFASVSNNGSNSXXXXXXXXXXXXXXXXXKTGRTGIGRILKCRFAGGRRFRPARTRRNGRGFWARGQRRSEGELLVMDDDSARIFGMVLAFLRGGAKSGDQQQTQGRPRRDRRPAGGVFAPGWAPDPAPTARNDSARESEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDENSDLEDSGYAPSEAGDTDXXXXXXXXXXECSSTGGETRCEGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERTCSRCQRADDDGVGDFSSGGVTDGPDEYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGNKVTSD-KGRRGEVVEAKMDEGYTVFT 2746
+SGCTIVGEDGWTLVGKEGRRMGLETSLAFDE PLFLDHDDETDENEAAEVDEAVD+V E XXXXXXXXXXXXXAEAGEE+QQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAA+T TTVLLRIGEAFAS GR +RDRRPAGGVFAPGWAPDPAPTA NDSARESE XXXXXXXXXXXXX AS + E APSEAGDTD +CSSTGGETR EGCEEDFYCELVECPTCNAQYCQDCENDLSSDKER NSKRRRRSAGKKHNRIP TSSPRESLMVPKDDQQAE +L LYRKAREMERKLAGENKRI EVRNLTLLDLTEAASCL KGNPVSEEIWRKCEKENYGLYGITV RAGPTGETIPG KVTSD +G+ + +A+ +G T T
Sbjct: 12 FSGCTIVGEDGWTLVGKEGRRMGLETSLAFDE--------------PLFLDHDDETDENEAAEVDEAVDKVGEDXXXXXXXXXXXXXAEAGEELQQTIVVHEGTTISPWMLAFFLPLLLAVGAALFLVFQAAMTFTTVLLRIGEAFAS-----------------------------------------------------------------------------------------------------GRLKRDRRPAGGVFAPGWAPDPAPTAHNDSARESEX------------------------------------XXXXXXXXXXXXXDAASLDGVSDGEEGLRVAPSEAGDTDGDIDDDTTSDKCSSTGGETRREGCEEDFYCELVECPTCNAQYCQDCENDLSSDKERLW------------------------------------NSKRRRRSAGKKHNRIPTTSSPRESLMVPKDDQQAERILILYRKAREMERKLAGENKRINEVRNLTLLDLTEAASCLDKGNPVSEEIWRKCEKENYGLYGITVHRAGPTGETIPGTKVTSDCRGKLLQRSQAQFTKGATAAT 420
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: A0A6H5JY76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY76_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 1.340e-128 Identity = 286/585 (48.89%), Postives = 326/585 (55.73%), Query Frame = 2
Query: 2720 MDEGYTVFTVEWSEGKSKRSSAYSTEDVLRDRDDNQGVATLGKAKEKMGVFLLSTLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKLILEKAGITLGRR*RKLVRWTCSWIMKSRSWTPLRTKACGWRWKKNRASK*WD*STTPELT*RVS*EARKISKTSI*LSSTTL*GGRRRPFGWVDPPTWRRP*SIFR*TSFLPESRPKH*RNK-TLSCINPVNRRLLAWG*GVSWRGHG*RIQKSLVTGDLRPASF**GIRCTGFWIFPGLIIFLCVRQRSIRVMLHQHFATEMRTVKRFLRTVSGKRIWT-------CLT*----SRGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKDDIVKMCNEVLEMNPRKRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAQDLYRMKCQDVHGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRRLLEKEAEKDLAELRKKGGCTEKALERVAESYTLTPHLGPFDDK 4438
MDEGY VFTVEWSEGKS R S+YSTEDVLRDRDDNQGVATL +AKEKMGVFLL+TLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKK+ IT GR + +W KK++ RV E + + ++ R G V + + F+ ++ + T + ++ + GV + + Q + + P SF G+RC V R+ RV + F + +FL + + ++ CL+ GYHSVSQEKRSEKGVIENEN RIAFGAKFNKGRTHLVGSDE +LEMNPRKRENEDHLCPPEFKQR EAIVDELVE NK LA+DL RMKC+DV+G DVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRRLLEKEAE DLAELRKKGGCTEKALERVAES L P P K
Sbjct: 1 MDEGYIVFTVEWSEGKSNRRSSYSTEDVLRDRDDNQGVATLEEAKEKMGVFLLATLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKV-----DITKGR---------------NHAWEET---------KKDKGL-------------RVEMEEKACFEMMGLINDA-----RAHFTGLVRSTEDFQDKHLALVNHFVRGAQASFRLGRPTNMASSMIHLSVNELPPGVQAKAL--KEQDTQLYQPGEPTSFSLGMRC--------------VLARA-RVKDSEEFGDGGSSTCQFLMRDAYSQAFSSHSKRKACLSVFDIIKGGYHSVSQEKRSEKGVIENENGRIAFGAKFNKGRTHLVGSDE------------------------------------LLEMNPRKRENEDHLCPPEFKQRNEAIVDELVEENK--------------------------------LAKDLCRMKCKDVYGKDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRRLLEKEAENDLAELRKKGGCTEKALERVAESLLLYPIWVPLTTK 453
