prot_P-littoralis_Contig74.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig74.18.1
Unique Nameprot_P-littoralis_Contig74.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length185
Homology
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Match: D7FMU4_ECTSI (HELP domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMU4_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 2.390e-79
Identity = 114/138 (82.61%), Postives = 124/138 (89.86%), Query Frame = 0
Query:   47 SKDLLFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQGRPDLEPVSADRCTPAVVEGQAQLGPMLAAGYKTGQVEVYRYPCQNQGARSISATGHSTAASRVRFNADGRVLLSVGSDSRVVLQHSILPPLPPI 184
            SKDLLFFH  DGR+MTAKSKTKD+ FETQTCPAGW VQA WPQGRPDLEPVS DRCTPA+VEGQ QLG +LA GYKTGQVEV+RYPCQNQGARS+SA GHST A RVRFNADG  L+S+GSDSRVVLQHS+LPPLPP+
Sbjct:   32 SKDLLFFHVEDGRRMTAKSKTKDLAFETQTCPAGWTVQATWPQGRPDLEPVSTDRCTPALVEGQPQLGALLAVGYKTGQVEVFRYPCQNQGARSVSAGGHSTEAGRVRFNADGTALISIGSDSRVVLQHSVLPPLPPV 169          
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Match: A0A6H5L9W0_9PHAE (HELP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9W0_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 5.910e-62
Identity = 106/130 (81.54%), Postives = 116/130 (89.23%), Query Frame = 0
Query:    1 SSGQIYVHDATDHYSLKATTRKPDDGSSITDVDFSTDKEALQATTSSKDLLFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQGRPDLEPVSADRCTPAVVEGQAQLGPMLAAGYKTGQVEVYR 130
            SSGQIYVHDA DHYSLK TT+K +D SSIT +DFSTD+E LQATTSSKDLLFFH ADGR++TAKSKTKD+ FETQTCPAGW VQA WPQGRPDLEPVS DRCTPA+VE Q QLG +LAAGYKTGQVEV+R
Sbjct:  951 SSGQIYVHDAADHYSLKCTTKKLEDVSSITSMDFSTDREVLQATTSSKDLLFFHVADGRRLTAKSKTKDLAFETQTCPAGWTVQATWPQGRPDLEPVSTDRCTPALVERQPQLGALLAAGYKTGQVEVFR 1080          
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Match: A0A7S1C976_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C976_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.220e-13
Identity = 54/173 (31.21%), Postives = 88/173 (50.87%), Query Frame = 0
Query:    4 QIYVHDATDHYSLKATTRKPDDGSSITDVDFSTDKEALQATTSSKDLLFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQ--GRPDLEPVSADRCTPAVVEGQAQLGPMLAAGYKTGQVEVYRYPCQNQGARSISATGHSTAASRVRFNADGRVLLSVGSDSRVVLQ 174
            +IY++D +  + LK T  K +  S IT  DFS D   +Q+   + +LLFF++  G Q+ + +  +D  + T TC  GW VQ  WP      D+  V+           ++  G +LA     G V+++ YP   QGA+    TGHS+  + VR+    + +++VG + R V Q
Sbjct:  727 KIYLYDVSTFH-LKGTCAKHN--SYITHFDFSVDSSTIQSNCGAYELLFFNSETGDQIPSATSLRDKEWATWTCVLGWPVQGIWPAFADGTDINAVA-----------RSDDGKLLATADDFGNVKIFNYPANVQGAQYRMLTGHSSHVTNVRWVRGDQRVITVGGNDRGVFQ 885          
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Match: F4Q7F1_CAVFA (HELP domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q7F1_CAVFA)

HSP 1 Score: 65.9 bits (159), Expect = 2.830e-9
Identity = 42/151 (27.81%), Postives = 70/151 (46.36%), Query Frame = 0
Query:   27 SSITDVDFSTDKEALQATTSSKDLLFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQGRPDLEPVSADRCTPAVVEGQAQLGPMLAAGYKTGQVEVYRYPCQNQGARSISATGHSTAASRVRFNADGRVLLSVGSDSRVVLQHSI 177
            S+I  +D+S D   LQ+   + +LLF+      Q+T     KD  + T +C  GW VQ  W +G    +  S       V    +Q   +L  G  T  V +++YP  N+        GHS+  + V F+ D + +++ GS  R ++  S+
Sbjct:  515 SAILHIDWSVDGNYLQSNCEAYELLFWDAKTSLQITQSHTLKDTEWATWSCKLGWPVQGIWSKGEDGSDINS-------VYRSNSQ--DLLVTGDDTFNVNLFKYPVNNENTNKRIYKGHSSHVTSVMFSKDDKYIVTTGSGDRTIIIWSV 656          
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Match: A0A8C4T793_ERPCA (EMAP like 1 n=17 Tax=Polypteridae TaxID=8289 RepID=A0A8C4T793_ERPCA)

