mRNA_P-littoralis_Contig1185.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.360e-60 Identity = 173/461 (37.53%), Postives = 246/461 (53.36%), Query Frame = 1
Query: 37 KLASLKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEY----EEDLQMIFKE-----LAPRERDSGAEEPTAIQRGRLAPAAVSRRPASKWE--REKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGV-VATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCPPPGQRAPPA 1362
KL+ LK +G + F +KA K G V ++ + + W L+ G EEE+ + + Q I L P++ P++ A AA R+ A +W+ R++A+Q +II +F +GSG PIERTR G E V+G+ P P +P CP+CP F+ Q IHV +H A G RL ++L + + PW G G W D TG A F +Q+ R +D DGF TD K + RGA+ RKRY +R KA + +LR Q+ AA++ ++ + PLQ+ V S + KWA DEA IV AA+ V LL K + WFP+ E+ LY +++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + KRRRSN KN+SVE+RLPKI RF ++ R L+Q P RAP A
Sbjct: 17 KLSELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRWKQARDRAAQ-----GVLGGNIINAFARGSGKPIERTRG-GVTEHVSGINFPPPAPERRIP---CPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQ-PWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGF-TDR--KVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQ-EPVRYRAPEA 463
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI) HSP 1 Score: 216 bits (550), Expect = 3.530e-59 Identity = 153/450 (34.00%), Postives = 235/450 (52.22%), Query Frame = 1
Query: 37 KLASLKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEYEEDLQMIFKELAPRERDSGAEEPTAIQRGRLAPAAVSRR---------PASKWEREKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGV-VATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVWVA--DFKTGRAEFGIQQRTTP-ID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCP 1335
KL++LK KG + Q+ ++K ++G +T + + W+LR G EE++ + + + PT +A +A +R PA++ + + AA +I SF GSG P+ RTR G E V+ V A+P P P VQCP+CP F+ Q +H+ H A +G+RL ++L + A +PWE G G + D TG A F +Q + P ID DGF + RRGA R RY +R KA I++LR ++ + + H+ P+Q+ VP++++ KW DE IV AA++V LL K + WFP AE+ L+ ++A+R+K LKVSTLWL + +++H+P D R +F+PS+RW KWA +V RRRSN K +S+E+RLP+I RF ++ R L++ P
Sbjct: 13 KLSALKAKGMILERQYEVIKKHVREGNSLTSEHWEAFDVAWDLRSSGVFSEEDWTTQVDGDISGI-------NSARPTLSSEHAVASSASGKRXXXXXXXXXPAARGAPNRGKRQREDAAKGSLNIYNSFAIGSGQPVLRTRA-GVQEYVSSVSFASPAP---APRVQCPHCPTTFVNAQGLGLHMKTNHSTANVFQGQRLQRMLGD-DAKGDVLPWERAGPGRCYHVKIDGITGAASFVLQPKRVPNIDLESDGFTPAE--PRSARRGAAKRNRYDFRFKAHVIQQLRILEEDRQALWQAEHLSPMQYLETHMKVPRTNISKWVKDEDEIVAFAADEVKQTLLAKQQPKRWFPAAERELFNRFLARRKKKLKVSTLWLTVTFRKLLEEHHPTDSRAAVFRPSFRWMQKWAKRHKVVPRRRSNLKAKSIEERLPRIQRFHRRFRQLIEEP 448
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE) HSP 1 Score: 213 bits (541), Expect = 8.040e-57 Identity = 171/461 (37.09%), Postives = 241/461 (52.28%), Query Frame = 1
Query: 37 KLASLKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEY----EEDLQMIFKE-----LAPRERDSGAEEPTAIQRGRLAPAAVSRRPAS--KWEREKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGVV-ATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCPPPGQRAPPA 1362
KL+ LK +G + F +KA K G V ++ + + W L G EEE+ + + Q I L P++ P++ A AA R+ A K R++A+Q +II +F +GSG PIERTR G E V+G+ P P +P CP+CP F+ Q IHV +H A G RL ++L + + PW G G W D TG A F +Q+ R +D DGF TD K + RGA+ RKRY +R K + +LR Q+ AA++ ++ + PLQ+ V S + KWA DEA IV AA+ V LL K + WFP+ E+ L +++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + KRRRSN KN+SVE+RLPKI RF ++ R L+Q P RAP A
