prot_P-littoralis_Contig739.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig739.4.1
Unique Nameprot_P-littoralis_Contig739.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1004
Homology
BLAST of mRNA_P-littoralis_Contig739.4.1 vs. uniprot
Match: A0A6H5KF31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF31_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 8.680e-8
Identity = 125/416 (30.05%), Postives = 173/416 (41.59%), Query Frame = 0
Query:  532 WQGAEESLRWTQPWGRTA--TTAPGTSTAGAVTPHPGHQA--------RRRGAHSSVGCNT-----PAFGGSSAASISRSSPCDPKTSNEMAAGAEEVDIPSSSLSPARPQQELDSYNPFHEEDLVSIAVVSSGINIPKNVS--------SPPPS----VQNTGSTRPGFVVQQQLAAGAAGGLPFA--SSSQPSIKSRTSGRQTSRSPSFFSSSTPMPSSASSPGATGTXXXXSRSSHETTTR---AEAEQGATSGGRENCDGRGGASATTPLLARGQGDVVSLSPWPKPPSSPASSVRSHPQRPSVSRAIGAASGNGQRHRDEQQSTPKAPSVQLLAPPSLDTSPSRTSHSGPPEDNPIHAGVRGTPVLENGTRAASRPPPVFSPSRAGDEDEE-EDSFGGPGLTVEAYMAKRH 914
            WQGA+ESLRWTQPWG  A   TA     +  V   P H          +R   H   G        P+ GG+S++  S + P + + S  +   AE VD+PSSSL    P  E DS+NPF + DLV I   S G   P NVS        SPP       + + + R G  V+   A  ++G  P A  +++ P++ S +S           +S+ P  ++ +  GA       S S     TR   A   QG    GR    G G A     + ++ Q                  S     + PS+ R   A+S  G     E ++       +L    S+ T+    S     +   I +  R TP  E+G R     P         DE E+ EDS GGPGLTVEAYMA++H
Sbjct:  284 WQGADESLRWTQPWGGEAGPATAAAAGASSRVRRSPRHDPETPRGVLEQRNSCHGGSGGEREERFPPSTGGASSSFASSAVPYNNRNSQRVVDDAE-VDMPSSSL----PLCEADSFNPFQDADLVPITTGSIGAKAPGNVSTSRRQGSRSPPAPNTFPAEQSATMRSGLAVRP-AARDSSGKSPIADATAAAPTVSSSSS-----------TSTRPTSTAGTRGGAVAGEPSFSGSHTRMITRKAKAGLRQGDGGAGRTQASGAGDAPVGHMVQSQ-QXXXXXXXXXXXXXXXXXXSGNPFSRGPSMDRGDPASSVGGVHTAAESKAN-----CELSHDVSVRTNRRNVSGLDQAQAGLIRSDGR-TPHEESGKRK----PTSADVGVIEDEIEDYEDSLGGPGLTVEAYMAEKH 671          
BLAST of mRNA_P-littoralis_Contig739.4.1 vs. uniprot
Match: D8LHD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD9_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 6.870e-7
Identity = 58/149 (38.93%), Postives = 76/149 (51.01%), Query Frame = 0
Query:  528 GDESWQGAEESLRWTQPWGRTATTAPGTSTA-GA---VTPHP--------GHQARRRGAHSSVGCN-----TPAFGGSSAASISRSSPCDPKTSNEMAAGAEEVDIPSSSLSPARPQQELDSYNPFHEEDLVSIAVVSSGINIPKNVSS 659
            G+ SWQGA+ESLRWTQPWG    T P T+ A GA   V   P        G   +R   H   G       + + GG+S++  S + P + + S  +A  AE VD+PSSSL    P  E DS+NPF + DL  I   S G   P N ++
Sbjct:   63 GESSWQGADESLRWTQPWG--GETGPATAAAVGAPSRVRQSPRNDPEIPRGVLEQRNSCHDGSGGERVEPFSSSAGGASSSFKSSAVPHNNRNSQRVADDAE-VDMPSSSL----PLCEADSFNPFQDADLAPITTGSIGAKAPGNATN 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig739.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF31_9PHAE8.680e-830.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD9_ECTSI6.870e-738.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 917..931
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..854
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..751
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 959..973
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..1003
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..603
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..676
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig739contigP-littoralis_Contig739:46936..57843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig739.4.1mRNA_P-littoralis_Contig739.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig739 46936..57843 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig739.4.1 ID=prot_P-littoralis_Contig739.4.1|Name=mRNA_P-littoralis_Contig739.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1004bp
MDRTTRTSSSGRRRNVVKPGRIDTILGHDRQGLRLNFGLAMHQQRSYTVA
ASRSASGGGGDGGGSGHRGSTRGEATTNADSSEPLTHSGSLSQSQGAYSH
GMFPSQGMSLSQGSVGPLGHQQSQSETAGFGMSQPSPDILAPYASTHHSH
DGGGFGGGRPTLRGVSGADGARNGGREPQPAQSLRSASSAGNTGHRGVND
SRLTSSVASAKARRPQPLPRDVERRRGQAQRPSSQSSRSGKGVDVTEGGA
GTTAASSTSRKGFGSETAAVQAFERLLSEQFRTQVMSELSGLRTLVETTR
EAFADQTESNSKISVASLELQQELQTTNNVVRATRDGSSKALQLLETTVP
NAFQSLETRLRRTEQTLAGVTEMVAATLASTKEVVAASTAAASAACAAAA
SMSEALALGKKDSRSINSGRLEGAPQLSLQSDQQQQQQRPNVEQHRPHQL
ESKSKYVPKPTGLSATGGHQQRQPGSRKREGDGQQQEHQHPSPAMHHALH
PPQGQQRSSPGLDAWHSPQRVDCGRGEGDESWQGAEESLRWTQPWGRTAT
TAPGTSTAGAVTPHPGHQARRRGAHSSVGCNTPAFGGSSAASISRSSPCD
PKTSNEMAAGAEEVDIPSSSLSPARPQQELDSYNPFHEEDLVSIAVVSSG
INIPKNVSSPPPSVQNTGSTRPGFVVQQQLAAGAAGGLPFASSSQPSIKS
RTSGRQTSRSPSFFSSSTPMPSSASSPGATGTTSAASRSSHETTTRAEAE
QGATSGGRENCDGRGGASATTPLLARGQGDVVSLSPWPKPPSSPASSVRS
HPQRPSVSRAIGAASGNGQRHRDEQQSTPKAPSVQLLAPPSLDTSPSRTS
HSGPPEDNPIHAGVRGTPVLENGTRAASRPPPVFSPSRAGDEDEEEDSFG
GPGLTVEAYMAKRHSSCGGSTRKNATSTKREATGAADPDGVSAPTEIPGA
APLTRATARRRQTAPTPSSVAGNSRGGGKRARTGTGERESNGDSWLVGGG
SGW*
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