mRNA_P-littoralis_Contig731.14.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.520e-22 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 43 GMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQV 420
G+ RNG I + LRWLAGGSI+E +RS AY + V++A+N C L +WP E+ + A FR +S ++R+C+GA+D + ++M KP +E P+ +++GHKK G+N QV
Sbjct: 2 GLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPE-GEDAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 126
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 6.330e-22 Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 1
Query: 4 LLRPRLYLASRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQ 417
+LRP+L G RNG I L LR+LAGGS+ EV ++S AYA+V V+DAIN R+L +WP ++ A +R +S N +IRRC+GA+D + +++ P + H P F+SGHKK G+N Q
Sbjct: 87 ILRPKLQ-RDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPY-GDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ 222
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6H5J5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V5_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 4.020e-21 Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 43 GMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGF--REKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQ 417
G NG I AL LRWLAG + + S A+A + LDAIND RLR++WPR E A F R + +++RC+GA++ + ++ KKP EH P RFFSGHK VG+N Q
Sbjct: 24 GRGHNGTIAGEWALASTLRWLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDYGRLRIKWPRKERELQAKAQRFAARRSQLDPVLKRCVGALNGLLVRRKKPSITEHPYPHRFFSGHKMTVGMNYQ 150
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 7.840e-17 Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 7 LRPRLYLASRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQV 420
LRP L ++ G+ RNG I + LRWLAGGSI+E +RS AY + V++A+N C L +WP E+ + + + ++R+C+GA+D + ++M KP +E P+ +++GHKK G+N QV
Sbjct: 88 LRPALQQNEKT-GLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPE-GEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 223
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6A3QK27_9STRA (DDE Tnp4 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QK27_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.460e-16 Identity = 51/141 (36.17%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 4 LLRPRLYLASRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREH--VCPDRFFSGHKKCVGLNMQV 420
LL P L+ + + + G I AL LR+ AGGS+H++RRV G S+++ Y ++ V+DAIN LR+ +PR+ R AA F+ S + C+G VD ++ P E V P R++SGH +C G+N+Q
Sbjct: 63 LLAPTLHRSPHA--WVQRGYISVDNALQLTLRYFAGGSMHDIRRVAGVSKASFYRILWLVVDAINAVSELRLVFPRSPTAREASAAAFKTLSAEGVFSGCVGCVDGWLCAIRAPRLAETGGVGPQRYYSGHYRCYGVNVQA 201
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6A3MSZ9_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3MSZ9_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.520e-16 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 91 CLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQV 420
CLRWL+GGS H+VR + G S SA Y + V+DAI L++++P + + + +VA F + S + +++ C+GAVD ++ P K+E FF GH + G+N+QV
Sbjct: 97 CLRWLSGGSYHDVREISGVSVSAFYTSIHEVVDAITAHAELQLQFPTSVQAQRRVAKAFEQLSNSHVMKGCVGAVDGWLCPIRVPQKKEVSRVRSFFCGHYQRYGVNVQV 206
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A225UUP6_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UUP6_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.200e-14 Identity = 49/129 (37.98%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 34 RSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQV 420
RSRG+ P P L L WLAGGS H +R ++G + + Y +V V+ AIND +L R+P T +E AA FR S + +I C+G +D ++ P K E FFS H + GLN+Q
Sbjct: 102 RSRGIP---PPSPATMLQCALSWLAGGSYHHIRVIMGVNTATFYCIVYRVMFAINDSDKLAPRFPSTPQELSASAAAFRSCSNHGVIENCIGVIDGWFCPVRVPRKDECGRILSFFSRHYQKYGLNVQA 227
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: W2QNU6_PHYPN (DDE Tnp4 domain-containing protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QNU6_PHYPN) HSP 1 Score: 76.3 bits (186), Expect = 1.780e-13 Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 61 PIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQV 420
PI P L CLRWL GGS H++R G S SA YA + V+DAI D L++++P T + A F S + +++ C+ A+D ++ P K E FFSGH + G+N+Q
Sbjct: 87 PISPVNKLHMCLRWLGGGSYHDIRVTSGVSVSAFYASIHEVVDAIVDHPDLQLQFPSTIATQRYAAKHFENLSSSRVMKGCVVAIDGWLCPIRVPKKDEVSRVRSFFSGHYRRYGVNVQA 206
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6G0MZL1_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MZL1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 3.050e-13 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 91 CLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCVGLNMQV 420
CLRWL+GGS H+VR + G S A Y + V+ AI L++++P T + + A F S + +++ C+GAVD ++ P K+E FFSGH + G+N+Q
Sbjct: 97 CLRWLSGGSYHDVREISGVSVPAFYRSIHEVVGAIIAHPELQLQFPTTVQAQRHAAKAFERVSNSRVMKGCVGAVDGWLCPIRVPQKKEVSRVRSFFSGHYQRYGVNVQA 206
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 4.280e-13 Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 7 LRPRLYLASRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYALVGAVLDAINDCRRLRVRWPRTAEERWKVAAGFREKSPNFIIRRCLGAVDCVTIKMKKPGKREHVCPDRFFSGHKKCV 402
LRP L+ + G+ R G I + LRWLAGGSI+E +RS AY + V++A+N C L +WP + ++R+C+GA+D + ++M KP +E P+ +++GH+K V
Sbjct: 88 LRPALH-KNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig731.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig731.14.1 >prot_P-littoralis_Contig731.14.1 ID=prot_P-littoralis_Contig731.14.1|Name=mRNA_P-littoralis_Contig731.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp GLLRPRLYLASRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSback to top mRNA from alignment at P-littoralis_Contig731:99515..99943+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig731.14.1 ID=mRNA_P-littoralis_Contig731.14.1|Name=mRNA_P-littoralis_Contig731.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=429bp|location=Sequence derived from alignment at P-littoralis_Contig731:99515..99943+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig731:99515..99943+ >mRNA_P-littoralis_Contig731.14.1 ID=mRNA_P-littoralis_Contig731.14.1|Name=mRNA_P-littoralis_Contig731.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=429bp|location=Sequence derived from alignment at P-littoralis_Contig731:99515..99943+ (Pylaiella littoralis U1_48)back to top |