Sbjct: 17 KLSELKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLEQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQ-----GVLGGNIINAFARGSGKPIERTRG-GVTEHVSGITFPPPAPERRIP---CPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQ-PWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGF-TDR--KVKETRGAVKRKRYDFRFKTHVVIQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLSNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQ-EPVRYRAPEA 463
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5KBV2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBV2_9PHAE) HSP 1 Score: 205 bits (521), Expect = 6.680e-55 Identity = 162/447 (36.24%), Postives = 230/447 (51.45%), Query Frame = 1
Query: 37 KLASLKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEYEEDLQMIFKELAPRERDS-GAEEPTAIQRGRLAP-----AAVSRRPASKWEREKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGV-VATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCP 1335
KLA LK +G + F +K K G V ++ + S W L+ +G +E E+ + + + R S +++ + RG AP AA + K +R K ++ S + +I +F GSG PIERTR G E V+G+ P P + C +CP + Q IHV +H A G RL ++L + + +PWEG G G W D TG A F +Q+ R +D DGF D E K RGA R+RY YR KA A+ +LR + AA++ ++ PLQ+ V S++ KWA DE IV AA+ V LL K + WFP+AE+ Y +++ +R++ LKVSTLWL T + V+ YP D R F+ S+RWA KWA ++ KR R N KN SVE+RLPKI RF + R L+Q P
Sbjct: 242 KLAELKGRGLILDRHFETIKTHVKAGNSVAKERWDAIESAWGLKQNGIFDEGEWIAQIDGEIQGITSSTRLSLSSQQDASSARGAAAPSQHPPAAAADTARRKVDRGKHARERASKGTLGDNIWNAFSIGSGQPIERTRG-GVKEFVSGISFPPPAPES---RRSCLHCPMTIVNEQGLGIHVRTQHSSANMSNGVRLRRMLWK-NLEGRVLPWEGAGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM-DRETKET--RGAPKRRRYDYRFKANAVNQLRILEDNAADLWKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQSKRWFPEAEKRPYKMFVERRKRKLKVSTLWLTTTCQKLVRDMYPGDQRAAAFRASFRWARKWAERHNLSKRGRINLKNRSVEERLPKIQRFHRLFRKLLQEP 680
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5JIJ5_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ5_9PHAE) HSP 1 Score: 203 bits (517), Expect = 1.660e-53 Identity = 162/447 (36.24%), Postives = 230/447 (51.45%), Query Frame = 1
Query: 37 KLASLKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEYEEDLQMIFKELAPRERDS-GAEEPTAIQRGRLAP-----AAVSRRPASKWEREKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGV-VATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCP 1335
KLA LK +G + F +K K G V ++ + S W L+ +G +E ++ + + + R S +++ + RG AP AA + K EREK ++ + + I +F GSG PIERTR G E V+G+ P P + CP+CP FM Q IHV +H A G RL ++L + + +PWE G G W D TG A F +Q+ R +D DGF D E K RGA R+RY YR KA A+ +LR + AA++ ++ PLQ+ V S++ KWA DE IV AA+ V LL K + WFP+AE+ LY +++ + + LKVSTLWL + V + YP D R F+ S+RWA WA R++ KRRR+N K +SVE+RLPKI RF + R +Q P
Sbjct: 17 KLAELKGRGLILDRHFETIKTHVKAGNSVAKERWDAIESAWGLKKNGIFDEGQWIAQIDGEIQGITSSTRLSLPSQQDASSARGAAAPSQHPPAAAAGTARRKVEREKHARERAAKGTLGGSICNAFSIGSGQPIERTRG-GVKEFVSGISFPPPAPES---RRSCPHCPMTFMNEQGLGIHVRTQHSSATMSNGVRLRRMLRK-NLGGRVLPWEEAGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM-DRETKEA--RGASKRRRYDYRFKANAVNQLRILEDNAADLCKEEERTPLQYLEDRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVEQCKGKLKVSTLWLTITFRELVGEMYPGDQRAAAFRASFRWARNWAKRRNLSKRRRTNLKFKSVEERLPKIRRFHRLFRKFLQEP 455
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5J6R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6R3_9PHAE) HSP 1 Score: 193 bits (491), Expect = 4.970e-50 Identity = 160/448 (35.71%), Postives = 228/448 (50.89%), Query Frame = 1