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: A0A6H5JVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ6_9PHAE) HSP 1 Score: 360 bits (924), Expect = 3.520e-109 Identity = 182/196 (92.86%), Postives = 187/196 (95.41%), Query Frame = 2
Query: 377 RCGWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQMDEEYHLLLEEGFVDGTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSTPSAQSSDSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSHPWDDDKYWDDDANYY 964
R WELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEEC MMLHDGYGHFKALIPLRRMPLEF+MDEEY LLL+EGFVDG DEEEAV GTSD ETSDGTDEVPESAVAVDVAGTEASDGGSTPSA+SSDSGGGDSDLGARGAFGEDAEGEEVKAAT VSSKRSHPWDDD+YWD DANY+
Sbjct: 125 RAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECSMMLHDGYGHFKALIPLRRMPLEFEMDEEYRLLLDEGFVDGADEEEAVLGTSDSETSDGTDEVPESAVAVDVAGTEASDGGSTPSAESSDSGGGDSDLGARGAFGEDAEGEEVKAATGVSSKRSHPWDDDEYWDHDANYF 320
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D7FR94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR94_ECTSI) HSP 1 Score: 235 bits (600), Expect = 4.670e-67 Identity = 138/220 (62.73%), Postives = 148/220 (67.27%), Query Frame = 1
Query: 43 KNVPATPKLCDNSRVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTHCEEIFEAVSGELTDDIKEYVQSLRANIVSTCGDQFAFKDGEELASFDDIVHDPMWVIVTRAMW-------VGAGDTSSNWISRRKGGVAVGEVPRVARI*DSQARRRPLGPM*CRGPHLLRRVP---HDAARRLRALQGPDSTSKNATGVPDG*RVPFASRRGFRGRHR 672
KNVPATPKLCDNSRVYFTTEGAQYMALDVGGGGLCALLGVIAVAMD GT CEEIFEA+SGELTD + EYVQSLRANIVSTCGDQFAFKDGEELASFDDIVHDPMWVI TRAMW G D + W+ + G+ R+ + D G GP P HD +AL + GVPD RVPFASRR FRGRHR
Sbjct: 2 KNVPATPKLCDNSRVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDDVGTPCEEIFEAISGELTDVMTEYVQSLRANIVSTCGDQFAFKDGEELASFDDIVHDPMWVIATRAMWELVTLHPTGYLDGRAVWLLAKFLGL---HGFRIVKHEDGHLVSCDAG-----GPISSEECPMMLHDGYGHFKAL----IPLRRMPGVPDKSRVPFASRREFRGRHR 209
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D7FZH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH0_ECTSI) HSP 1 Score: 201 bits (511), Expect = 2.310e-48 Identity = 125/267 (46.82%), Postives = 168/267 (62.92%), Query Frame = 2
Query: 2204 ERTCSRC-QRADDDGVGDFSSGGVTDGPDEYT---DTDSGSVSG--NSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGNPVSEEIWRKCEKENYGLYGITVRRAGPTGETIPGNKVTSDKGRRGEVVEAKMDEGYTVFTVEWSEGKSKRSSAYSTEDVLRDRDDNQGVATLGKAKEKMGVFLLSTLCMVNVQVYRFITKNTKLENVSVSSETRPLARDK 2986
E C+ C + D+ G G +G E DT +G+ SG SK+ ++ + NR+ +T S E+L+VPKDD+QAE + + Y +A E ERKL K I EVRNLT LD+T A++CL KG PV E+IWRK EKE+YGLYGIT RR E + G KVTS +GEVV A+ +GY FT+EWS+ + K++S Y T DVLRDRDD QGV +LG+A ++ FL S CM +VQ + FIT N K+ + + TRPL++DK
Sbjct: 811 ELRCAGCLEEESDERAGSVGDAGAVEGDPESDVNGDTCTGATSGVPASKKSKQCRRQVCNRLHKTCSQNEALVVPKDDEQAERIFANYNEANEHERKLTASKKTINEVRNLTYLDITRASTCLDKGLPVGEDIWRKLEKEDYGLYGITTRR-----EEVSGTKVTSAN-NKGEVVVARRVKGYNTFTIEWSDSR-KKNSEYKTGDVLRDRDDGQGVVSLGEATRRIERFLRSARCMADVQFHEFITNNVKVHD---AKSTRPLSQDK 1067
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI) HSP 1 Score: 176 bits (445), Expect = 2.800e-40 Identity = 239/880 (27.16%), Postives = 365/880 (41.48%), Query Frame = 2
