mRNA_P-littoralis_Contig722.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: D8LFH9_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH9_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 9.150e-21 Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDEV 294
E R+AL IGG +EV TPSG ID + + V+EV WK+G+GQV+AY SHYP +RLHLF I GD KY E+A+SVC + + TF++V
Sbjct: 48 ESSAREALASLIGGEREVETPSGFIDKPS-DAVIEVKYHNRWKDGLGQVLAYQSHYPRLARRLHLFAHI-GDKDTDKYFEMAKSVCYAHAVKVTFEKV 143
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: K7X2U1_9NOST (Uncharacterized protein n=1 Tax=Anabaena sp. 90 TaxID=46234 RepID=K7X2U1_9NOST) HSP 1 Score: 90.1 bits (222), Expect = 1.910e-20 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDEVMS 300
E +VRD LK ++GG+ EV TP+G IDLLT E++EV ++WK G+GQV+ Y YP KRLHLFG E + + + ++A S C + + +FD+V S
Sbjct: 91 EFIVRDNLKSQLGGLTEVTTPAGRIDLLTDTEIIEVKRVKDWKAGLGQVLVYSGFYPEHQKRLHLFGSAEYEKQIA---DIAAS-CLVFDVLVSFDQVTS 186
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.430e-19 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESV 255
E +VRDAL +GG EV TPSG ID+L+ EV+EV +R WK+G+GQV+AY SHYP +RLHLF GD KY ELA+++
Sbjct: 284 ECVVRDALASLVGGTTEVETPSGYIDVLSETEVIEVKYYRQWKDGLGQVLAYQSHYPRLARRLHLFAHT-GDRDTDKYCELAKAI 367
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: A0A1Y0RHW2_9CYAN (Uncharacterized protein n=1 Tax=Nostocales cyanobacterium HT-58-2 TaxID=1940762 RepID=A0A1Y0RHW2_9CYAN) HSP 1 Score: 87.8 bits (216), Expect = 1.920e-19 Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDEV 294
E V D L ++GG++EV TP G IDLLT E++EV N ++WK IGQV+AY +P KRLHLFG + A ++C+ GI TF+EV
Sbjct: 109 EDTVCDRLHSQLGGLREVETPVGRIDLLTDTEIIEVKNIKDWKAAIGQVLAYSGFFPEHRKRLHLFGK-----KGEMVTSTAVTICAELGITVTFEEV 201
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: A0A1Z4J7N4_9CYAN (Uncharacterized protein n=1 Tax=Scytonema sp. HK-05 TaxID=1137095 RepID=A0A1Z4J7N4_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 8.620e-19 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDEVMSD 303
E+ VRD LK +GG EV+T SG IDLL+ E++E+ F NWKE +GQ+ Y + +P+ KR+HLFG A K + E+ C + + T EV +D
Sbjct: 96 EQQVRDNLKAILGGQSEVMTSSGRIDLLSDREIIEIKQFNNWKEALGQIFTYSAFFPTYNKRIHLFG----SATALKKLPDIEAACLPFEVLVTGQEVEND 192
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: UPI0006982661 (MarR family transcriptional regulator n=1 Tax=Aliterella atlantica TaxID=1827278 RepID=UPI0006982661) HSP 1 Score: 84.3 bits (207), Expect = 3.560e-18 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDEVM 297
E+ VRD L ++GG+ EV TP+G IDLLT +E+ EV ++WK +GQ++ Y S YP KRLHLFG R + + E+ ++GI T +EV+
Sbjct: 100 EKAVRDRLHAQLGGLVEVATPAGRIDLLTNSEITEVKAIKDWKAALGQILVYSSFYPQHQKRLHLFGT----ARELEALVNIEAAIISFGIRVTGEEVV 194
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: UPI001D2F14B2 (hypothetical protein n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001D2F14B2) HSP 1 Score: 83.2 bits (204), Expect = 4.130e-18 Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDE 291
E RD L + G EV PSG ID+LT N+++EV + + W +GQVI YG HYP+ KR+HLFG +E + S + L + C I ATF+E
Sbjct: 63 ESYYRDKLAKSLNGQTEVRVPSGRIDILTSNQIIEVKHIKKWNAALGQVITYGYHYPNHQKRIHLFG-VENN---SSKILLIQKQCQEQNIIATFEE 155
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: A0A2P8QK91_9CYAN (Uncharacterized protein n=2 Tax=Chroococcidiopsidales TaxID=1890505 RepID=A0A2P8QK91_9CYAN) HSP 1 Score: 83.6 bits (205), Expect = 7.070e-18 Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 4 RMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFDEV 294
R +RD L ++GG+ EV+TP+G IDLLT +++E+ + ++WK +GQ +AY YP KR+HLFG R S E+ C +G+ T +EV
Sbjct: 99 RKIRDRLHAQLGGLVEVVTPAGRIDLLTDTQIIEIKSIQDWKAALGQTLAYSGFYPEHQKRIHLFGSAFELKRLSDI----EAACLCFGVKVTGEEV 191
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: K9VSH3_9CYAN (Uncharacterized protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9VSH3_9CYAN) HSP 1 Score: 84.3 bits (207), Expect = 9.580e-18 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLFGPIEGDTRASKYVELAESVCSTYGIHATFD 288
E+ + L++ IGG EVLTP+GSIDLLT ++++EV + +NWK IGQV+ Y ++YPS KR+HLFG T +++ + C I T++
Sbjct: 155 EKWYVNQLQVEIGGETEVLTPAGSIDLLTTSQLIEVKHIKNWKTAIGQVLVYSAYYPSHEKRIHLFG-----TCHESFLDTVKQHCQRQNIVLTWE 245
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 2.760e-17 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 ERMVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYGSHYPSRTKRLHLF 198
E +VRDAL +GG EV TPSG ID+L+ EV+EV +RNWKEG+GQV+ Y SHYP ++RLHLF
Sbjct: 718 ECVVRDALAFVVGGTTEVETPSGYIDVLSETEVIEVKYYRNWKEGLGQVLPYQSHYPRLSRRLHLF 783 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig722.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig722.3.1 >prot_P-littoralis_Contig722.3.1 ID=prot_P-littoralis_Contig722.3.1|Name=mRNA_P-littoralis_Contig722.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp MVRDALKIRIGGMQEVLTPSGSIDLLTINEVVEVMNFRNWKEGIGQVIAYback to top mRNA from alignment at P-littoralis_Contig722:14984..15286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig722.3.1 ID=mRNA_P-littoralis_Contig722.3.1|Name=mRNA_P-littoralis_Contig722.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=303bp|location=Sequence derived from alignment at P-littoralis_Contig722:14984..15286+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig722:14984..15286+ >mRNA_P-littoralis_Contig722.3.1 ID=mRNA_P-littoralis_Contig722.3.1|Name=mRNA_P-littoralis_Contig722.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=297bp|location=Sequence derived from alignment at P-littoralis_Contig722:14984..15286+ (Pylaiella littoralis U1_48)back to top |