Query: 37 KLASLKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEYEEDLQMIFKELAPRERDSGAEEPTAIQRGRLAPAAVSRRPASK---WEREKASQLSRSAASAHQHII----TSFVKGSGGPIERTRNDGSVELVAGV-VATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCP 1335
KLA LK +G + F +K K G V ++ + S W L+ +G +E E+ + + + R + + A Q G R+ + W+R A QL R+ ++H + S + IERT G E+V+G+ P P + CP+CP F+ Q IHV +H A G RL + +L + +PWE G G W D TG A F +Q+ R +D DGF D E K RGA R+RY YR KA A+ +LR + AA+I ++ PLQ A V S++ KWA DE IV AA+ V LL K + WFP+AE+ LY +++ +R++ LKVSTLWL + V++ YP D R F+ S+RWA KWA ++ KRRR+N KN+SVE+RLPKI RF + R L+Q P
Sbjct: 17 KLAQLKGRGLILDRHFETIKTHVKAGNSVAKERWDAIESAWGLKQNGIFDEGEWIAQIDGEIQGITSSTRLPLSSQQXARQ-GESCERHFGRQHLQRVLDWQRTTAPQL-RATDTSHGSLNPLHGNSALSHRTEQIERTLG-GVKEVVSGISFPPPAPES---RRSCPHCPMTFVKEQGLGIHVRTQHSNANMSNGVRL-RPMLRKNLEGRVLPWEEAGPGRCWHVKVDDATGAASFVLQRKRFLGLDLESDGFM-DRETKET--RGAPKRRRYDYRFKANAVNQLRILEDNAADIWKEEERTPLQCLADRLKVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKMFVERRKRKLKVSTLWLTITFRKLVREMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHRLFRKLLQEP 454
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 189 bits (479), Expect = 2.850e-49 Identity = 122/293 (41.64%), Postives = 168/293 (57.34%), Query Frame = 1
Query: 502 VQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCPPPGQRAPPA 1362
+ CP+CP F+ Q IHV +H A G RL ++L + + PW G G W D TG A F +Q+ R +D DGF E K + RGA+ RKRY +R KA + +LR Q+ AA++ ++ + PLQ+ V S + KWA DEA IV AA+ V LL K + WFP+ E+ LY +++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + KRRRSN KN+SVE+RLPKI RF ++ R L+Q P RAP A
Sbjct: 62 IPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQ-PWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGFT---ERKVKEARGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAKQQPKRWFPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQ-EPVRYRAPEA 349
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5K6P0_9PHAE (C2H2-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P0_9PHAE) HSP 1 Score: 181 bits (460), Expect = 2.960e-48 Identity = 164/457 (35.89%), Postives = 228/457 (49.89%), Query Frame = 1
Query: 49 LKHKGALTTEQFSLLKAKAKDG-LVTEQVLQNLSSLWNLRCDGSVEEEEY----EEDLQMIFKE-----LAPRERDSGAEEPTAIQRGRLAPAAVSRRPAS--KWEREKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGV-VATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCPPPGQRAPPA 1362
LK +G + F +KA K G V ++ + + W L+ G EEE+ + + Q I L P++ P++ A AA R+ A K R++A+Q +II +F +GSG PIERTR G +E V+G+ P P +P CP+CP F+ Q IHV +H A G RL ++L + + PW G G W D TG A F +Q+ R +D DGF TD K + RGA+ K Y +R KA + +LR Q+ AA++ ++ + PLQ+ V S + KWA DEA IV AA+ V LL K + KRRK LKVSTLWL + V++++P+D R F S+RWA KWA + KRRRSN KN+SVE+RLPKI RF ++ R L+Q P RAP A
Sbjct: 29 LKQRGLILDRHFETIKAHVKAGNSVAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGITSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQ-----GVLGGNIINAFARGSGKPIERTRG-GVIEHVSGINFPPPAPERRIP---CPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQ-PWGEAGPGRCWHVKVDGATGAASFVLQRKRFRDLDLESDGF-TDR--KVKETRGAVKCKLYDFRFKAYVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAADDVKKTLLAK-----------------HQPKRRK-LKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQ-EPVRYRAPEA 453
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5KWF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWF5_9PHAE) HSP 1 Score: 186 bits (473), Expect = 5.590e-48 Identity = 147/410 (35.85%), Postives = 213/410 (51.95%), Query Frame = 1
Query: 142 LSSLWNLRCDGSVEEEEYEEDLQMIFKELAPRERDS-GAEEPTAIQRGRLAP-----AAVSRRPASKWEREKASQLSRSAASAHQHIITSFVKGSGGPIERTRNDGSVELVAGVVATPLPTTGVPTVQCPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVW--VADFKTGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCP 1335
+ S W L+ +G +E E+ + + + R S +++ + +RG AP AA + K +R K ++ + + +I +F GSG PIERT G V+ A ++ P P CP+CP F+ Q I+V +H A G RL ++L + + +PW G G W D TG A F +Q+ R +D DGF D E K RGA R+RY R KA A+ +LR + AA + ++ PLQ+ V S++ KWA DE IV AA+ V LL K + WFP+AE LY + + +R++ LKVST+WL T + V+ YP D R F+ S+RWA KWA ++ KRRR+N KN+SVE+RLPKI RF + R L+Q P
Sbjct: 7 IESAWGLKQNGIFDEGEWIAQIDGEIQGITSSTRLSLSSQQDASSERGAAAPSQHPPAAAAGTARRKVDRGKHARERAAKGTLGGNICNAFSIGSGKPIERTC--GGVKEFASGMSFP-PPARESRRSCPHCPITFVNEQGLGIYVRTQHSSANMSNGVRLRRMLRK-NLEGRVLPWGEAGPGRCWHVKVDDATGAASFVLQRKRFLDLDLESDGFM-DRETKET--RGAPKRRRYDNRFKANAVNQLRILEDNAANLWKEEERTPLQYLEDRLRVHYSNIVKWAKDEKAIVAAAADDVKKSLLAKQQPKRWFPEAETRLYKMSVERRKRKLKVSTVWLTTTFRKLVRDMYPGDQRAAAFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHRLFRKLLQEP 409
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Match: A0A6H5KCI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI3_9PHAE) HSP 1 Score: 179 bits (454), Expect = 2.810e-47 Identity = 120/317 (37.85%), Postives = 173/317 (54.57%), Query Frame = 1
Query: 415 PIERTRNDGSVELVAGVVATPLPTTGVPTVQ----CPYCPKKFMCTQASAIHVGMRHPQAKKDEGERLLKLLLEPSASVTKMPWEGVGMGLVWVADFK--TGRAEFGIQQ-RTTPID---DGFATDDEGKGEGRRGALVRKRYSYRQKAVAIERLRECQQQAAEIEEKYHMGPLQFAAQVAGVPQSDLHKWAGDEAVIVGKAAEKVTSGLLGKSAKRSWFPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLMFKPSWRWAGKWANERSIVKRRRSNSKNESVEQRLPKIGRFLKKLRALMQCP 1335
PIER R G EL++G+ P PT + CP+CP F+ Q IHV +H A G RL ++L + + +PWE G G W F TG A F +++ R +D DGF + K + RGA R+RY +R KA A+ +LR + A ++ ++ PL F +P S++ KWA +E +V AA+ V LL K + WFP+AE+ LY ++ +R++ LKVSTLWL + V++ P D R F+ S+RWA KWA ++ RRR+N KN+SVE+R PKI RF + R L+Q P
Sbjct: 109 PIERARG-GVKELISGISFPP------PTPESRRSCPHCPMTFVNEQGLGIHVRTQHSSANMSNGVRLRRMLRKDEQG-SVLPWEAAGPGRCWHVKFDHATGTASFVLRRKRFLDLDLDSDGFM---DRKPKDTRGAPKRRRYDFRFKAHAVNQLRILEDNAEDLWKEEQRTPLLFFEDRLKIPYSNIVKWAKNEKELVAAAADDVKKSLLAKQQPKRWFPEAEKRLYKGFVERRKRKLKVSTLWLTITFRKLVREMNPGDQRAASFRASFRWARKWAKRHNLSNRRRTNLKNKSVEERFPKIQRFHRLFRELLQEP 414 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1185.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1185.12.1 >prot_P-littoralis_Contig1185.12.1 ID=prot_P-littoralis_Contig1185.12.1|Name=mRNA_P-littoralis_Contig1185.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=471bp MDAAAVLALKSKLASLKHKGALTTEQFSLLKAKAKDGLVTEQVLQNLSSLback to top mRNA from alignment at P-littoralis_Contig1185:16866..18595- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1185.12.1 ID=mRNA_P-littoralis_Contig1185.12.1|Name=mRNA_P-littoralis_Contig1185.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1730bp|location=Sequence derived from alignment at P-littoralis_Contig1185:16866..18595- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1185:16866..18595- >mRNA_P-littoralis_Contig1185.12.1 ID=mRNA_P-littoralis_Contig1185.12.1|Name=mRNA_P-littoralis_Contig1185.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1413bp|location=Sequence derived from alignment at P-littoralis_Contig1185:16866..18595- (Pylaiella littoralis U1_48)back to top |