Query: 2357 KHNRIPRTSSPRESLMVPKDDQQAELMLSLYRK-AREMERKLAGENKRIKEVRNLTLLDLTEAASCLAKGNPVSE--EIWRKCEKENYGLYGITV---RRAGPTGETIPGNKVTSDKGRRGEVVEAKMDEGYT--VFTVEWSEGKSKRSSAYSTEDVLRDRDDNQGVATLGKAKEKMGVFLLSTLCMVNVQVYRFITKNTKLENVSVSSETRPLARDKKLIL--EKAGITLGRR*RKLVRWTCSWIMKSRSWTPLRTKACGWRWKKNRASK*WD*STTPELT*RVS*EARKISKTSI*LSSTTL*GGR-RRPFGWVDPPTWRRP*SIFR*TSFLPESRPKH*RNKTLS---CINPVNRRLLAWG*GVSWRGHG*RIQKSLVTGDLRPA-SF**GIRC-----------TGF--WI--FPGLIIFLCVRQRSIRVML----HQHFATEMRTVKRFLRT------VSGKRIWTCLT*SRGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPD----KDDIVKMCNEVLEMNPR----------KRENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAQDLYRMKCQDVHGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRRLLE----------KEAEKDLAELRK---KGGCTEK-----ALERVAESYTLTP-----------------------HLGP----FDDKGRVFTPSQVTGMYKWLGQRTMGLSHFGTHIIRSNHATAVAMYCVRTGLSHDDQAVKDLFALARHGDKQRIRFYT----KVKGDTPNS 4687
K R+P S L+ DD + L RK AR++ ++ G+ + + R LTL ++ +AA G+ + W+K K +Y LYGITV R G + G KV GR G V +D+ +FTV+W E ++ Y ++ + D V T+G K ++ +FL LCMVNVQV R+ T SSE R R L E A T+ R K + + + TP K + + PEL R + K + L G + + G V + F+ ++ + S C+ PV+ + + ++VT + A G+R +G W+ FP +F+ R I + + A++ R L+T S + Y V+ KRS+ EN +R+ G K++ GR L E + L + V + I FM+++ + +D++VKMC EVLE KR +EDHL P ++ +I+A+V + V SD++ S L +LDSL A LR QD LG LA +Y V G + +LP KN +AL+ S G+VV H K ++ +G YAVM VIGR++MR+ LE ++A+ +LA+ + K G + A ER Y T LG F G+ + S + MYK++G+ +GL FG +I+RS H T V C + G+ +DD + FALARHG+ +R R Y + D PNS
Sbjct: 792 KRGRLPLPSGRHSGLVNFGDDDKLRDQLEGNRKRARDLREEIRGDRAKA-DHRYLTLCEI-KAALMDVDGDTGGDFDTAWKKLGKIDYRLYGITVMGRRLRGKGVQYEKGTKVRDSDGREGVVAGYSLDKETCSGLFTVQWGEKETTEHGLYDVLELAENFGDPD-VVTIGDDKWRVRMFLRGVLCMVNVQVRRYTT----------SSENRVTRRRNLYTLPSESADRTMAMR--KTAYEEIQDVSSASTMTPYEIKIL-------------ESPSDPELV-------RDLEKAGSFFTMLGLDGFKDTQELGLVYVREEFHKRQVEFANHFIRGAQVAWKLGRPTSFESCLVPVSAGGVYTELPSEINCASCDRENTVVTNTCQQARECGLGVRALLVKARVGSVESGCYKWMKHFPLYRVFVDTRPDRIGKINVGTENTSHASQTRKDAALLKTGVDVSATSSQDRAVLKQIGEKYKEVANVKRSDASDYENGLKRVGNGQKYDNGR--LARGAEWKKDLKFLGDSVEESVIAPFMDRIGEDAEGRDEVVKMCMEVLEDKSDATHNKNRYLGKRLDEDHLYPDSYRAQIDAVVGMFWDSG-VDASDLASFSQGLQILDSLTAACLRPQDWLGCLASQVY------VKGTRLIF---VLPPECKNSEALKKSDIGLVVTHAKSDRTKGPYAVMMVIGRRLMRKHLEANYKDARSQVQKAQTNLADAVRNSTKDGVVKARKILAAAERQLTEYAPTESERKNEEDRAKAEKRDQREIGYAELGDKVCTFTAYGKNYDQSMLNDMYKYVGEYYLGLPAFGPNILRSIHVTDVMEVCYKIGIHYDDMRLVRHFALARHGEFERKRAYNGHTMDMVQDDPNS 1624 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig74.159.1 >prot_P-littoralis_Contig74.159.1 ID=prot_P-littoralis_Contig74.159.1|Name=mRNA_P-littoralis_Contig74.159.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=828bp MMLHDGYGHFKALIPLRRMPLEFQMDEEYHLLLEEGFVDGTDEEEAVPGTback to top mRNA from alignment at P-littoralis_Contig74:632905..638870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig74.159.1 ID=mRNA_P-littoralis_Contig74.159.1|Name=mRNA_P-littoralis_Contig74.159.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5966bp|location=Sequence derived from alignment at P-littoralis_Contig74:632905..638870+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig74:632905..638870+ >mRNA_P-littoralis_Contig74.159.1 ID=mRNA_P-littoralis_Contig74.159.1|Name=mRNA_P-littoralis_Contig74.159.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2484bp|location=Sequence derived from alignment at P-littoralis_Contig74:632905..638870+ (Pylaiella littoralis U1_48)back to top |