HSP 1 Score: 64.3 bits (155), Expect = 1.000e-8
Identity = 43/150 (28.67%), Postives = 72/150 (48.00%), Query Frame = 0
Query:   29 ITDVDFSTDKEALQATTSSKDLLFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQGRPDLEPVSADRCTPAVVEGQAQLGPMLAAGYKTGQVEVYRYPCQNQGARSISATGHSTAASRVRFNADGRVLLSVGSDSRVVLQHSIL 178
            IT +D+S D + L + +   ++L++  +  +Q+ +   T+DI +ET TCP G+ V   WP+G    +         AV     +    L+ G   G+V ++ YPC    A S    GHS+  + V F  D   L+S G     V+Q  ++
Sbjct:  677 ITHLDWSVDSQYLMSNSGDYEILYWIPSVCKQVVSVETTRDIEWETCTCPLGFHVFGLWPEGSDGTD-------INAVYRSHDKT--FLSTGDDFGKVHLFSYPCSQFRAPSHVYGGHSSHVTNVSFLFDDSYLISTGGKDMSVMQWRVV 817          
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Match: UPI0018849444 (echinoderm microtubule-associated protein-like CG42247 n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018849444)

HSP 1 Score: 57.0 bits (136), Expect = 3.400e-6
Identity = 42/159 (26.42%), Postives = 73/159 (45.91%), Query Frame = 0
Query:   29 ITDVDFSTDKEALQATTSSKDLLFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQGRPDLEP-------VSADRCTPAVVEGQAQLGPMLAAGYKTGQVEVYRYPCQ---NQGARSISATGHSTAASRVRFNADGRVLLSVGSDSRVVLQHSI 177
            +T +D+STD E LQA T   +L+ ++     +   +   +D  + + TC  G+ V  AWP    D +          + +    V   +++   +LA G   G +++YRYPC     + A+  S    S+  +  RF   GR L++VG     +LQ  +
Sbjct: 1010 LTQLDWSTDGECLQAVTVDHELILWNKRSLTKEKFQFNLRDKNWASYTCTVGYPVLGAWPDLHFDRQQGVWSDSYADSRKAKVLVSACRSRDHDLLAVGDSEGGIQLYRYPCPLNVKEAAQCHSYKPQSSYVASARFLRSGRQLVTVGGTDATLLQWRV 1168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FMU4_ECTSI2.390e-7982.61HELP domain containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L9W0_9PHAE5.910e-6281.54HELP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1C976_9STRA1.220e-1331.21Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20... [more]
F4Q7F1_CAVFA2.830e-927.81HELP domain-containing protein n=1 Tax=Cavenderia ... [more]
A0A8C4T793_ERPCA1.000e-828.67EMAP like 1 n=17 Tax=Polypteridae TaxID=8289 RepID... [more]
UPI00188494443.400e-626.42echinoderm microtubule-associated protein-like CG4... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..174
e-value: 5.1E-35
score: 123.0
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 4..175
NoneNo IPR availablePANTHERPTHR13720:SF9ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE ELP-1coord: 4..175
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig74contigP-littoralis_Contig74:72364..75281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig74.18.1mRNA_P-littoralis_Contig74.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig74 72364..75281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig74.18.1 ID=prot_P-littoralis_Contig74.18.1|Name=mRNA_P-littoralis_Contig74.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
SSGQIYVHDATDHYSLKATTRKPDDGSSITDVDFSTDKEALQATTSSKDL
LFFHTADGRQMTAKSKTKDITFETQTCPAGWMVQAAWPQGRPDLEPVSAD
RCTPAVVEGQAQLGPMLAAGYKTGQVEVYRYPCQNQGARSISATGHSTAA
SRVRFNADGRVLLSVGSDSRVVLQHSILPPLPPI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf